Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69907 | Canola | nucleus | 96.0 | 95.23 |
| CDX92455 | Canola | cytosol | 56.36 | 88.8 |
| CDX96915 | Canola | nucleus | 7.01 | 88.61 |
| AT5G09410.3 | Thale cress | cytosol | 77.18 | 72.33 |
| CDX81217 | Canola | nucleus | 70.77 | 71.63 |
| CDY18719 | Canola | cytosol | 69.77 | 68.4 |
| CDY61797 | Canola | nucleus | 7.41 | 66.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.61 | 55.02 |
| KRH42152 | Soybean | nucleus | 55.26 | 51.16 |
| KRH10541 | Soybean | nucleus | 55.36 | 50.83 |
| KRH58270 | Soybean | nucleus | 55.16 | 50.64 |
| KRH43898 | Soybean | nucleus | 54.65 | 50.51 |
| CDX81478 | Canola | nucleus | 7.51 | 47.77 |
| Solyc01g105230.2.1 | Tomato | nucleus | 47.75 | 45.87 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 41.84 | 45.24 |
| TraesCS5B01G521100.2 | Wheat | cytosol | 39.94 | 44.78 |
| CDX76935 | Canola | nucleus | 41.94 | 44.24 |
| Zm00001d028007_P004 | Maize | nucleus | 45.15 | 44.0 |
| Os03t0191000-01 | Rice | nucleus | 44.84 | 43.54 |
| GSMUA_Achr6P10390_001 | Banana | nucleus | 46.35 | 43.47 |
| Os10t0375600-01 | Rice | nucleus | 44.14 | 43.11 |
| CDY25585 | Canola | nucleus | 42.64 | 43.03 |
| OQU91909 | Sorghum | cytosol | 43.84 | 42.86 |
| Zm00001d014286_P002 | Maize | nucleus | 44.24 | 42.62 |
| CDX89451 | Canola | nucleus | 43.74 | 42.51 |
| HORVU4Hr1G078620.1 | Barley | cytosol | 45.05 | 42.45 |
| OQU93088 | Sorghum | mitochondrion | 42.04 | 42.25 |
| TraesCS4A01G407100.1 | Wheat | cytosol | 44.64 | 41.84 |
| TraesCS4D01G304500.3 | Wheat | cytosol | 44.64 | 41.84 |
| TraesCS4B01G306300.4 | Wheat | cytosol | 44.64 | 41.8 |
| Zm00001d030518_P005 | Maize | cytosol | 43.84 | 40.07 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.14 | 39.37 |
| CDY69566 | Canola | nucleus | 8.11 | 29.67 |
| CDY07431 | Canola | nucleus | 28.33 | 29.33 |
| CDY28897 | Canola | nucleus | 28.33 | 29.0 |
| CDX95894 | Canola | cytosol | 24.72 | 28.96 |
| CDY51184 | Canola | nucleus | 29.43 | 28.68 |
| CDX92108 | Canola | cytosol | 24.42 | 28.6 |
| CDY58036 | Canola | nucleus | 26.23 | 28.51 |
| CDY22778 | Canola | nucleus | 26.23 | 28.51 |
| CDY12637 | Canola | nucleus | 29.43 | 28.43 |
| CDY45590 | Canola | cytosol | 8.71 | 28.34 |
| CDY01799 | Canola | nucleus | 28.33 | 27.61 |
| CDX96099 | Canola | nucleus | 27.93 | 22.18 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | GO:A0A078G551 | UniProt:A0A078G551 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDY21580 | ProteinID:CDY21580 | ProteinID:CDY21580.1 |
| InterPro:CG-1_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00016043001 |
