CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020190_P001	Maize	cytosol, mitochondrion	15.83	93.68
Zm00001d049671_P001	Maize	mitochondrion	16.41	92.86
Zm00001d043159_P001	Maize	mitochondrion	16.6	92.43
Zm00001d022185_P003	Maize	nucleus	92.14	90.55
TraesCS2B01G188800.1	Wheat	cytosol	79.9	80.14
HORVU2Hr1G029780.1	Barley	cytosol	79.81	80.04
TraesCS2D01G169900.1	Wheat	cytosol	79.51	79.82
TraesCS2A01G163000.1	Wheat	cytosol	79.32	79.63
Os07t0623100-01	Rice	cytosol	21.65	79.36
Zm00001d002681_P001	Maize	cytosol	25.34	78.14
EER94762	Sorghum	nucleus	68.83	69.24
OQU91909	Sorghum	cytosol	51.65	52.05
OQU93088	Sorghum	mitochondrion	50.0	51.81
EES01985	Sorghum	nucleus	26.6	32.43
OQU81398	Sorghum	nucleus	30.19	31.26
KXG36244	Sorghum	nucleus	25.44	28.67

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	UniProt:A0A1B6QFQ9	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683
InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	EnsemblPlants:KXG36730
ProteinID:KXG36730	ProteinID:KXG36730.1	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859
PFAM:PF12796	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335
PANTHER:PTHR23335:SF14	SMART:SM00015	SMART:SM00248	SMART:SM01076	EnsemblPlantsGene:SORBI_3002G380200	SUPFAM:SSF48403
SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI00081AD4D4	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:73626698..73633534

Molecular Weight (calculated)

114873.0 Da

IEP (calculated)

5.591

GRAVY (calculated)

-0.535

Length

1030 amino acids

Sequence
(BLAST)

0001: MAEIRKYAMS NQPPDIPQIL LEAQNRWLRP TEICQILSNY KKFSIAPEPP NRPQSGSLFL FDRKILRYFR KDGHNWRKKK DGKTVKEAHE KLKVGSVDVL
0101: HCYYAHGEEN ENFQRRTYWL LEESFMNIVL VHYLEIKGVK QSFNRAKEAE ENAGLSHADS PACSNSFASQ SQVASQSMDA ESPISGQISE YEDAETDNSR
0201: ASSRYHPFTE MQQPVDGIMM GNLFGASAPS VSVNNLAAGY LGEMQPTGAN LTNHFSTRND VASVFNETGS ELGGGPKASI DSVLLGEPFQ EYPGGFMDST
0301: LYSSVATLGN SLDDGLQTFM SEALYTNNLT QKEVDALSAA GITSSKAEND GYTDQSVRYP LLKQSSSDLF KMEPDGLKKF DSFSRWMNNE LPEVADLDIK
0401: SSSDAFWSTT ETVNVADGSS IPINEQLDAF VVSPSLSEEQ LFSIIDVSPS WAYNGKKTKV LITGTFLAKK EDVENRRWSC MFGDAEVSAE VLVDGSLRCY
0501: TPVHRSGRVP FYVTCSNRVA CSEVREFEFR DSETHYMDTS DQHTTGINEM HLHIRLDKLL SLEQEDYEMY VLSNGNKSEL IDTINSLMLD DNLSNLALPF
0601: DEKELSTVRD QNLEKQVKEK LYYWLIHKIH DDGKGPNVLG KEGQGAIHLV AALGYDWAIK PIVAAGVNIN FRDIRGWTAL HWAASCGRER TVGALIANGA
0701: ASGPLTDPTQ QYPSGRTPAD LASENGHKGI AGFLAESALT SHLSALTLKE SQGGNVEEIC GVTAPAAEDF AEPSSSQLAC VNSQEESLKD SLGAVRKSTQ
0801: AAARIFQAFR VESFHRKKVI EYGDDDCGLS DERTLSLISL RNPKPGHGDL HSAAVRIQNK FRGWKGRKEF MIIRQKIVKI QAHVRGHQVR KNYRKVVWSV
0901: GIVEKVILRW RRKRRGLRGF QPEKQLEGPS WQIQPAKAEA EDEYDFLKDG RKQAEGRLQR ALARVHSMNQ YPEARDQYRR LQACVNSLQE SQAMQDRMLA
1001: DSAGTDGGDF MAELEELCRD DGDAPMSTIS

Best Arabidopsis Sequence Match ( AT5G64220.2 )
(BLAST)

0001: MADRGSFGFA PRLDIKQLLS EAQHRWLRPA EICEILRNHQ KFHIASEPPN RPPSGSLFLF DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH
0101: CYYAHGEDNE NFQRRCYWML EQDLMHIVFV HYLEVKGNRM STSGTKENHS NSLSGTGSVN VDSTATRSSI LSPLCEDADS GDSRQASSSL QQNPEPQTVV
0201: PQIMHHQNAS TINSYNTTSV LGNRDGWTSA HGNRVKGSNS QRSGDVPAWD ASFENSLARY QNLPYNAPLT QTQPSTFGLI PMEGKTEKGS LLTSEHLRNP
0301: LQSQVNWQTP VQESVPLQKW PMDSHSGMTD ATDLALFGQG AHENFGTFSS LLGSQDQQSS SFQAPFTNNE AAYIPKLGPE DLIYEASANQ TLPLRKALLK
0401: KEDSLKKVDS FSRWVSKELG EMEDLQMQSS SGGIAWTSVE CENAAAGSSL SPSLSEDQRF TMIDFWPKWT QTDSEVEVMV IGTFLLSPQE VTSYSWSCMF
0501: GEVEVPADIL VDGVLCCHAP PHEVGRVPFY ITCSDRFSCS EVREFDFLPG STRKLNATDI YGANTIETSL HLRFENLLAL RCSVQEHHIF ENVGEKRRKI
0601: SKIMLLKDEK EPPLPGTIEK DLTELEAKER LIREEFEDKL YLWLIHKVTE EGKGPNILDE DGQGVLHLAA ALGYDWAIKP ILAAGVSINF RDANGWSALH
0701: WAAFSGREDT VAVLVSLGAD AGALADPSPE HPLGKTAADL AYGNGHRGIS GFLAESSLTS YLEKLTVDAK ENSSADSSGA KAVLTVAERT ATPMSYGDVP
0801: ETLSMKDSLT AVLNATQAAD RLHQVFRMQS FQRKQLSELG GDNKFDISDE LAVSFAAAKT KKSGHSSGAV HAAAVQIQKK YRGWKKRKEF LLIRQRIVKI
0901: QAHVRGHQVR KQYRAIIWSV GLLEKIILRW RRKGSGLRGF KRDTISKPTE PVCPAPQEDD YDFLKEGRKQ TEERLQKALT RVKSMAQYPE ARAQYRRLLT
1001: VVEGFRENEA SSSSALKNNT EEAANYNEED DLIDIDSLLD DDTFMSLAFE

Arabidopsis Description

CAMTA2Calmodulin-binding transcription activator 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPP4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.