Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G078620.1 | Barley | cytosol | 81.92 | 79.53 |
| TraesCS4D01G304500.3 | Wheat | cytosol | 81.24 | 78.42 |
| OQU93088 | Sorghum | mitochondrion | 75.7 | 78.37 |
| TraesCS4B01G306300.4 | Wheat | cytosol | 81.24 | 78.35 |
| TraesCS4A01G407100.1 | Wheat | cytosol | 80.66 | 77.86 |
| Zm00001d028007_P004 | Maize | nucleus | 76.77 | 77.07 |
| Os10t0375600-01 | Rice | nucleus | 73.66 | 74.1 |
| TraesCS5B01G521100.2 | Wheat | cytosol | 63.27 | 73.06 |
| Os03t0388500-01 | Rice | cytosol, peroxisome | 17.49 | 60.61 |
| Os07t0623100-01 | Rice | cytosol | 14.67 | 53.74 |
| GSMUA_Achr6P10390_001 | Banana | nucleus | 55.3 | 53.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 44.41 | 49.84 |
| Solyc04g056270.2.1 | Tomato | nucleus | 48.69 | 49.07 |
| CDX92455 | Canola | cytosol | 29.64 | 48.11 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 43.05 | 47.94 |
| Bra038534.1-P | Field mustard | nucleus | 43.15 | 47.74 |
| CDX76935 | Canola | nucleus | 42.95 | 46.67 |
| KRH43177 | Soybean | nucleus | 49.47 | 46.19 |
| KRH59333 | Soybean | nucleus | 49.95 | 45.81 |
| CDX81217 | Canola | nucleus | 43.63 | 45.49 |
| KRH42152 | Soybean | nucleus | 47.52 | 45.32 |
| KRH10541 | Soybean | nucleus | 47.72 | 45.13 |
| KRH58270 | Soybean | nucleus | 47.42 | 44.85 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 43.54 | 44.84 |
| AT2G22300.1 | Thale cress | cytosol | 44.9 | 44.77 |
| AT5G64220.2 | Thale cress | nucleus | 45.68 | 44.76 |
| CDY25585 | Canola | nucleus | 43.05 | 44.75 |
| KRH43898 | Soybean | nucleus | 46.84 | 44.59 |
| Bra009382.1-P | Field mustard | nucleus | 43.54 | 44.49 |
| CDX69907 | Canola | nucleus | 43.54 | 44.49 |
| Solyc01g105230.2.1 | Tomato | nucleus | 44.61 | 44.13 |
| CDX89451 | Canola | nucleus | 44.02 | 44.07 |
| Bra030248.1-P | Field mustard | nucleus | 43.93 | 43.84 |
| Bra037769.1-P | Field mustard | cytosol | 43.44 | 43.48 |
| CDY18719 | Canola | cytosol | 42.95 | 43.38 |
| AT5G09410.3 | Thale cress | cytosol | 43.63 | 42.12 |
| VIT_07s0141g00250.t01 | Wine grape | nucleus | 49.85 | 37.92 |
| Os01t0923600-02 | Rice | nucleus | 26.34 | 30.87 |
| Os04t0388500-01 | Rice | nucleus | 29.93 | 30.71 |
| Os07t0490200-01 | Rice | nucleus | 25.75 | 28.59 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | ProteinID:BAF11144.1 | ProteinID:BAS82717.1 | InterPro:CG-1_dom | ncoils:Coil | GO:GO:0001077 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045944 |
| InterPro:IPR000048 | InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 |
| InterPro:IPT_dom | InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | EnsemblPlantsGene:Os03g0191000 | EnsemblPlants:Os03t0191000-01 |
| InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF01833 | PFAM:PF03859 | PFscan:PS50088 | PFscan:PS50096 |
| PFscan:PS50297 | PFscan:PS51437 | PANTHER:PTHR23335 | PANTHER:PTHR23335:SF7 | UniProt:Q0DUE4 | SMART:SM00015 |
| SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 | SUPFAM:SSF52540 | SUPFAM:SSF81296 | UniParc:UPI0000E11F6D |
| SEG:seg | : | : | : | : | : |
Description
Similar to CG-1 protein (Fragment). (Os03t0191000-01)
Coordinates
chr3:-:4726165..4734003
Molecular Weight (calculated)
115039.0 Da
IEP (calculated)
5.803
GRAVY (calculated)
-0.569
Length
1029 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEGRRYAIA PQLDIEQILK EAQRRWLRPT EICEILKNYR SFRIAPEPPN RPPSGSLFLF DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKSGSIDVLH
0101: CYYAHGEENI NFQRRSYWML EEDYMHIVLV HYLEVKAGKL SSRSTGHDDV LQASHADSPL SQLPSQTTEG ESSVSGQASE YDETESDIYS GGARYNSFSR
0201: MRQHENGGGS VIDDSIFSSY VPASSVGNYQ GLQATAPNTG FYSHGQDNLP VVLNESDLGT AFNGPNSQFD LSLWIEAMKP DKGTHQIPLY QAPVPSEQSP
0301: FTGGPGIESF TFDEVYNNGL SIKDVDGDDT DGETPWQIPN ASGTFATADS FQQNDKTLEE AINYPLLKTQ SSSLSDIIKD SFKKNDSFTR WMSKELAEVD
0401: DSQITSSSGV YWNSEEADNI IEASSSDQYT LGPVLAQDQL FTIVDFSPTW TYAGSKTRVF IKGNFLSSDE VKRLKWSCMF GEFEVPAEII ADDTLVCHSP
0501: SHKPGRVPFY VTCSNRLACS EVREFDFRPQ YMDAPSPLGS TNKIYLQKRL DKLLSVEQDE IQTTLSNPTK EIIDLSKKIS SLMMNNDDWS ELLKLADDNE
0601: PATDDKQDQF LQNRIKEKLH IWLLHKVGDG GKGPSMLDEE GQGVLHLAAA LGYDWAIRPT IAAGVNINFR DAHGWTALHW AAFCGRERTV VALIALGAAP
0701: GAVTDPTPSF PSGSTPADLA SANGHKGISG FLAESSLTSH LQTLNLKEAM RSSAGEISGL PGIVNVADRS ASPLAVEGHQ TGSMGDSLGA VRNAAQAAAR
0801: IYQVFRMQSF QRKQAVQYED ENGAISDERA MSLLSAKPSK PAQLDPLHAA ATRIQNKFRG WKGRKEFLLI RQRIVKIQAH VRGHQVRKHY RKIIWSVGIV
0901: EKVILRWRRR GAGLRGFRPT ENAVTESTSS SSGNVTQNRP AENDYDFLQE GRKQTEERLQ KALARVKSMV QYPDARDQYQ RILTVVTKMQ ESQAMQEKML
1001: EESTEMDEGL LMSEFKELWD DDMPTPGYF
0101: CYYAHGEENI NFQRRSYWML EEDYMHIVLV HYLEVKAGKL SSRSTGHDDV LQASHADSPL SQLPSQTTEG ESSVSGQASE YDETESDIYS GGARYNSFSR
0201: MRQHENGGGS VIDDSIFSSY VPASSVGNYQ GLQATAPNTG FYSHGQDNLP VVLNESDLGT AFNGPNSQFD LSLWIEAMKP DKGTHQIPLY QAPVPSEQSP
0301: FTGGPGIESF TFDEVYNNGL SIKDVDGDDT DGETPWQIPN ASGTFATADS FQQNDKTLEE AINYPLLKTQ SSSLSDIIKD SFKKNDSFTR WMSKELAEVD
0401: DSQITSSSGV YWNSEEADNI IEASSSDQYT LGPVLAQDQL FTIVDFSPTW TYAGSKTRVF IKGNFLSSDE VKRLKWSCMF GEFEVPAEII ADDTLVCHSP
0501: SHKPGRVPFY VTCSNRLACS EVREFDFRPQ YMDAPSPLGS TNKIYLQKRL DKLLSVEQDE IQTTLSNPTK EIIDLSKKIS SLMMNNDDWS ELLKLADDNE
0601: PATDDKQDQF LQNRIKEKLH IWLLHKVGDG GKGPSMLDEE GQGVLHLAAA LGYDWAIRPT IAAGVNINFR DAHGWTALHW AAFCGRERTV VALIALGAAP
0701: GAVTDPTPSF PSGSTPADLA SANGHKGISG FLAESSLTSH LQTLNLKEAM RSSAGEISGL PGIVNVADRS ASPLAVEGHQ TGSMGDSLGA VRNAAQAAAR
0801: IYQVFRMQSF QRKQAVQYED ENGAISDERA MSLLSAKPSK PAQLDPLHAA ATRIQNKFRG WKGRKEFLLI RQRIVKIQAH VRGHQVRKHY RKIIWSVGIV
