Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G300800.2 | Wheat | nucleus | 98.16 | 98.35 |
| TraesCS2A01G283800.1 | Wheat | nucleus | 97.67 | 97.96 |
| HORVU2Hr1G069950.6 | Barley | nucleus | 92.82 | 93.36 |
| Os04t0388500-01 | Rice | nucleus | 73.59 | 75.57 |
| OQU81398 | Sorghum | nucleus | 71.26 | 73.77 |
| Zm00001d003958_P013 | Maize | nucleus | 69.51 | 73.14 |
| Zm00001d025235_P004 | Maize | nucleus | 68.06 | 69.89 |
| Zm00001d009281_P001 | Maize | cytosol | 12.91 | 67.17 |
| GSMUA_Achr9P01330_001 | Banana | nucleus | 54.47 | 52.92 |
| VIT_14s0036g00610.t01 | Wine grape | plastid | 7.48 | 52.03 |
| KRH15615 | Soybean | cytosol | 15.44 | 50.16 |
| PGSC0003DMT400084738 | Potato | cytosol | 31.46 | 47.37 |
| VIT_01s0010g03850.t01 | Wine grape | nucleus | 43.2 | 45.97 |
| Solyc05g015650.2.1 | Tomato | nucleus | 41.65 | 45.88 |
| KRH58784 | Soybean | nucleus | 42.62 | 44.66 |
| KRH31521 | Soybean | nucleus | 39.32 | 44.51 |
| KRH42689 | Soybean | cytosol | 40.78 | 43.52 |
| Solyc12g035520.1.1 | Tomato | nucleus | 40.68 | 43.06 |
| KRG97392 | Soybean | nucleus | 40.19 | 43.04 |
| CDY07431 | Canola | nucleus | 38.64 | 41.24 |
| Bra034007.1-P | Field mustard | nucleus | 39.9 | 40.61 |
| Bra004096.1-P | Field mustard | nucleus | 38.35 | 40.6 |
| CDY28897 | Canola | nucleus | 38.35 | 40.47 |
| CDY51184 | Canola | nucleus | 40.0 | 40.2 |
| CDY12637 | Canola | nucleus | 40.1 | 39.94 |
| Bra004217.1-P | Field mustard | nucleus | 38.45 | 39.72 |
| AT1G67310.1 | Thale cress | cytosol | 38.74 | 39.27 |
| TraesCS3D01G426700.5 | Wheat | nucleus | 30.87 | 38.88 |
| CDY01799 | Canola | nucleus | 38.06 | 38.24 |
| CDX96099 | Canola | nucleus | 38.35 | 31.4 |
| TraesCS2D01G169900.1 | Wheat | cytosol | 29.71 | 29.82 |
| TraesCS2D01G237300.2 | Wheat | cytosol | 25.53 | 29.0 |
| TraesCS4D01G304500.3 | Wheat | cytosol | 29.9 | 28.89 |
| Bra004218.1-P | Field mustard | nucleus | 0.19 | 0.68 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:CG-1_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR000048 |
| InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IPT_dom |
| InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF01833 |
| PFAM:PF03859 | PFAM:PF13637 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 |
| PANTHER:PTHR23335 | PANTHER:PTHR23335:SF1 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 |
| SUPFAM:SSF52540 | SUPFAM:SSF81296 | EnsemblPlantsGene:TraesCS2D01G282800 | EnsemblPlants:TraesCS2D01G282800.6 | TIGR:cd00102 | TIGR:cd00204 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:355677319..355684594
