Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038040.1-P | Field mustard | nucleus | 99.46 | 99.46 |
| CDY22778 | Canola | nucleus | 99.35 | 99.35 |
| CDY69566 | Canola | nucleus | 27.53 | 92.67 |
| CDX92108 | Canola | cytosol | 64.42 | 69.4 |
| CDX95894 | Canola | cytosol | 63.98 | 68.93 |
| CDY45590 | Canola | cytosol | 22.09 | 66.12 |
| GSMUA_Achr5P21200_001 | Banana | cytosol | 10.01 | 62.59 |
| CDX96915 | Canola | nucleus | 5.22 | 60.76 |
| TraesCS2B01G254100.1 | Wheat | cytosol | 8.92 | 59.42 |
| KRH11981 | Soybean | nucleus | 56.91 | 57.41 |
| KRH37009 | Soybean | nucleus | 56.69 | 57.19 |
| KRH50762 | Soybean | nucleus | 57.02 | 56.89 |
| KRH02327 | Soybean | nucleus | 56.69 | 56.51 |
| PGSC0003DMT400011979 | Potato | cytosol | 42.55 | 55.7 |
| VIT_05s0077g01240.t01 | Wine grape | cytosol | 56.15 | 55.66 |
| Solyc12g099340.1.1 | Tomato | nucleus | 55.28 | 55.52 |
| Solyc01g060140.2.1 | Tomato | nucleus | 39.17 | 53.97 |
| GSMUA_Achr5P21190_001 | Banana | cytosol | 30.58 | 52.82 |
| GSMUA_Achr8P10490_001 | Banana | cytosol | 43.42 | 47.61 |
| KXG36244 | Sorghum | nucleus | 43.74 | 43.98 |
| TraesCS2A01G229400.1 | Wheat | nucleus | 43.31 | 43.88 |
| TraesCS2D01G237300.2 | Wheat | cytosol | 43.31 | 43.88 |
| CDY61797 | Canola | nucleus | 5.33 | 43.75 |
| HORVU2Hr1G051690.3 | Barley | cytosol | 43.2 | 43.25 |
| Os07t0490200-01 | Rice | nucleus | 42.76 | 42.39 |
| TraesCS2B01G254000.2 | Wheat | cytosol | 33.3 | 41.02 |
| Zm00001d021516_P003 | Maize | cytosol, nucleus, plasma membrane | 41.57 | 39.46 |
| CDX81478 | Canola | nucleus | 5.33 | 31.21 |
| CDX92455 | Canola | cytosol | 19.59 | 28.39 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 27.97 | 27.81 |
| CDX76935 | Canola | nucleus | 28.18 | 27.35 |
| CDX81217 | Canola | nucleus | 28.73 | 26.75 |
| CDY25585 | Canola | nucleus | 28.62 | 26.57 |
| CDX69907 | Canola | nucleus | 29.05 | 26.51 |
| CDX89451 | Canola | nucleus | 29.38 | 26.26 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 28.51 | 26.23 |
| CDY18719 | Canola | cytosol | 28.4 | 25.61 |
| CDY28897 | Canola | nucleus | 26.22 | 24.69 |
| CDY07431 | Canola | nucleus | 25.9 | 24.66 |
| CDY51184 | Canola | nucleus | 27.09 | 24.29 |
| CDY01799 | Canola | nucleus | 26.99 | 24.2 |
| CDY12637 | Canola | nucleus | 26.99 | 23.98 |
| CDX96099 | Canola | nucleus | 27.09 | 19.79 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | GO:A0A078J2Z8 | UniProt:A0A078J2Z8 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDY58036 | ProteinID:CDY58036 | ProteinID:CDY58036.1 |
