Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G282800.6 | Wheat | nucleus | 98.35 | 98.16 |
| TraesCS2A01G283800.1 | Wheat | nucleus | 97.37 | 97.47 |
| HORVU2Hr1G069950.6 | Barley | nucleus | 92.9 | 93.26 |
| Os04t0388500-01 | Rice | nucleus | 73.93 | 75.77 |
| OQU81398 | Sorghum | nucleus | 71.01 | 73.37 |
| Zm00001d003958_P013 | Maize | nucleus | 69.46 | 72.93 |
| Zm00001d025235_P004 | Maize | nucleus | 68.09 | 69.79 |
| Zm00001d009281_P001 | Maize | cytosol | 13.13 | 68.18 |
| GSMUA_Achr9P01330_001 | Banana | nucleus | 55.06 | 53.4 |
| VIT_14s0036g00610.t01 | Wine grape | plastid | 7.59 | 52.7 |
| KRH15615 | Soybean | cytosol | 15.56 | 50.47 |
| PGSC0003DMT400084738 | Potato | cytosol | 31.71 | 47.66 |
| Solyc05g015650.2.1 | Tomato | nucleus | 42.02 | 46.2 |
| VIT_01s0010g03850.t01 | Wine grape | nucleus | 43.48 | 46.18 |
| KRH31521 | Soybean | nucleus | 39.88 | 45.05 |
| KRH58784 | Soybean | nucleus | 43.0 | 44.96 |
| KRH42689 | Soybean | cytosol | 41.05 | 43.73 |
| KRG97392 | Soybean | nucleus | 40.76 | 43.56 |
| TraesCS2B01G254100.1 | Wheat | cytosol | 5.84 | 43.48 |
| Solyc12g035520.1.1 | Tomato | nucleus | 41.15 | 43.47 |
| CDY07431 | Canola | nucleus | 39.01 | 41.55 |
| Bra004096.1-P | Field mustard | nucleus | 38.72 | 40.9 |
| Bra034007.1-P | Field mustard | nucleus | 40.18 | 40.81 |
| CDY28897 | Canola | nucleus | 38.72 | 40.78 |
| CDY51184 | Canola | nucleus | 40.27 | 40.39 |
| Bra004217.1-P | Field mustard | nucleus | 39.11 | 40.32 |
| CDY12637 | Canola | nucleus | 40.27 | 40.04 |
| TraesCS3B01G469100.2 | Wheat | cytosol | 31.23 | 39.88 |
| AT1G67310.1 | Thale cress | cytosol | 39.01 | 39.47 |
| CDY01799 | Canola | nucleus | 38.62 | 38.73 |
| TraesCS5B01G521100.2 | Wheat | cytosol | 27.72 | 31.99 |
| CDX96099 | Canola | nucleus | 39.01 | 31.88 |
| TraesCS2B01G188800.1 | Wheat | cytosol | 30.16 | 30.18 |
| TraesCS4B01G306300.4 | Wheat | cytosol | 29.77 | 28.68 |
| TraesCS2B01G254000.2 | Wheat | cytosol | 19.36 | 26.68 |
| Bra004218.1-P | Field mustard | nucleus | 0.19 | 0.68 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:CG-1_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR000048 |
| InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IPT_dom |
| InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF01833 |
| PFAM:PF03859 | PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 |
| PANTHER:PTHR23335 | PANTHER:PTHR23335:SF1 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 |
| SUPFAM:SSF52540 | SUPFAM:SSF81296 | EnsemblPlantsGene:TraesCS2B01G300800 | EnsemblPlants:TraesCS2B01G300800.2 | TIGR:cd00102 | TIGR:cd00204 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:423658566..423666251