Molecular Weight (calculated)
114916.0 Da
IEP (calculated)
5.182
GRAVY (calculated)
-0.504
Length
1030 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIDCFNSCIT KGFDINVLLR EAKSRWLKPS EVYYILLNHE QLQITHEPPN KPPSGALFLY NRRVNRFFRK DGYAWRRKKD GRTVGEAHER LKVGNIDALS
0101: CYYAHGEQNP YFQRRCFWML EPAYDHIVLV QYREVAEGRY YSTLSNGSAG SLSTLSYPND IHGKHGSTSD FSEGNESHQS SVTEVSSYSA NKEYNHDSGV
0201: LLSIPELQQS TVMGIPELDQ SSLERSSEFC MVNNNDSTNT SGLNQALKSI AEQLSLGDDD YIYINQARSL DFTTNTEAAD VQGNQTNNSL ADDEANQIRP
0301: EGAHGVGRGI SSSWENVLQS DLGLPASSTY QFGAHYQQSS EYQPPGGLDS SNLQLQISAA KRFLLGSEDT IDSPSYNFIP RDEGINGINT LSAHDSSLES
0401: CLNPDWQRTT PVTLQSSSYQ SNSCGYEISE FFDNGQFEPS SEEDTRLALK QKQQFSIREI SPEWAFCYEI TKVIITGDFL CDPSNICWAV MFGDTEVPVE
0501: IVQPGVLRCH TPLHSAGKLT LCITTGNRKV CSEIKDFEFR AKSTASSFTD FAPSSMKSTE ELSLIAKFAR ILLCDNRSSA ASGDDPQPGQ SPKLKMNEDN
0601: WQRLINELDV GCENPLSRVD WIMEELLKSK LQQWLSLRLQ GDDGTCSLSK NEQGIIHLIS ALGYDWALSS VLGAGVGINL RDSNGWTALH WAAYYGREKM
0701: VAALLAAGAS APAVTDPTAQ DPVGKSAAFL ASERGHVGLA GYLSEVALTS YLASLTIEES GISEGLAAIE AERAVESISQ RSAQLHGGTE DELSLKDSLA
0801: AVRNAAQAAA RIQNAFRAFS FRRRQHKDAR LKDEYGMTQE DIDELAAASR LYYQHHVSNG QFCDKAAVSI QKKYRGWKGR KNFLQMRRNV VKIQAHVRGH
0901: QVRKKYKTFV STVSVLEKVI LRWRRKGHGL RGFRAEQSVM IEAEEGEEED DDEFDDDEAV KIFRRQKVDE SVKESVSRVL SMVDSPEARM QYRRMLEEFR
1001: QATAELGASD KATSSILDND LLVEIDKFTC
0101: CYYAHGEQNP YFQRRCFWML EPAYDHIVLV QYREVAEGRY YSTLSNGSAG SLSTLSYPND IHGKHGSTSD FSEGNESHQS SVTEVSSYSA NKEYNHDSGV
0201: LLSIPELQQS TVMGIPELDQ SSLERSSEFC MVNNNDSTNT SGLNQALKSI AEQLSLGDDD YIYINQARSL DFTTNTEAAD VQGNQTNNSL ADDEANQIRP
0301: EGAHGVGRGI SSSWENVLQS DLGLPASSTY QFGAHYQQSS EYQPPGGLDS SNLQLQISAA KRFLLGSEDT IDSPSYNFIP RDEGINGINT LSAHDSSLES
0401: CLNPDWQRTT PVTLQSSSYQ SNSCGYEISE FFDNGQFEPS SEEDTRLALK QKQQFSIREI SPEWAFCYEI TKVIITGDFL CDPSNICWAV MFGDTEVPVE
0501: IVQPGVLRCH TPLHSAGKLT LCITTGNRKV CSEIKDFEFR AKSTASSFTD FAPSSMKSTE ELSLIAKFAR ILLCDNRSSA ASGDDPQPGQ SPKLKMNEDN
0601: WQRLINELDV GCENPLSRVD WIMEELLKSK LQQWLSLRLQ GDDGTCSLSK NEQGIIHLIS ALGYDWALSS VLGAGVGINL RDSNGWTALH WAAYYGREKM
0701: VAALLAAGAS APAVTDPTAQ DPVGKSAAFL ASERGHVGLA GYLSEVALTS YLASLTIEES GISEGLAAIE AERAVESISQ RSAQLHGGTE DELSLKDSLA
0801: AVRNAAQAAA RIQNAFRAFS FRRRQHKDAR LKDEYGMTQE DIDELAAASR LYYQHHVSNG QFCDKAAVSI QKKYRGWKGR KNFLQMRRNV VKIQAHVRGH
0901: QVRKKYKTFV STVSVLEKVI LRWRRKGHGL RGFRAEQSVM IEAEEGEEED DDEFDDDEAV KIFRRQKVDE SVKESVSRVL SMVDSPEARM QYRRMLEEFR
1001: QATAELGASD KATSSILDND LLVEIDKFTC
0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
Arabidopsis Description
CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.