CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97392	Soybean	nucleus	90.77	85.86
KRH15615	Soybean	cytosol	23.3	66.88
KRH58784	Soybean	nucleus	65.49	60.63
KRH42689	Soybean	cytosol	63.41	59.79
Zm00001d009281_P001	Maize	cytosol	9.78	44.95
OQU81398	Sorghum	nucleus	45.05	41.21
Zm00001d003958_P013	Maize	nucleus	43.96	40.86
Os04t0388500-01	Rice	nucleus	44.95	40.78
TraesCS2B01G300800.2	Wheat	nucleus	45.05	39.88
TraesCS2A01G283800.1	Wheat	nucleus	44.84	39.73
HORVU2Hr1G069950.6	Barley	nucleus	44.51	39.55
EES01985	Sorghum	nucleus	36.59	39.41
TraesCS2D01G282800.6	Wheat	nucleus	44.51	39.32
Zm00001d025235_P004	Maize	nucleus	43.19	39.18
Os01t0923600-02	Rice	nucleus	35.82	37.13
TraesCS3B01G469100.2	Wheat	cytosol	32.64	36.89
TraesCS3A01G433300.2	Wheat	nucleus	33.19	36.78
TraesCS3D01G426700.5	Wheat	nucleus	32.64	36.31
Zm00001d042313_P004	Maize	nucleus	35.27	35.99
HORVU3Hr1G094860.7	Barley	cytosol, nucleus, plastid	31.76	34.2
KRH02436	Soybean	nucleus	32.75	29.83
KRH10541	Soybean	nucleus	35.27	29.5
KRH50762	Soybean	nucleus	29.56	29.21
KRH11981	Soybean	nucleus	29.23	29.2
KRH02327	Soybean	nucleus	29.56	29.18
KRH43898	Soybean	nucleus	34.62	29.14
KRH37009	Soybean	nucleus	29.12	29.09
KRH43177	Soybean	nucleus	35.16	29.04
KRH42152	Soybean	nucleus	34.4	29.01
KRH58270	Soybean	nucleus	34.51	28.86
KRH59333	Soybean	nucleus	35.27	28.61

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	EntrezGene:100787909	MapMan:15.5.26	Gene3D:2.60.40.10	EMBL:ACUP02007146
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	ncoils:Coil	EnsemblPlantsGene:GLYMA_11G251900
GO:GO:0001077	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
GO:GO:0045944	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683
InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:K7LRY7
EnsemblPlants:KRH31521	ProteinID:KRH31521	ProteinID:KRH31521.1	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859
PFAM:PF12796	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335
PANTHER:PTHR23335:SF1	SMART:SM00015	SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF81296
UniParc:UPI000295C2A1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:34314109..34322408

Molecular Weight (calculated)

102400.0 Da

IEP (calculated)

5.580

GRAVY (calculated)

-0.531

Length

910 amino acids

Sequence
(BLAST)

001: MAGLEYSIDD LFQEAKRRWL KPVEALYILR NHDQCKFTHQ PPHQPAGGSL FLFNRRIMRS FRKDGHNWRK KKDGKTVGEA HERLKVGNVE ILNCYYAHGE
101: ENRTFQRRSY WMLEPEYDHI VLVHYRETSE GKSNSEHVTQ LPSEVTFEAQ ALRQLEEQLS LNDDGFNEIA LDLVSGQDQR VVYKQDKSAA LSGPNDLGQP
201: CDGYNGRQDD SGTYYHDFLD DCPGGNEKTI YWTKVLESCK PLSVTKLPDQ HAYEAIGNEN TLFSSGRGVI ANLENNQWLN SNSNNIENYG GVKFPPYSLA
301: ETPGANSDYY ETFFDQFQNQ GPLGVDSSLT VVQKQKFTIR AVSPEYCYST ETTKVIIIGS FLCHDSDSTW ACMFGDVEVP AEIIQDGIIC CEAPSNHLGK
401: VNLCITSGNR VPCSEMREFE FRNKTTSCTR CNSLETEGSK SPEDLLLLVR FAEMLLSSST TKDDRIESGS HLSTEQKDDD DSWSHIIDTL LDSTRTPSDA
501: VKWLLEELLK DKLQLWLSNR RDEGTGCSLS KKEQGIIHMV SGLGFEWALN PILSCGVNIN FRDINGWTAL HWAARFGREK MVASLIASGA SAGAVTDPSS
601: QDPTGKTAAS IAASHDHKGL AGYLSEVDLT SHLSSLTLEE SELSRESSEL EAELTVSSVS EENLVASEDQ VSLKASLDAV RNAAQAAARI QAAFRAHSFR
701: KRKERDAAAT VLDGYCIDAG SIDNNISVLS AMSKLSSQSW RDYKAALSIQ KKYRNWKGRI EFLALRQKIV KIQACVRGYQ VRKQYKLILW AVGILDKVVL
801: RWRRKRIGIQ SVRQEMESNE EESDDADFLN VFRKEKVNAA IEKALKRVLS MVHSTGARQQ YRRLLSLYRQ AKIEHGSTSD EAPLSTSEEN ASNMEDDDLC
901: QFLDTFFWPS

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.