Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G306300.4 | Wheat | cytosol | 98.69 | 98.59 |
| TraesCS4A01G407100.1 | Wheat | cytosol | 98.59 | 98.59 |
| HORVU4Hr1G078620.1 | Barley | cytosol | 95.4 | 95.94 |
| Os03t0191000-01 | Rice | nucleus | 78.42 | 81.24 |
| OQU93088 | Sorghum | mitochondrion | 72.51 | 77.77 |
| Zm00001d028007_P004 | Maize | nucleus | 73.26 | 76.2 |
| GSMUA_Achr6P10390_001 | Banana | nucleus | 53.56 | 53.62 |
| TraesCS2D01G169900.1 | Wheat | cytosol | 48.87 | 50.78 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.53 | 50.6 |
| Solyc04g056270.2.1 | Tomato | nucleus | 46.9 | 48.97 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 41.46 | 47.84 |
| Bra038534.1-P | Field mustard | nucleus | 41.56 | 47.63 |
| CDX92455 | Canola | cytosol | 27.95 | 47.0 |
| CDX76935 | Canola | nucleus | 41.56 | 46.78 |
| KRH43177 | Soybean | nucleus | 47.94 | 46.37 |
| KRH42152 | Soybean | nucleus | 46.72 | 46.15 |
| KRH58270 | Soybean | nucleus | 46.9 | 45.96 |
| CDY25585 | Canola | nucleus | 42.59 | 45.86 |
| KRH59333 | Soybean | nucleus | 48.12 | 45.72 |
| KRH10541 | Soybean | nucleus | 46.44 | 45.5 |
| AT2G22300.1 | Thale cress | cytosol | 43.81 | 45.25 |
| Solyc01g105230.2.1 | Tomato | nucleus | 44.0 | 45.1 |
| CDX81217 | Canola | nucleus | 41.74 | 45.09 |
| KRH43898 | Soybean | nucleus | 45.5 | 44.87 |
| CDX89451 | Canola | nucleus | 43.15 | 44.75 |
| Bra030248.1-P | Field mustard | nucleus | 43.25 | 44.71 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 41.84 | 44.64 |
| AT5G64220.2 | Thale cress | nucleus | 43.81 | 44.48 |
| Bra009382.1-P | Field mustard | nucleus | 41.84 | 44.29 |
| CDX69907 | Canola | nucleus | 41.84 | 44.29 |
| CDY18719 | Canola | cytosol | 41.46 | 43.38 |
| Bra037769.1-P | Field mustard | cytosol | 41.56 | 43.09 |
| AT5G09410.3 | Thale cress | cytosol | 40.9 | 40.9 |
| VIT_07s0141g00250.t01 | Wine grape | nucleus | 48.03 | 37.84 |
| TraesCS2D01G282800.6 | Wheat | nucleus | 28.89 | 29.9 |
| TraesCS3D01G426700.5 | Wheat | nucleus | 22.7 | 29.58 |
| TraesCS2D01G237300.2 | Wheat | cytosol | 24.58 | 28.89 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:CG-1_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR000048 | InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 |
| InterPro:IPT_dom | InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 |
| PFAM:PF01833 | PFAM:PF03859 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 |
| PANTHER:PTHR23335 | PANTHER:PTHR23335:SF7 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 |
| SUPFAM:SSF52540 | SUPFAM:SSF81296 | EnsemblPlantsGene:TraesCS4D01G304500 | EnsemblPlants:TraesCS4D01G304500.3 | TIGR:cd00102 | TIGR:cd00204 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:472932695..472940905
