Factsheet for TraesCS3D01G426700.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G469100.2	Wheat	cytosol	94.74	96.27
TraesCS3A01G433300.2	Wheat	nucleus	90.95	90.62
HORVU3Hr1G094860.7	Barley	cytosol, nucleus, plastid	83.99	81.3
EES01985	Sorghum	nucleus	66.87	64.73
Os01t0923600-02	Rice	nucleus	64.79	60.36
Zm00001d042313_P004	Maize	nucleus	63.94	58.63
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	37.41	39.23
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	37.65	38.99
KRH15615	Soybean	cytosol	14.79	38.17
VIT_14s0036g00610.t01	Wine grape	plastid	6.48	35.81
VIT_01s0010g03850.t01	Wine grape	nucleus	39.73	33.57
KRH58784	Soybean	nucleus	40.22	33.47
KRH42689	Soybean	cytosol	39.24	33.26
Solyc05g015650.2.1	Tomato	nucleus	37.78	33.05
KRH31521	Soybean	nucleus	36.31	32.64
KRG97392	Soybean	nucleus	37.78	32.12
PGSC0003DMT400084738	Potato	cytosol	26.53	31.73
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	43.64	31.57
Solyc12g035520.1.1	Tomato	nucleus	36.92	31.04
Bra004217.1-P	Field mustard	nucleus	37.65	30.89
TraesCS2D01G282800.6	Wheat	nucleus	38.88	30.87
Bra034007.1-P	Field mustard	nucleus	37.9	30.63
Bra004096.1-P	Field mustard	nucleus	36.43	30.63
AT1G67310.1	Thale cress	cytosol	38.02	30.61
CDY07431	Canola	nucleus	36.06	30.57
CDY12637	Canola	nucleus	38.39	30.37
CDY51184	Canola	nucleus	37.9	30.24
CDY01799	Canola	nucleus	37.29	29.76
CDY28897	Canola	nucleus	35.33	29.61
TraesCS2D01G169900.1	Wheat	cytosol	30.68	24.46
TraesCS2D01G237300.2	Wheat	cytosol	26.89	24.26
CDX96099	Canola	nucleus	37.16	24.17
TraesCS4D01G304500.3	Wheat	cytosol	29.58	22.7
Bra004218.1-P	Field mustard	nucleus	0.24	0.68

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048
InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS
InterPro:Ig-like_fold	InterPro:Ig_E-set	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF03859	PFAM:PF13637
PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF8
SMART:SM00015	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296	EnsemblPlantsGene:TraesCS3D01G426700
EnsemblPlants:TraesCS3D01G426700.5	TIGR:cd00102	TIGR:cd00204	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:-:539904601..539910054

Molecular Weight (calculated)

92516.6 Da

IEP (calculated)

7.290

GRAVY (calculated)

-0.508

Length

818 amino acids

Sequence
(BLAST)

001: MQQQQGLDIQ NLQREVKTRW LKPREVLDIL RNCELFGIQN RTPQRPPSGS WFLFNRRVHR FFRNDGYQWQ KKRNGKSGNE AHEYLKVNNV KALNCYYARA
101: ENSPTFMRRI YWMLEPAYEH IVLVHYRDVL EGSISVSALN GSPTSYQNGS ASRADAHSSP GLTSEIIAPR LLSRSPGSAE EVSSQILTIN NESNDTSQFD
201: WRRMLEMQLS LENKERHDVN TGEVLPNHDP NPMPGIQNEE FDTGTNLADI FYELEEFSED NRTEGSQPYR DPIDVIRNSA PVTVDENQWF HIHEVSPEWA
301: FCSESAKVVI AGDFPSNILW VLFGDVKVPA EIVQQGVIRC YTPSYLGAGK VRMCMLDENG KPCTQDREFG FVEKPTNTMI IGNGKPYSEA REFEFQQRPT
401: KSDNELLLLL NYVQMLFDSH GCELFSKFRL PLPNVQSGFP VNPSEIIGRT CEQLDHENAV NCIMEVMLNS KFEDWLSSKF EQNSEGEYLL PKQYHGVIHT
501: IAALGYDWAL KPLLNNGVPI NYRDANGWTA LHWAARFGRQ QMVAVLFAAG AAVGALSDPT AEDPAAKTPA SIASAYGFIG ISAFLSEAEL TSTLHSLESQ
601: ENGKPVDHNG GVSTSSAVDR VSDKCAHVDG GTDDQLALRD SLGAIRNAVQ AAGCIQATFR VFSLKKKKQK ALQNGDSSAS PSMLERAALS IQKNFRCWKK
701: RKEYQKVRKN VIKIQARFRA HRERNKYKEL LQSVGILEKI MLRWFRKGVG LRGINSRAMP IDQDEEEDIV KVFRKERVET AVSEAVSRVS AIVGCPVARL
801: DYRRMLEWHQ QAKIGHGK

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.