CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042313_P004	Maize	nucleus	86.27	81.73
TraesCS3B01G469100.2	Wheat	cytosol	64.73	67.95
TraesCS3A01G433300.2	Wheat	nucleus	65.92	67.84
TraesCS3D01G426700.5	Wheat	nucleus	64.73	66.87
Os01t0923600-02	Rice	nucleus	68.64	66.06
HORVU3Hr1G094860.7	Barley	cytosol, nucleus, plastid	64.73	64.73
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	40.35	43.16
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	37.87	41.03
KRH15615	Soybean	cytosol	15.38	41.01
VIT_14s0036g00610.t01	Wine grape	plastid	6.98	39.86
VIT_01s0010g03850.t01	Wine grape	nucleus	43.08	37.6
Solyc05g015650.2.1	Tomato	nucleus	41.42	37.43
KRH42689	Soybean	cytosol	42.37	37.1
KRH58784	Soybean	nucleus	42.96	36.93
KRH31521	Soybean	nucleus	39.41	36.59
OQU81398	Sorghum	nucleus	42.72	36.28
PGSC0003DMT400084738	Potato	cytosol	29.35	36.26
Solyc12g035520.1.1	Tomato	nucleus	40.83	35.46
KRG97392	Soybean	nucleus	40.35	35.45
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	46.98	35.1
AT1G67310.1	Thale cress	cytosol	40.95	34.06
Bra034007.1-P	Field mustard	nucleus	40.71	33.99
Bra004217.1-P	Field mustard	nucleus	40.0	33.9
CDY07431	Canola	nucleus	38.7	33.89
Bra004096.1-P	Field mustard	nucleus	38.93	33.81
CDY51184	Canola	nucleus	40.83	33.66
CDY28897	Canola	nucleus	38.46	33.3
CDY12637	Canola	nucleus	40.59	33.17
CDY01799	Canola	nucleus	39.88	32.88
CDX96099	Canola	nucleus	39.88	26.79
KXG36730	Sorghum	nucleus	32.43	26.6
EER94762	Sorghum	nucleus	31.01	25.59
OQU93088	Sorghum	mitochondrion	30.06	25.55
OQU91909	Sorghum	cytosol	30.3	25.05
KXG36244	Sorghum	nucleus	26.75	24.73
Bra004218.1-P	Field mustard	nucleus	0.24	0.68

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	EntrezGene:8079812	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	UniProt:C5XGC6	InterPro:CG-1_dom	ncoils:Coil	EnsemblPlants:EES01985
ProteinID:EES01985	ProteinID:EES01985.1	GO:GO:0001077	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	GO:GO:0045944	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559
InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold
InterPro:Ig_E-set	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859	PFAM:PF13637
PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF8
SMART:SM00015	SMART:SM00248	SMART:SM01076	EnsemblPlantsGene:SORBI_3003G407200	SUPFAM:SSF48403	SUPFAM:SSF52540
SUPFAM:SSF81296	UniParc:UPI0001A85198	RefSeq:XP_002456865.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:71482355..71489364

Molecular Weight (calculated)

95225.2 Da

IEP (calculated)

7.353

GRAVY (calculated)

-0.477

Length

845 amino acids

Sequence
(BLAST)

001: MQQQPQQQGL DIDKLQQVVK TRWLKPQEVL KILQNHELFT ISHKTPQKPQ SGSWFLFNRR VLRYFRSDGF EWQKKKNGKT INEAHERLKV DNVDALNCYY
101: ARGDKNPTFQ RRIYWMLDPA YEHIVLVHYR DVLEGSISVS ARNDSSTSNQ NGSASRAEVH SSPGWTSELI VQCPNSCSPG SAEEVSSRTS ASESDWIQHK
201: AALRKLKMQL SLEDKEDCDV NAEEVPANNA PIILPGIQNE ELDTSRNHDD IFDVLDFNED RINGTGTHSC PSAIDVLKNS DTWLEEDQLE AILHPACMTL
301: TENQWFKIHE ISPESAFSSE STKVIIVGDF LCNPPHSSWE LLFGDVKVPV EIIQQGVIRC HTPCLNAGKV RMCLVDGNGK SCSEAREFEF LEKPTKGMID
401: GNRNPCNEAR DSKIHQIPTK SSDELSLLLH YVQMLFDGHA CGLFSNFSLP LPNLGCEFQI NQMDIIKKTY EQLDPENTVN SVMEALLNDK FKQWLSSKCE
501: QNIDGDHFLP KQYHSIIHMI AALGYVLALK PLLSSGVPIN YRDANGWTAL HWAARFGRED MVVALLAAGA AAGALSHPTS EDPAAKTPAS IALAYGFKGL
601: SAFLSEAQLT THLDSIESKE NGKPDSREGG ICRAVDRISD KSSHVHGGTD DQLALKDSLG AVRNAVQAAG RIQAAFRIFS FKKKKEMALQ NRNSCFLSIS
701: ETEAVSLSHG MLEKAALSIQ KNFRCWKKRK EFLRIRNNVV RIQARVRAHQ ERKKYKELLS SVGVLEKVMI RWYRKGVGLR GFNSEAMPID EVDEDVAKVF
801: RKLRVETAID EAVSRVSCIL GSPKAMQQYR RMLKRYQQAK DDHEK

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.