Factsheet for Zm00001d021516_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

mitochondrion 2
nucleus 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36244	Sorghum	nucleus	81.2	86.0
TraesCS2B01G254000.2	Wheat	cytosol	54.65	70.91
Os07t0490200-01	Rice	nucleus	66.94	69.9
TraesCS2A01G229400.1	Wheat	nucleus	64.77	69.13
TraesCS2D01G237300.2	Wheat	cytosol	64.67	69.02
HORVU2Hr1G051690.3	Barley	cytosol	64.46	67.97
TraesCS2B01G254100.1	Wheat	cytosol	8.78	61.59
GSMUA_Achr5P21190_001	Banana	cytosol	31.2	56.77
GSMUA_Achr8P10490_001	Banana	cytosol	44.73	51.67
Solyc01g060170.2.1	Tomato	nucleus	8.47	51.57
GSMUA_Achr5P21200_001	Banana	cytosol	7.64	50.34
CDY45590	Canola	cytosol	14.88	46.91
Solyc01g060140.2.1	Tomato	nucleus	31.09	45.13
AT3G16940.1	Thale cress	nucleus	39.36	45.09
CDX92108	Canola	cytosol	38.95	44.2
PGSC0003DMT400011979	Potato	cytosol	32.02	44.16
KRH11981	Soybean	nucleus	41.53	44.13
KRH37009	Soybean	nucleus	41.53	44.13
Bra022188.1-P	Field mustard	cytosol	38.74	44.12
CDX95894	Canola	cytosol	38.43	43.61
KRH50762	Soybean	nucleus	41.43	43.54
VIT_05s0077g01240.t01	Wine grape	cytosol	41.53	43.37
KRH02327	Soybean	nucleus	41.12	43.17
Solyc12g099340.1.1	Tomato	nucleus	40.19	42.51
CDY22778	Canola	nucleus	39.57	41.68
CDY58036	Canola	nucleus	39.46	41.57
Bra038040.1-P	Field mustard	nucleus	39.46	41.57
CDY69566	Canola	nucleus	10.33	36.63
Zm00001d011907_P001	Maize	mitochondrion	3.93	32.48
Zm00001d050702_P001	Maize	cytosol	5.58	30.51
Zm00001d043159_P001	Maize	mitochondrion	5.79	30.27
Zm00001d009281_P001	Maize	cytosol	6.1	29.8
Zm00001d020190_P001	Maize	cytosol, mitochondrion	5.27	29.31
Zm00001d002681_P001	Maize	cytosol	10.02	29.04
Zm00001d049671_P001	Maize	mitochondrion	5.27	28.02
Zm00001d039938_P001	Maize	cytosol	7.64	26.71
Zm00001d003958_P013	Maize	nucleus	26.76	26.46
Zm00001d025235_P004	Maize	nucleus	27.07	26.12
Zm00001d028488_P001	Maize	cytosol	7.13	25.27
Zm00001d028007_P004	Maize	nucleus	25.1	23.71
Zm00001d022185_P003	Maize	nucleus	25.62	23.66
Zm00001d014286_P002	Maize	nucleus	25.1	23.43
Zm00001d042313_P004	Maize	nucleus	21.59	23.43
Zm00001d023435_P001	Maize	cytosol	8.06	23.28
Zm00001d030518_P005	Maize	cytosol	24.79	21.96
Zm00001d047209_P003	Maize	nucleus	24.9	21.95
Zm00001d031632_P034	Maize	plasma membrane	9.09	17.64
Zm00001d016518_P008	Maize	plasma membrane	9.09	17.64
Zm00001d049403_P001	Maize	cytosol	10.33	15.06
Zm00001d048031_P003	Maize	golgi	12.71	13.84

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	EntrezGene:100502366	MapMan:15.5.26	Gene3D:2.60.40.10	UniProt:A0A1D6IBR1
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0043565	GO:GO:0045893	GO:GO:0070417	InterPro:IPR000048	InterPro:IPR002110
InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold
InterPro:Ig_E-set	ProteinID:ONM57373.1	PFAM:PF03859	PFAM:PF12796	PFscan:PS50088	PFscan:PS50096
PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF3	SMART:SM00015	SMART:SM00248
SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF81296	TMHMM:TMhelix	UniParc:UPI0008451D5C	EnsemblPlantsGene:Zm00001d021516
EnsemblPlants:Zm00001d021516_P003	EnsemblPlants:Zm00001d021516_T003	SEG:seg	:	:	:

Description

CAMTA-transcription factor 2Calmodulin-binding transcription activator 5

Coordinates

chr7:-:154821346..154840252

Molecular Weight (calculated)

107842.0 Da

IEP (calculated)

8.075

GRAVY (calculated)

-0.404

Length

968 amino acids

Sequence
(BLAST)

001: MAGGAGGRDP LVASEIHGFL TCAGRPAPPP HEGGLFSLRF LFFSFGGTVV LYDRKVVRNF RKDGHNWKKK KDGKTVQEAH EKLKIGNEEK VHVYYARGED
101: DPNFFRRCYW LLDKELERIV LVHYRQTSEE SALPPSHVEA EVAEVPRINM IHYTSSTDSA SAHTELSSSA AAAPEDINSN GGGAVSSGER CLDPSISLFD
201: YMYTSMPFST SPKYTSVSSF GEFAETDNQG SSLESFWVDL LESSMKNDTP VDASACGGSL VSNQQTNNGM GDSGNNILYI NATSNAIFSP PTNVVSEAYA
301: NPGLSQVSES YFGSLKDQAN HAPSLLTSDL DSQSKQHTNS LMKTPVSDNM PNDVPARQNS LGLWKYLDDD ISLDDNPSSG ILPTEQVTGE IPFQITEISS
401: EWAYCTEDTK NYPNNCLLPG LVDVEVLVVG CFHENYRHLA GTNLFCVIGD QCVDANIVQT GVYRFIARPH APGRVNLYLT LDGKTPISEV LSFHYRMVPD
501: SQNLAEDEPQ KSKLQMQMRL ARLLFTTNKK KIAPKLLVEG SKVSNLLSAS TEKEWMDLSK FVTDSKGTYV PATEGLLELV LRNRLQEWLV EKLIEGHKST
601: GRDDLGQGPI HLCSCLGYTW AIHLFSLSGF SLDFRDSSGW TALHWAAYCG REKMVAALLS AGANPSLVTD PTHDVPGGQT AGDLAAGQGY HGLAAYLSEK
701: GLTAHFEAMS LSKGKRSTSR TESLKRNTKE FENLSEQELC LRESLAAYRN AADAASNIQA ALRERTLKLQ TKAIQLANPE NDASAIVAAM RIQHAYRNYN
801: RKKMMRAAAR IQSHFRTWQI RRNFMNMRRQ AIKIQVKLLL LLCVLVCYFF FQGIRFVHAA YRGHQVRRQY RKVLWSVGVV EKAILRWRKK RKGLRGIATG
901: MPVAMATDAE AASTAEEDYY QVGRQQAEDR FNRSVVRVQA LFRSHRAQQE YRRMKVAHEE AKVEFGRK

Best Arabidopsis Sequence Match ( AT2G22300.1 )
(BLAST)

0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS

Arabidopsis Description

CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.