| InterPro:CG-1_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00023027001 |
| InterPro:IPR000048 | InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 |
| InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | PFAM:PF00612 | PFAM:PF03859 | PFAM:PF12796 |
| PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 | PANTHER:PTHR23335 | PANTHER:PTHR23335:SF3 |
| SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 | SUPFAM:SSF81296 | UniParc:UPI0004EDF90E |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g47670DBnaC08g47670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2Z8]
Coordinates
chrLK033628:+:38056..42692
Molecular Weight (calculated)
104534.0 Da
IEP (calculated)
7.615
GRAVY (calculated)
-0.539
Length
919 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVDSGRLI GSEIHGFHTL QDLDIRTMLE EAYTRWLRPN EIHALLSNHN YFTINVKPVH LPKSGTIVFF DRKMLRNFRK DGHNWKKKKD GKTIKEAHEH
101: LKVGNEERIH VYYAHGDDNP TFVRRCYWLL DKSQEHIVLV HYRETHEVQA APATPGNSYS SSTTDHVSAK PVTEDINSGV RNACNTARSN SLVARNHEIS
201: LHEINTLDWD ELLVETGMTN QSSPTQDDVL YFTEQLQTAP MGSAQQGNHQ AVYNGSTDIP SYLGLGDPVY QNNSPCGARE FSSQHLHCVV DPNQQTRDSS
301: ATVADEQGDA LLNNGYGSQE SFGKWVNNFI SDSPGSVDDP SLEAVYTPGQ ESSAPPAVVH SQSNIPEQVF NITDVSPAWA YSTEKTKILV TGFFHDSFQH
401: FGRSNLFCIC GELRVPAEFL QMGVYRCFLP PQSPGIVNLY LSADGTKPIS QLFSFEHRSV PVIEKVVPQE DQLYKWEEFE FQVRLSHLLF TSSSKISVFS
501: SRISADNLLE AKKLASRTSH LLNSWAYLMK SIQANELPFD QARDHLFELT LKNRLKEWLL EKVIENRNTK EYDSKGLGVI HLCAVLGYTW SILLFSWANI
601: SLDFRDKHGW TALHWAAYYG REKMVAALLS AGARPNLVTD PTKEYLGGCT AADIAQQKGY EGLAAFLAEK CLVAQFRDMK MAGNISGNLE GVKAETSTNP
701: GHSNEEEQSL KDTLAAYRTA AEAAARIQGA FREHELKVRS KAVRFASKEE EAKNIIAAMK IQHAFRNYET RRKIAAAARI QYRFQTWKMR REFLNMRKKA
801: IKIQAVFRGF QVRRQYQKIT WSVGVLEKAI LRWRLKRRGF RGLQVSQPEE KEGTEAVEDF YKTSQKQAED RLERSVVRVQ AMFRSKKAQQ DYRRMKLAHE
901: EAQLEYDGMQ ELDQMDMES
101: LKVGNEERIH VYYAHGDDNP TFVRRCYWLL DKSQEHIVLV HYRETHEVQA APATPGNSYS SSTTDHVSAK PVTEDINSGV RNACNTARSN SLVARNHEIS
201: LHEINTLDWD ELLVETGMTN QSSPTQDDVL YFTEQLQTAP MGSAQQGNHQ AVYNGSTDIP SYLGLGDPVY QNNSPCGARE FSSQHLHCVV DPNQQTRDSS
301: ATVADEQGDA LLNNGYGSQE SFGKWVNNFI SDSPGSVDDP SLEAVYTPGQ ESSAPPAVVH SQSNIPEQVF NITDVSPAWA YSTEKTKILV TGFFHDSFQH
401: FGRSNLFCIC GELRVPAEFL QMGVYRCFLP PQSPGIVNLY LSADGTKPIS QLFSFEHRSV PVIEKVVPQE DQLYKWEEFE FQVRLSHLLF TSSSKISVFS
