Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G237300.2 | Wheat | cytosol | 97.45 | 80.15 |
| TraesCS2A01G229400.1 | Wheat | nucleus | 97.45 | 80.15 |
| HORVU2Hr1G051690.3 | Barley | cytosol | 94.1 | 76.47 |
| Os07t0490200-01 | Rice | nucleus | 74.66 | 60.09 |
| KXG36244 | Sorghum | nucleus | 71.18 | 58.1 |
| GSMUA_Achr5P21190_001 | Banana | cytosol | 40.21 | 56.39 |
| Zm00001d021516_P003 | Maize | cytosol, nucleus, plasma membrane | 70.91 | 54.65 |
| CDY45590 | Canola | cytosol | 19.57 | 47.56 |
| Solyc01g060140.2.1 | Tomato | nucleus | 40.62 | 45.43 |
| PGSC0003DMT400011979 | Potato | cytosol | 41.69 | 44.3 |
| GSMUA_Achr8P10490_001 | Banana | cytosol | 47.32 | 42.12 |
| VIT_05s0077g01240.t01 | Wine grape | cytosol | 44.64 | 35.92 |
| Solyc12g099340.1.1 | Tomato | nucleus | 42.9 | 34.97 |
| KRH37009 | Soybean | nucleus | 42.36 | 34.69 |
| AT3G16940.1 | Thale cress | nucleus | 39.28 | 34.67 |
| KRH50762 | Soybean | nucleus | 42.63 | 34.53 |
| KRH02327 | Soybean | nucleus | 42.63 | 34.49 |
| KRH11981 | Soybean | nucleus | 42.09 | 34.47 |
| Bra022188.1-P | Field mustard | cytosol | 39.14 | 34.35 |
| CDX92108 | Canola | cytosol | 39.28 | 34.35 |
| CDX95894 | Canola | cytosol | 38.87 | 34.0 |
| CDY22778 | Canola | nucleus | 41.15 | 33.41 |
| CDY58036 | Canola | nucleus | 41.02 | 33.3 |
| Bra038040.1-P | Field mustard | nucleus | 41.02 | 33.3 |
| TraesCS5B01G521100.2 | Wheat | cytosol | 24.93 | 20.88 |
| TraesCS3B01G469100.2 | Wheat | cytosol | 22.39 | 20.75 |
| TraesCS2B01G300800.2 | Wheat | nucleus | 26.68 | 19.36 |
| TraesCS2B01G188800.1 | Wheat | cytosol | 26.54 | 19.28 |
| TraesCS4B01G306300.4 | Wheat | cytosol | 26.14 | 18.28 |
| CDY69566 | Canola | nucleus | 2.82 | 7.69 |
| GSMUA_Achr5P21200_001 | Banana | cytosol | 0.67 | 3.4 |
| TraesCS2B01G254100.1 | Wheat | cytosol | 0.27 | 1.45 |
| Solyc01g060170.2.1 | Tomato | nucleus | 0.27 | 1.26 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 | InterPro:IPR002110 |
| InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set |
| InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 |
| PANTHER:PTHR23335 | PANTHER:PTHR23335:SF3 | SMART:SM00015 | SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF52540 |
| SUPFAM:SSF81296 | EnsemblPlantsGene:TraesCS2B01G254000 | EnsemblPlants:TraesCS2B01G254000.2 | TIGR:cd00204 | SEG:seg | : |
Description
No Description!
Coordinates
chr2B:-:281872519..281878760
Molecular Weight (calculated)
83291.8 Da
IEP (calculated)
8.841
GRAVY (calculated)
-0.455
Length
746 amino acids
Sequence
(BLAST)
(BLAST)
001: RLDQENAIAH PSTEAEAEAP TMNVIQYYTS PPISANSASV HTEISFSPPA PEEINSHGGS AISSDTGGSS LEEFWVHLLE SSMKKDTACG ASVAFSQQIK
101: CGMKDSGNDT DSTNNVHANH AGALEHQLDQ SQYPLTSDLD SQSQQFATSL RRTPVDGDIP NDVPARENSL GLWKYLDDDS PCLGDNIVST EKIFNITDFS
201: PEWACSTEHT KILVIGHYYE QYKHLAGSNI YGIFGDNCVA ANMVQTGVYR FMVGPHTAGR VDFYLTLDGK TPISEVLNFE YRSVPGSSLH SELKPLEDEY
301: TKSKLQMQMR LARLLFVTNK KKIAPKLLVE GSKVSNLILA SPEKEWMDLW KIAGDSEGKS VHATEDLLEL VLRNRLQEWL LERVIGGHKS TGRDDLGQGP
401: IHLCSFLGYT WAIRLFSVSG FSLDFRDSSG WTALHWAAYY GREKMVAALL SAGANPSLVT DPTAVSPGGC TPADLAARQG YVGLAAYLAE KGLTAHFESM
501: SLSKGTKQSP SRTKLTKVHS EKFENLTEQE LCLKESLAAY RNAADAASNI QAALRDRTLK LQTKAILLAN PEMQATAIVA AMRIQHAFRN YNRKKEMRAA
601: ARIQNHFRTW KVRRNFTNMR RQAIRIQAAY RGHQVRRQYR KVIWSVGVVE KAILRWRKKR KGLRGIANGM PVEMTVDIEA ASTAEEGFFQ ASRQQAEDRF
701: NRSVVRVQAL FRCHRAQHEY RRMRIAHEEA KLEFSKGQQQ APACRR
101: CGMKDSGNDT DSTNNVHANH AGALEHQLDQ SQYPLTSDLD SQSQQFATSL RRTPVDGDIP NDVPARENSL GLWKYLDDDS PCLGDNIVST EKIFNITDFS
201: PEWACSTEHT KILVIGHYYE QYKHLAGSNI YGIFGDNCVA ANMVQTGVYR FMVGPHTAGR VDFYLTLDGK TPISEVLNFE YRSVPGSSLH SELKPLEDEY
301: TKSKLQMQMR LARLLFVTNK KKIAPKLLVE GSKVSNLILA SPEKEWMDLW KIAGDSEGKS VHATEDLLEL VLRNRLQEWL LERVIGGHKS TGRDDLGQGP
401: IHLCSFLGYT WAIRLFSVSG FSLDFRDSSG WTALHWAAYY GREKMVAALL SAGANPSLVT DPTAVSPGGC TPADLAARQG YVGLAAYLAE KGLTAHFESM
501: SLSKGTKQSP SRTKLTKVHS EKFENLTEQE LCLKESLAAY RNAADAASNI QAALRDRTLK LQTKAILLAN PEMQATAIVA AMRIQHAFRN YNRKKEMRAA
601: ARIQNHFRTW KVRRNFTNMR RQAIRIQAAY RGHQVRRQYR KVIWSVGVVE KAILRWRKKR KGLRGIANGM PVEMTVDIEA ASTAEEGFFQ ASRQQAEDRF
701: NRSVVRVQAL FRCHRAQHEY RRMRIAHEEA KLEFSKGQQQ APACRR
0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
Arabidopsis Description
CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.