Molecular Weight (calculated)
119170.0 Da
IEP (calculated)
5.884
GRAVY (calculated)
-0.552
Length
1066 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEGRRYGIA PQLDMEQILK EAQTRWLRPT EICEILKNYR NFRIAPEPPN MPASGSLFLF DRKVLRFFRK DGHNWRKKKD GKTVKEAHER LKSGSIDVLH
0101: CYYAHGEENI NFQRRSYWML EEDYMHIVLV HYLEVKAGKS SSRTRGHDNM LQGAYVDSPL SHLPSQSTDG ESSLSGRASE YEAESADIYS GGAGYHSISR
0201: MQQHENGGGS IIDASVVSSY SPASSVGNHQ GLQATSPNTG FYSHYQDNSP VIHNESTHGI TFNGPSTQFD LSSWNEMTKM NKGIHQLPPY QSHVPSEQRP
0301: FTEGPGIESF SFDEVYSNGL DIKDDGHADT DREALWQLPS ANDGTTTEFL QLPSAIDGRT TEFQLPSATD STFATVDSFE QNNKLLEEAI NFPVLKTQSS
0401: NLSDILKNSF KKSDSFTRWM SKELAEVDDS QVKSSSALYW NSEDADNIIG ASSRDQLDQF TLDPMVAQDQ LFSITEYFPS WTYAGSKTRV LVTGRFLTSD
0501: EVIKLKWSCM FGEVEVPADI LADGTLRCYS PSHKPGRVPF YVTCSNRLAC SEVREFEYRP SDSQYMDAPS PHGATNKIYL QARLDELLSL GQDEQDEFQA
0601: ALSNPTKELI DLNKKITSLM TNNDQWSELL KFADDNQLAP DDRQDQFVES GIKEKLHIWL LHKAGGGGKG PSVLDDEGQG VLHLAAALGY DWAIRPTITA
0701: GVSINFRDVH GWTALHWAAF CGRERTVVAL IALGAAPGAL TDPRPDFPSG RTPADLASFN GHKGISGFLA EFSLTSHLQT LNLKEAMGSN ASEISGLPGI
0801: GDVTGRIASP SAGQGLQAGS MGDSLGAVRN AAQAAARIYQ VFRVQSFQRK QAVQYEDDNG VISDERAMSL LSYKPSKPGQ FDPMHAAATR IQNKFRGWKG
0901: RKEFLLIRQR IVKIQAHVRG HQVRKHYRKI IWSVGIVEKV ILRWRRRGAG LRGFRSTEVA TDSSTSSSSV DVIPVKPAED DYNFLQEGRK QTEERLQRAL
1001: ARVKSMVQYP EARDQYQRIL TVVTKMQESQ PVEESMLEES TEMDEGFLMS EFKELWDDDV PLPGYF
0101: CYYAHGEENI NFQRRSYWML EEDYMHIVLV HYLEVKAGKS SSRTRGHDNM LQGAYVDSPL SHLPSQSTDG ESSLSGRASE YEAESADIYS GGAGYHSISR
0201: MQQHENGGGS IIDASVVSSY SPASSVGNHQ GLQATSPNTG FYSHYQDNSP VIHNESTHGI TFNGPSTQFD LSSWNEMTKM NKGIHQLPPY QSHVPSEQRP
0301: FTEGPGIESF SFDEVYSNGL DIKDDGHADT DREALWQLPS ANDGTTTEFL QLPSAIDGRT TEFQLPSATD STFATVDSFE QNNKLLEEAI NFPVLKTQSS
0401: NLSDILKNSF KKSDSFTRWM SKELAEVDDS QVKSSSALYW NSEDADNIIG ASSRDQLDQF TLDPMVAQDQ LFSITEYFPS WTYAGSKTRV LVTGRFLTSD
0501: EVIKLKWSCM FGEVEVPADI LADGTLRCYS PSHKPGRVPF YVTCSNRLAC SEVREFEYRP SDSQYMDAPS PHGATNKIYL QARLDELLSL GQDEQDEFQA
0601: ALSNPTKELI DLNKKITSLM TNNDQWSELL KFADDNQLAP DDRQDQFVES GIKEKLHIWL LHKAGGGGKG PSVLDDEGQG VLHLAAALGY DWAIRPTITA
0701: GVSINFRDVH GWTALHWAAF CGRERTVVAL IALGAAPGAL TDPRPDFPSG RTPADLASFN GHKGISGFLA EFSLTSHLQT LNLKEAMGSN ASEISGLPGI
0801: GDVTGRIASP SAGQGLQAGS MGDSLGAVRN AAQAAARIYQ VFRVQSFQRK QAVQYEDDNG VISDERAMSL LSYKPSKPGQ FDPMHAAATR IQNKFRGWKG
0901: RKEFLLIRQR IVKIQAHVRG HQVRKHYRKI IWSVGIVEKV ILRWRRRGAG LRGFRSTEVA TDSSTSSSSV DVIPVKPAED DYNFLQEGRK QTEERLQRAL
1001: ARVKSMVQYP EARDQYQRIL TVVTKMQESQ PVEESMLEES TEMDEGFLMS EFKELWDDDV PLPGYF
0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
Arabidopsis Description
CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.