501: SRISADNLLE AKKLASRTSH LLNSWAYLMK SIQANELPFD QARDHLFELT LKNRLKEWLL EKVIENRNTK EYDSKGLGVI HLCAVLGYTW SILLFSWANI
601: SLDFRDKHGW TALHWAAYYG REKMVAALLS AGARPNLVTD PTKEYLGGCT AADIAQQKGY EGLAAFLAEK CLVAQFRDMK MAGNISGNLE GVKAETSTNP
701: GHSNEEEQSL KDTLAAYRTA AEAAARIQGA FREHELKVRS KAVRFASKEE EAKNIIAAMK IQHAFRNYET RRKIAAAARI QYRFQTWKMR REFLNMRKKA
801: IKIQAVFRGF QVRRQYQKIT WSVGVLEKAI LRWRLKRRGF RGLQVSQPEE KEGTEAVEDF YKTSQKQAED RLERSVVRVQ AMFRSKKAQQ DYRRMKLAHE
901: EAQLEYDGMQ ELDQMDMES
001: MDGDGLGRLI GSEIHGFHTL QDLDVQTMLE EAKSRWLRPN EIHAILYNPK YFTINVKPVN LPNSGRIILF DRKMLRNFRK DGHNWKKKKD GRTVKEAHEH
101: LKVGNEERIH VYYAHGEDNT TFVRRCYWLL DKARENIVLV HYRDTQEAAT TSGDSISSPI SVSEQTFPNR VAAEDIDTVV RNHDISLHDI NTLDWDELLV
201: PTDLNNQSAP TVDNLSYFTE PLQNAANGTA EHGNATVADG SLDALLNDGP QSRESFGRWM NSFISESNGS LEDPSFEPMV MPRQDPLAPQ AVFHSHSNIP
301: EQVFNITDVS PAWAYSSEKT KILVTGFLHD SYQHLERSNL YCVCGDFCVP AEYLQAGVYR CIIPPHSPGM VNLYLSADGH KPISQCFRFE HRAVPVLDKT
401: VPEDNQDSKW EEFEFQVRLS HLLFTSSNKL NVLSSKISPH NLRDAKKLAS KTNHLLNSWA YLVKSIQGNK VSFDQAKDHL FELSLKNRLK EWLMEKVLEG
501: RNTLDYDSKG LGVIHLCASL GYTWSVQLFS LSGLSLNFRD KQGWTALHWA AYYGREKMVA ALLSAGARPN LVTDSTKDNL GGCMAADLAQ QNGYDGLAAY
601: LAEKCLVAQF RDMKIAGNIT GDLEACKAEM LNQGTLPEDE QSLKDALAAY RTAAEAAARI QGAFREKALK AARSSVIQFA NKEEEAKSII AAMKIQNAFR
701: KYDTRRKIEA AYRIQCRFQT WKIRREYLNM RRQAIRIQAA FRGLQARRQY KKILWSVGVL EKAVLRWRQK RKGFRGLQVA AEEDSPGEAQ EDFYKTSQRQ
801: AEERLERSVV RVQAMFRSKK AQQDYRRMKL THEEAQLEYG CLEDI
101: LKVGNEERIH VYYAHGEDNT TFVRRCYWLL DKARENIVLV HYRDTQEAAT TSGDSISSPI SVSEQTFPNR VAAEDIDTVV RNHDISLHDI NTLDWDELLV
201: PTDLNNQSAP TVDNLSYFTE PLQNAANGTA EHGNATVADG SLDALLNDGP QSRESFGRWM NSFISESNGS LEDPSFEPMV MPRQDPLAPQ AVFHSHSNIP
301: EQVFNITDVS PAWAYSSEKT KILVTGFLHD SYQHLERSNL YCVCGDFCVP AEYLQAGVYR CIIPPHSPGM VNLYLSADGH KPISQCFRFE HRAVPVLDKT
401: VPEDNQDSKW EEFEFQVRLS HLLFTSSNKL NVLSSKISPH NLRDAKKLAS KTNHLLNSWA YLVKSIQGNK VSFDQAKDHL FELSLKNRLK EWLMEKVLEG
501: RNTLDYDSKG LGVIHLCASL GYTWSVQLFS LSGLSLNFRD KQGWTALHWA AYYGREKMVA ALLSAGARPN LVTDSTKDNL GGCMAADLAQ QNGYDGLAAY
601: LAEKCLVAQF RDMKIAGNIT GDLEACKAEM LNQGTLPEDE QSLKDALAAY RTAAEAAARI QGAFREKALK AARSSVIQFA NKEEEAKSII AAMKIQNAFR
701: KYDTRRKIEA AYRIQCRFQT WKIRREYLNM RRQAIRIQAA FRGLQARRQY KKILWSVGVL EKAVLRWRQK RKGFRGLQVA AEEDSPGEAQ EDFYKTSQRQ
801: AEERLERSVV RVQAMFRSKK AQQDYRRMKL THEEAQLEYG CLEDI
Arabidopsis Description
calmodulin binding;transcription regulators [Source:TAIR;Acc:AT3G16940]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.