Factsheet for Bra004217.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034007.1-P	Field mustard	nucleus	77.13	75.99
CDX96099	Canola	nucleus	95.49	75.68
Bra004096.1-P	Field mustard	nucleus	73.32	75.13
AT1G67310.1	Thale cress	cytosol	71.11	69.78
VIT_14s0036g00610.t01	Wine grape	plastid	8.53	57.43
PGSC0003DMT400084738	Potato	cytosol	36.91	53.8
Solyc05g015650.2.1	Tomato	nucleus	48.14	51.34
VIT_01s0010g03850.t01	Wine grape	nucleus	49.75	51.24
KRH58784	Soybean	nucleus	50.45	51.17
KRH42689	Soybean	cytosol	48.75	50.36
GSMUA_AchrUn_...	Banana	cytosol	5.02	49.02
Solyc12g035520.1.1	Tomato	nucleus	46.94	48.1
GSMUA_Achr8P00680_001	Banana	mitochondrion	6.32	45.32
EES01985	Sorghum	nucleus	33.9	40.0
Zm00001d003958_P013	Maize	nucleus	39.02	39.73
OQU81398	Sorghum	nucleus	39.52	39.6
Os04t0388500-01	Rice	nucleus	39.82	39.58
TraesCS2B01G300800.2	Wheat	nucleus	40.32	39.11
Zm00001d025235_P004	Maize	nucleus	39.32	39.08
TraesCS2A01G283800.1	Wheat	nucleus	40.12	38.95
TraesCS2D01G282800.6	Wheat	nucleus	39.72	38.45
HORVU2Hr1G069950.6	Barley	nucleus	39.22	38.18
TraesCS3D01G426700.5	Wheat	nucleus	30.89	37.65
TraesCS3A01G433300.2	Wheat	nucleus	30.59	37.15
TraesCS3B01G469100.2	Wheat	cytosol	29.99	37.14
Os01t0923600-02	Rice	nucleus	32.7	37.13
Zm00001d042313_P004	Maize	nucleus	32.8	36.66
Zm00001d009281_P001	Maize	cytosol	7.22	36.36
HORVU3Hr1G094860.7	Barley	cytosol, nucleus, plastid	30.09	35.5
Bra038534.1-P	Field mustard	nucleus	29.39	31.51
Bra030248.1-P	Field mustard	nucleus	29.69	28.71
Bra009382.1-P	Field mustard	nucleus	28.08	27.81
Bra038040.1-P	Field mustard	nucleus	25.18	27.31
Bra022188.1-P	Field mustard	cytosol	23.27	27.29
Bra037769.1-P	Field mustard	cytosol	27.68	26.85
Bra004218.1-P	Field mustard	nucleus	0.3	1.02

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra004217	EnsemblPlants:Bra004217.1	EnsemblPlants:Bra004217.1-P	InterPro:CG-1_dom	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783
InterPro:IPR020683	InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set
UniProt:M4CJ33	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859	PFAM:PF12796
PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF1
SMART:SM00015	SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296
UniParc:UPI00025415E7	SEG:seg	:	:	:	:

Description

AT1G67310 (E=2e-255) | calmodulin binding / transcription regulator

Coordinates

chrA07:-:17478335..17483180

Molecular Weight (calculated)

110567.0 Da

IEP (calculated)

6.846

GRAVY (calculated)

-0.485

Length

997 amino acids

Sequence
(BLAST)

001: MQSEYDVSTL YREAHTRWLK PPEVHFILLN HERYRLTDKP PHKPSSGSVL LYNKRVLKFF RKDGHQWKRK KDGRAIAEAH ERLKASYILV GNVEALQCYY
101: AHGEHEPSFQ RRIYWILDPE YEHIALVHYR DVSDGKEVKQ QTGGTVLHFS PNPSTLGSIG TQNASYSHCI GVSSEIHQQQ HSSASAGNVE VNSDVFCNSN
201: GTETSKGSGS LSYEFETREA LKRLEEQLSL GDDDNVVQNE SLDGLQFLGF SKTDIDHHLV PPATVHQRPE SSSKLGRCYG GYVGGAQCNV STVGSPLHSL
301: NSLLSLECTE DINAQPAAGH QRAENNRLER CYGGYIGAEY HSNNLMLVKN DSGGSGGSGD QKAESWKDVL EACEASIALN SEGSTPSSAK GLLTRMQEDS
401: NLSYSNQADQ ATLLLPQELG PSFELPTRYS ELGALANNAN NSRMELPFEQ VMNQTVAHKQ KFTIQDISPE WGYANETTKV MIIGSFLCDP KESTWSCMFG
501: STEVPFEIIK EGVIRCQAPP CGPGKVNLCI ASGDGLSCSQ IKEFEYRDKP DDTSCPWSSR DELLLLVRLV QTLVSDSKSN LEPWSHILET VLDGTATSSS
601: TVDWLLQELV KEKLDAWLSS RPRQVEDQTS CCSLSKQEQG IIHMVAGLGF EWALHPILSR GVSVDFRDIN GWSALHWAAR FGSEKMVAAL IASGASAGAV
701: TDPTAQDPAG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETEKSK ETAQLQAEVT LNSISERSPH SLKDSLAAVR NAAQAVARIQ AAFRAHSFRK
801: RQQREAAMAA YFQEYGIYAD IKGISAISKV APGNVKNYHS AALSIQKNYR RYKRRKEFLS LRKKVVKIQA HVRGYQIRKH YKVICWAVGI LDKVVLRWRR
901: KGAGLRGFRQ DVEDSEEEDI LKVFRKQKVD VAVKEAFSRV LSMAKSPEAR QQYHRVLKRY CQTKAELGKT ETLGAGGDED EDLFDLADME DDSLFAL

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.