Factsheet for Os01t0923600-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01985	Sorghum	nucleus	66.06	68.64
TraesCS3B01G469100.2	Wheat	cytosol	60.14	65.59
TraesCS3A01G433300.2	Wheat	nucleus	60.93	65.16
TraesCS3D01G426700.5	Wheat	nucleus	60.36	64.79
Zm00001d042313_P004	Maize	nucleus	63.78	62.78
HORVU3Hr1G094860.7	Barley	cytosol, nucleus, plastid	59.91	62.25
KRH15615	Soybean	cytosol	14.92	41.32
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	36.67	40.76
VIT_14s0036g00610.t01	Wine grape	plastid	6.72	39.86
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	35.08	39.49
VIT_01s0010g03850.t01	Wine grape	nucleus	39.86	36.16
Solyc05g015650.2.1	Tomato	nucleus	38.5	36.15
KRH58784	Soybean	nucleus	40.2	35.91
KRH31521	Soybean	nucleus	37.13	35.82
KRH42689	Soybean	cytosol	39.18	35.65
PGSC0003DMT400084738	Potato	cytosol	27.45	35.23
Os04t0388500-01	Rice	nucleus	40.2	35.19
KRG97392	Soybean	nucleus	38.38	35.03
Os03t0388500-01	Rice	cytosol, peroxisome	11.85	35.02
Solyc12g035520.1.1	Tomato	nucleus	38.27	34.53
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	43.28	33.6
Bra034007.1-P	Field mustard	nucleus	38.04	33.0
Bra004217.1-P	Field mustard	nucleus	37.13	32.7
CDY51184	Canola	nucleus	37.93	32.49
Bra004096.1-P	Field mustard	nucleus	35.99	32.48
CDY07431	Canola	nucleus	35.65	32.44
CDY12637	Canola	nucleus	37.93	32.2
CDY28897	Canola	nucleus	35.76	32.17
CDY01799	Canola	nucleus	37.47	32.1
AT1G67310.1	Thale cress	cytosol	37.02	31.99
Os07t0623100-01	Rice	cytosol	8.77	27.4
Os03t0191000-01	Rice	nucleus	30.87	26.34
Os07t0490200-01	Rice	nucleus	27.45	26.0
Os10t0375600-01	Rice	nucleus	30.18	25.9
CDX96099	Canola	nucleus	36.9	25.76
Bra004218.1-P	Field mustard	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	EntrezGene:4327253	EMBL:AK068932
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:BAD88303.1	ProteinID:BAD88325.1	ProteinID:BAF07154.1
ProteinID:BAS75958.1	InterPro:CG-1_dom	ProteinID:EEE55914.1	GO:GO:0001077	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006366	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0045944	InterPro:IPR000048	InterPro:IPR002110
InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold
InterPro:Ig_E-set	EnsemblPlantsGene:Os01g0923600	EnsemblPlants:Os01t0923600-02	PFAM:PF00612	PFAM:PF03859	PFAM:PF13637
PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF8
UniProt:Q5JJP3	SMART:SM00015	SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF81296
UniParc:UPI00004C2C10	RefSeq:XP_015649554.1	SEG:seg	:	:	:

Description

CaM-binding transcription factor homolog, OsCBT homolog, CBT homolog, QTL for seedling cold tolerance on chromosome 1, calmodulin-binding transcription activatorHypothetical conserved gene. (Os01t0923600-01);Ankyrin domain containing protein. (Os01t0923600-02);Hypothetical conserved gene. (Os01t0923600-03)

Coordinates

chr1:+:40397335..40403249

Molecular Weight (calculated)

99361.4 Da

IEP (calculated)

7.603

GRAVY (calculated)

-0.533

Length

878 amino acids

Sequence
(BLAST)

001: MQHQQGFDTH RLHQEVKSRW LKPKEVLQIL QNHDRFIITH KTPHKPPSGA WFLFNRRVLR YFRNDGYEWR KKKNGKTIAE AHERLKVDNV DALNCYYAHA
101: DKNSTFQRRI YWMLDPAYDH IVFVHYRDVQ EGSISVSALN DSSTSNQNGS GSRAEAQSSP GLTSELFAPC LNSCSPGSAE EVSSQIMAIN NETNSVSQPD
201: WVQHCNQAAL RKLKVQLSLE DREDHDVDAK DIPSNSEPIT VYGIQNEEPG TCRNLADVFS GLEFSKENHP EETGLPFSST IDVLKNSDTW LEEDQIEAIL
301: HSASMIVTEN QWFNIREVSP EWSYCSESTK VIIAGDFLRD PSHGSWAIVF GDVKVHAEIV QQGVIRCHTP CLDARKVTMY LIDENEKACS EARQFEFHNK
401: PTKSVVCENR KPCREVHESE LHQRPTESNN ELLLLFNYAQ LLFDGHVSEQ FLKFGLPFPN LECGLQVSPS EIMKGASERL NRDTAVNCVM EVLLNNKFEE
501: WLFSKYEQNS EGNHFLPRQY HGVIHTIAAL GYNWALKLLL NSGVLVNYRD ANGWTALHWA ARFGREETVV LLLDAGAAAG ALSDPTAQDP AAKTPASVAS
601: AYGFKGLSAY LSEAELIAHL HSLESKENGS SGDQISRVVG RISDTSAHAQ SGSDDQLALK ESLGAMRYAV QAAGRIQTAF RIFSFRKKQQ AGLQNRGNHI
701: ISIREVGAAS HGMLEKAALS IQKNFRCWKK RKEFLKIRKN VIKIQARVRA HQQHNKYKEL LRSVGILEKV MLRWYRKGVG LRGFHPGAIA MPIDEEDEDD
801: VAKVFRKQRV ETALNKAVSR VSSIIDSPVA RQQYRRMLKM HKQNKDDDEK VEVSPASHVY GSGSHHMCWL SHNNKAMH

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.