Molecular Weight (calculated)
114509.0 Da
IEP (calculated)
5.136
GRAVY (calculated)
-0.495
Length
1028 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIDCFNSCIT KGFDINVLLR EAKSRWLKPS EVYYILLNHE QLQITHEPPN KPPSGALFLY NRRVNRFFRK DGYAWRRKKD GRTVGEAHER LKVGNIDALS
0101: CYYAHGEQNP YFQRRCFWML EPAYDHIVLV QYREVAEGRY YSTLSNGSAG SLSTLSYPND IHGKHGSTSD FSEGNESHQS SVTEVSSYSA NKEENHDSGV
0201: LLSIPELQQS TVMGIPELDQ SSLERSSEFC MVNNNDSTNT SGLNQALKSI AEQLSLGDDD YIYINQARSL DFTTNTEAAD VQGNQTSNSL GDDEANQIRP
0301: EGAHGVGRGI SSSWENVLQS DLGLPASSTY QFGAHYQQSS EYQPPGGLDS SNLQLQISAA KRFLLGSEDP IDSPSYIPRD EGINGINTLS AHDSSLESCL
0401: NPDWHRTTPV TLQSSLYQSN SCGYEISEFF DNGQFEPSSE EDTRLTVKQK QQFSIREISP EWAFCYEVTK VIITGDFLCD PSNICWAVMF GDTEVPVEIV
0501: QPGVLRCHTP LHSAGKLTLC ITTGNRKVCS EIKDFEFRAK STASSFIDFA PSSMKSTEEL SLLAKFARIL LCDNGSSAAS GDDPQPGQSP KLKMNEDNWQ
0601: RLINELDVGC ENPLSRVDWI MEELLKSKLQ QWLSLRLQGD DGTCSLSKNE QGIIHLISAL GYDWALSSVL SAGVGINLRD SNGWTALHWA AYYGREKMVA
0701: ALLAAGASAP AVTDPTAQDP VGKSAAFLAS EQGHVGLAGY LSEVALTSYL ASLTIEESGI SDGLAAIEAE RAVESISQRS AQLHGGTEDE LSLKDSLAAV
0801: RNAAQAAARI QNAFRAFSFR RRQHKDARLK DEYGMTQEDI DELAAASRLY YQHHVSNGQF CDKAAVSIQK KYRGWKGRKN FLHMRRNVVK IQAHVRGHQV
0901: RKKYKTFVST VSVLEKVILR WRRKGHGLRG FRAEQSVMIE AEEGEEEDDD DFDDDEAVKI FRRQKVDESV KESVSRVLSM VDSPEARMQY RRMLEEFRQA
1001: TAELGASDKA TSSILDNDLL VEIDKFTC
0101: CYYAHGEQNP YFQRRCFWML EPAYDHIVLV QYREVAEGRY YSTLSNGSAG SLSTLSYPND IHGKHGSTSD FSEGNESHQS SVTEVSSYSA NKEENHDSGV
0201: LLSIPELQQS TVMGIPELDQ SSLERSSEFC MVNNNDSTNT SGLNQALKSI AEQLSLGDDD YIYINQARSL DFTTNTEAAD VQGNQTSNSL GDDEANQIRP
0301: EGAHGVGRGI SSSWENVLQS DLGLPASSTY QFGAHYQQSS EYQPPGGLDS SNLQLQISAA KRFLLGSEDP IDSPSYIPRD EGINGINTLS AHDSSLESCL
0401: NPDWHRTTPV TLQSSLYQSN SCGYEISEFF DNGQFEPSSE EDTRLTVKQK QQFSIREISP EWAFCYEVTK VIITGDFLCD PSNICWAVMF GDTEVPVEIV
0501: QPGVLRCHTP LHSAGKLTLC ITTGNRKVCS EIKDFEFRAK STASSFIDFA PSSMKSTEEL SLLAKFARIL LCDNGSSAAS GDDPQPGQSP KLKMNEDNWQ
0601: RLINELDVGC ENPLSRVDWI MEELLKSKLQ QWLSLRLQGD DGTCSLSKNE QGIIHLISAL GYDWALSSVL SAGVGINLRD SNGWTALHWA AYYGREKMVA
0701: ALLAAGASAP AVTDPTAQDP VGKSAAFLAS EQGHVGLAGY LSEVALTSYL ASLTIEESGI SDGLAAIEAE RAVESISQRS AQLHGGTEDE LSLKDSLAAV
0801: RNAAQAAARI QNAFRAFSFR RRQHKDARLK DEYGMTQEDI DELAAASRLY YQHHVSNGQF CDKAAVSIQK KYRGWKGRKN FLHMRRNVVK IQAHVRGHQV
0901: RKKYKTFVST VSVLEKVILR WRRKGHGLRG FRAEQSVMIE AEEGEEEDDD DFDDDEAVKI FRRQKVDESV KESVSRVLSM VDSPEARMQY RRMLEEFRQA
1001: TAELGASDKA TSSILDNDLL VEIDKFTC
0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
Arabidopsis Description
CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.