0901: EKVILRWRRR GAGLRGFRPT ENAVTESTSS SSGNVTQNRP AENDYDFLQE GRKQTEERLQ KALARVKSMV QYPDARDQYQ RILTVVTKMQ ESQAMQEKML
1001: EESTEMDEGL LMSEFKELWD DDMPTPGYF
0001: MADRGSFGFA PRLDIKQLLS EAQHRWLRPA EICEILRNHQ KFHIASEPPN RPPSGSLFLF DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH
0101: CYYAHGEDNE NFQRRCYWML EQDLMHIVFV HYLEVKGNRM STSGTKENHS NSLSGTGSVN VDSTATRSSI LSPLCEDADS GDSRQASSSL QQNPEPQTVV
0201: PQIMHHQNAS TINSYNTTSV LGNRDGWTSA HGNRVKGSNS QRSGDVPAWD ASFENSLARY QNLPYNAPLT QTQPSTFGLI PMEGKTEKGS LLTSEHLRNP
0301: LQSQVNWQTP VQESVPLQKW PMDSHSGMTD ATDLALFGQG AHENFGTFSS LLGSQDQQSS SFQAPFTNNE AAYIPKLGPE DLIYEASANQ TLPLRKALLK
0401: KEDSLKKVDS FSRWVSKELG EMEDLQMQSS SGGIAWTSVE CENAAAGSSL SPSLSEDQRF TMIDFWPKWT QTDSEVEVMV IGTFLLSPQE VTSYSWSCMF
0501: GEVEVPADIL VDGVLCCHAP PHEVGRVPFY ITCSDRFSCS EVREFDFLPG STRKLNATDI YGANTIETSL HLRFENLLAL RCSVQEHHIF ENVGEKRRKI
0601: SKIMLLKDEK EPPLPGTIEK DLTELEAKER LIREEFEDKL YLWLIHKVTE EGKGPNILDE DGQGVLHLAA ALGYDWAIKP ILAAGVSINF RDANGWSALH
0701: WAAFSGREDT VAVLVSLGAD AGALADPSPE HPLGKTAADL AYGNGHRGIS GFLAESSLTS YLEKLTVDAK ENSSADSSGA KAVLTVAERT ATPMSYGDVP
0801: ETLSMKDSLT AVLNATQAAD RLHQVFRMQS FQRKQLSELG GDNKFDISDE LAVSFAAAKT KKSGHSSGAV HAAAVQIQKK YRGWKKRKEF LLIRQRIVKI
0901: QAHVRGHQVR KQYRAIIWSV GLLEKIILRW RRKGSGLRGF KRDTISKPTE PVCPAPQEDD YDFLKEGRKQ TEERLQKALT RVKSMAQYPE ARAQYRRLLT
1001: VVEGFRENEA SSSSALKNNT EEAANYNEED DLIDIDSLLD DDTFMSLAFE
0101: CYYAHGEDNE NFQRRCYWML EQDLMHIVFV HYLEVKGNRM STSGTKENHS NSLSGTGSVN VDSTATRSSI LSPLCEDADS GDSRQASSSL QQNPEPQTVV
0201: PQIMHHQNAS TINSYNTTSV LGNRDGWTSA HGNRVKGSNS QRSGDVPAWD ASFENSLARY QNLPYNAPLT QTQPSTFGLI PMEGKTEKGS LLTSEHLRNP
0301: LQSQVNWQTP VQESVPLQKW PMDSHSGMTD ATDLALFGQG AHENFGTFSS LLGSQDQQSS SFQAPFTNNE AAYIPKLGPE DLIYEASANQ TLPLRKALLK
0401: KEDSLKKVDS FSRWVSKELG EMEDLQMQSS SGGIAWTSVE CENAAAGSSL SPSLSEDQRF TMIDFWPKWT QTDSEVEVMV IGTFLLSPQE VTSYSWSCMF
0501: GEVEVPADIL VDGVLCCHAP PHEVGRVPFY ITCSDRFSCS EVREFDFLPG STRKLNATDI YGANTIETSL HLRFENLLAL RCSVQEHHIF ENVGEKRRKI
0601: SKIMLLKDEK EPPLPGTIEK DLTELEAKER LIREEFEDKL YLWLIHKVTE EGKGPNILDE DGQGVLHLAA ALGYDWAIKP ILAAGVSINF RDANGWSALH
0701: WAAFSGREDT VAVLVSLGAD AGALADPSPE HPLGKTAADL AYGNGHRGIS GFLAESSLTS YLEKLTVDAK ENSSADSSGA KAVLTVAERT ATPMSYGDVP
0801: ETLSMKDSLT AVLNATQAAD RLHQVFRMQS FQRKQLSELG GDNKFDISDE LAVSFAAAKT KKSGHSSGAV HAAAVQIQKK YRGWKKRKEF LLIRQRIVKI
0901: QAHVRGHQVR KQYRAIIWSV GLLEKIILRW RRKGSGLRGF KRDTISKPTE PVCPAPQEDD YDFLKEGRKQ TEERLQKALT RVKSMAQYPE ARAQYRRLLT
1001: VVEGFRENEA SSSSALKNNT EEAANYNEED DLIDIDSLLD DDTFMSLAFE
Arabidopsis Description
CAMTA2Calmodulin-binding transcription activator 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPP4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.