| InterPro:IPR000048 | InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 |
| InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF03859 |
| PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 | PANTHER:PTHR23335 |
| PANTHER:PTHR23335:SF12 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 | SUPFAM:SSF52540 |
| SUPFAM:SSF81296 | UniParc:UPI0004EF2B0C | SEG:seg | : | : | : |
Description
BnaC09g47120DBnaC09g47120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G551]
Coordinates
chrLK032122:+:323169..328155
Molecular Weight (calculated)
112437.0 Da
IEP (calculated)
6.063
GRAVY (calculated)
-0.508
Length
999 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRGSFGFI SPPRLDMEQL LSEAQHRWLR PAEICEILRN YHKFHIATES PTRPASGSLF LFDRKVLRYF RKDGHNWRKK KDGKTIKEAH EKLKVGSIDV
101: LHCYYAHGEG NENFQRRCYW MLEIELMHIV FVHYLEVKGS RTSIGMKENN SNSLSGTASV NIDSAASPTS RLSSYCEDAD SGDSHQSSSV LRASPEPQTG
201: NRNGWTSAPG MRIASQVLGN RVGETDSQRS FDVQAWDAVE NLVTRYDQPC NNLLVEERTN KFGMLPAEHL RSPLQNQINW QIPAQDDLPL PKWPGYLVPH
301: SGMTDDTDLA LFGQSAQDNF ESFSSLLDIE HLQSDGIPPS DMESEYIPVK KSLLRHEDSL KKVDSFSRWA SKELGEMEDL QMQSSRGDIA WASVDCETAA
401: AGLSFSPSLS EDQRFTIVDY WPKCAQTDAD VEVLVIGTFL LNPQEVTICS WSCMFGEVEV PAEILVDGVL CCHAPPHTAG QVPFYVTCSN RFACSELREF
501: DFLSGSTKKI DAAGIYGYST KEASLQMRFE KLLAHRAFVQ EHQIFEDVVE KRRKISKIML LNEEKENLFP GIYERDSTKQ EPKERVLRKQ FEDELYIWLI
601: HKVTEEGKGP NILDEGGQGV LHFVAALGYD WAIKPILAAG VNINFRDANG WSALHWAAFS GREETVAVLV SLGADAGALT DPSPELPLGK TAADLAYGKE
701: HRGISGFLAE SSLTSYLEKL TMESKENSPA NSGGPKAVQT VSERTAAPMS YGDDSLTAVR NATQAADRLH QVFRMQSFQR KQLSGFDDDD GDEIGISNEL
801: AVSFAASKAK NPGQSEVFVH SAATHIQKKY RGWKKRKEFL LIRQRVVKIQ AHVRGHQVRK QYKPIVWSVG LLEKIILRWR RKGTGLRGFK RNAVPKTVEP
901: EPQCPMIPKE GDYDFLEKGR KQTEERLQKA LTRVKSMVQY PEARDQYRRL LTVVEGFREN EASSSLSVNN REEPVNCEDD DLIDIDSLLN DDILMSTSP
101: LHCYYAHGEG NENFQRRCYW MLEIELMHIV FVHYLEVKGS RTSIGMKENN SNSLSGTASV NIDSAASPTS RLSSYCEDAD SGDSHQSSSV LRASPEPQTG
201: NRNGWTSAPG MRIASQVLGN RVGETDSQRS FDVQAWDAVE NLVTRYDQPC NNLLVEERTN KFGMLPAEHL RSPLQNQINW QIPAQDDLPL PKWPGYLVPH
301: SGMTDDTDLA LFGQSAQDNF ESFSSLLDIE HLQSDGIPPS DMESEYIPVK KSLLRHEDSL KKVDSFSRWA SKELGEMEDL QMQSSRGDIA WASVDCETAA
401: AGLSFSPSLS EDQRFTIVDY WPKCAQTDAD VEVLVIGTFL LNPQEVTICS WSCMFGEVEV PAEILVDGVL CCHAPPHTAG QVPFYVTCSN RFACSELREF
501: DFLSGSTKKI DAAGIYGYST KEASLQMRFE KLLAHRAFVQ EHQIFEDVVE KRRKISKIML LNEEKENLFP GIYERDSTKQ EPKERVLRKQ FEDELYIWLI
601: HKVTEEGKGP NILDEGGQGV LHFVAALGYD WAIKPILAAG VNINFRDANG WSALHWAAFS GREETVAVLV SLGADAGALT DPSPELPLGK TAADLAYGKE
701: HRGISGFLAE SSLTSYLEKL TMESKENSPA NSGGPKAVQT VSERTAAPMS YGDDSLTAVR NATQAADRLH QVFRMQSFQR KQLSGFDDDD GDEIGISNEL
801: AVSFAASKAK NPGQSEVFVH SAATHIQKKY RGWKKRKEFL LIRQRVVKIQ AHVRGHQVRK QYKPIVWSVG LLEKIILRWR RKGTGLRGFK RNAVPKTVEP
901: EPQCPMIPKE GDYDFLEKGR KQTEERLQKA LTRVKSMVQY PEARDQYRRL LTVVEGFREN EASSSLSVNN REEPVNCEDD DLIDIDSLLN DDILMSTSP
0001: MVDRRSFGSI TPPLQLDMEQ LLSEAQHRWL RPTEICEILQ NYHKFHIASE SPTRPASGSL FLFDRKVLRY FRKDGHNWRK KKDGKTIREA HEKLKVGSID
0101: VLHCYYAHGE ANENFQRRCY WMLEQHLMHI VFVHYLEVKG NRTSIGMKEN NSNSVNGTAS VNIDSTASPT STLSSLCEDA DTGDSQQASS VLRPSPEPQT
0201: GNRYGWTPAP GMRNVSQVHG NRVRESDSQR LVDVRALDTV GNSLTRFHDQ PYCNNLLTQM QPSNTDSMLV EENSEKGGRL KAEHIRNPLQ TQFNWQDDTD
0301: LALFEQSAQD NFETFSSLLG SENLQPFGIS YQAPPSNMDS EYMPVMKILR RSEDSLKKVD SFSKWAIKEL GEMEDLQMQS SRGDIAWTTV ECETAAAGIS
0401: LSPSLSEDQR FTIVDFWPKS AKTDAEVEVM VIGTFLLSPQ EVTKYNWSCM FGEVEVPAEI LVDGVLCCHA PPHTAGHVPF YVTCSNRFAC SEVREFDFLS
0501: GSTQKINATD VYGTYTNEAS LQLRFEKMLA HRDFVHEHHI FEDVGDKRRQ ISKIMLLKEE KEYLLPGTYQ RDSTKQEPKG QLFRELFEEE LYIWLIHKVT
0601: EEGKGPNILD EDGQGILHFV AALGYDWAIK PVLAAGVNIN FRDANGWSAL HWAAFSGREE TVAVLVSLGA DAGALTDPSP ELPLGKTAAD LAYANGHRGI
0701: SGFLAESSLT SYLEKLTVDS KENSPANSCG EKAVQTVSER TAAPMTYGDV PEKLSLKDSL TAVRNATQAA DRLHQVFRMQ SFQRKQLCDI GDDEKIDISD
0801: QLAVSFAASK TKNPGQGDVS LSCAATHIQK KYRGWKKRKE FLLIRQRIVK IQAHVRGHQV RKQYRTVIWS VGLLEKIILR WRRKGNGLRG FKRNAVAKTV
0901: EPEPPVSAIC PRIPQEDEYD YLKEGRKQTE ERLQKALTRV KSMVQYPEAR DQYRRLLTVV EGFRENEASS SASINNKEEE AVNCEEDDFI DIESLLNDDT
1001: LMMSISP
0101: VLHCYYAHGE ANENFQRRCY WMLEQHLMHI VFVHYLEVKG NRTSIGMKEN NSNSVNGTAS VNIDSTASPT STLSSLCEDA DTGDSQQASS VLRPSPEPQT
0201: GNRYGWTPAP GMRNVSQVHG NRVRESDSQR LVDVRALDTV GNSLTRFHDQ PYCNNLLTQM QPSNTDSMLV EENSEKGGRL KAEHIRNPLQ TQFNWQDDTD
0301: LALFEQSAQD NFETFSSLLG SENLQPFGIS YQAPPSNMDS EYMPVMKILR RSEDSLKKVD SFSKWAIKEL GEMEDLQMQS SRGDIAWTTV ECETAAAGIS
0401: LSPSLSEDQR FTIVDFWPKS AKTDAEVEVM VIGTFLLSPQ EVTKYNWSCM FGEVEVPAEI LVDGVLCCHA PPHTAGHVPF YVTCSNRFAC SEVREFDFLS
0501: GSTQKINATD VYGTYTNEAS LQLRFEKMLA HRDFVHEHHI FEDVGDKRRQ ISKIMLLKEE KEYLLPGTYQ RDSTKQEPKG QLFRELFEEE LYIWLIHKVT
0601: EEGKGPNILD EDGQGILHFV AALGYDWAIK PVLAAGVNIN FRDANGWSAL HWAAFSGREE TVAVLVSLGA DAGALTDPSP ELPLGKTAAD LAYANGHRGI
0701: SGFLAESSLT SYLEKLTVDS KENSPANSCG EKAVQTVSER TAAPMTYGDV PEKLSLKDSL TAVRNATQAA DRLHQVFRMQ SFQRKQLCDI GDDEKIDISD
0801: QLAVSFAASK TKNPGQGDVS LSCAATHIQK KYRGWKKRKE FLLIRQRIVK IQAHVRGHQV RKQYRTVIWS VGLLEKIILR WRRKGNGLRG FKRNAVAKTV
0901: EPEPPVSAIC PRIPQEDEYD YLKEGRKQTE ERLQKALTRV KSMVQYPEAR DQYRRLLTVV EGFRENEASS SASINNKEEE AVNCEEDDFI DIESLLNDDT
1001: LMMSISP
Arabidopsis Description
EICBP.BEthylene induced calmodulin binding protein [Source:UniProtKB/TrEMBL;Acc:F4KCL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.