Factsheet for Bra038534.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13771	Canola	cytosol, nucleus, plastid	95.27	95.89
CDX76935	Canola	nucleus	93.44	91.76
Bra030248.1-P	Field mustard	nucleus	90.0	81.18
AT2G22300.1	Thale cress	cytosol	86.13	77.62
GSMUA_AchrUn_...	Banana	nucleus	13.23	53.71
Solyc04g056270.2.1	Tomato	nucleus	53.23	48.48
KRH43177	Soybean	nucleus	53.33	45.01
GSMUA_Achr6P10390_001	Banana	nucleus	51.4	44.88
TraesCS5B01G521100.2	Wheat	cytosol	42.8	44.67
KRH59333	Soybean	nucleus	53.01	43.94
Zm00001d028007_P004	Maize	nucleus	47.96	43.51
OQU91909	Sorghum	cytosol	47.74	43.44
Os10t0375600-01	Rice	nucleus	47.53	43.21
Os03t0191000-01	Rice	nucleus	47.74	43.15
OQU93088	Sorghum	mitochondrion	45.59	42.66
Zm00001d014286_P002	Maize	nucleus	47.42	42.53
GSMUA_AchrUn_...	Banana	cytosol	41.72	42.31
Bra037769.1-P	Field mustard	cytosol	46.67	42.22
Bra009382.1-P	Field mustard	nucleus	45.48	42.01
HORVU4Hr1G078620.1	Barley	cytosol	47.63	41.79
TraesCS4B01G306300.4	Wheat	cytosol	47.74	41.61
TraesCS4D01G304500.3	Wheat	cytosol	47.63	41.56
TraesCS4A01G407100.1	Wheat	cytosol	47.53	41.46
Zm00001d030518_P005	Maize	cytosol	48.17	40.99
VIT_07s0141g00250.t01	Wine grape	nucleus	57.85	39.76
Bra022188.1-P	Field mustard	cytosol	28.92	31.65
Bra004096.1-P	Field mustard	nucleus	31.18	29.8
Bra004217.1-P	Field mustard	nucleus	31.51	29.39
Bra034007.1-P	Field mustard	nucleus	31.83	29.25
Bra038040.1-P	Field mustard	nucleus	27.96	28.29
Bra004218.1-P	Field mustard	nucleus	0.11	0.34

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra038534	EnsemblPlants:Bra038534.1	EnsemblPlants:Bra038534.1-P	InterPro:CG-1_dom	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783
InterPro:IPR020683	InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:M4FBR8
InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF03859	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297
PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF12	SMART:SM00015	SMART:SM01076	SUPFAM:SSF48403
SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI0002541F5A	SEG:seg	:	:

Description

AT2G22300 (E=4e-266) CAMTA3, SR1 | SR1 (SIGNAL RESPONSIVE 1); calmodulin binding / transcription regulator

Coordinates

chrA09:-:5148382..5152757

Molecular Weight (calculated)

104166.0 Da

IEP (calculated)

5.500

GRAVY (calculated)

-0.540

Length

930 amino acids

Sequence
(BLAST)

001: MAEARRFSPN NELDVGHILS EARNRWLRPP EICEILQNYQ KFQISSEPPT TPASGSVFLF DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKAGSVDVLH
101: CYYAHGHDNE NFQRRSYWML QEELSHIVFV HYLEVKGSRI STSYNRMQRT AEDSAQFSHE TGEVFTSERD GYASGSINQY DHNNHPQATD SANVNGAHTP
201: ELEDAESAYN QQGSSIVYSH QQPPSTGFDP LYQMSLTPRT INGPGVTNGL RNKKSIDSQT WEEILGNCGS GAEGLLPLQP NSEHEVLDQI LQDSSFTMQA
301: PYLSTKKQHL LDGALGEEGL KKVDSFSRWM SKELGDVCVI ADANESFTHS SSTAYLDGYV MSPSLSKEQL FSIIDFAPNW TYVGCEVNVL VTGKFLKTPE
401: EAEREEWCCM FGQTEAPADV IADGILQCVA PMREAGRVPF YITCSNRLAC SEVREFEYKV LESQAFGRET DDSTESLEAR FVKLLCSKSD SPSSNGSDMS
501: QVSEKISLLL FENDDQLDQM LMNEISQESM KEKLLQEALK ESLHSWLLQK IAEGGKGPNV LDEGGQGILH FAAALGYNWA LEPTVVAGVS VDFRDVTGWT
601: ALHWAAFFGR ELVIGSLIAL GASPGTLTDP NPDFPSGSTP SDLAYANGFK GIAGYLSEYA LTAHVSLLSL NESNAETSES TTPSPSSSSL TDSLTAVRNA
701: TQAAARIHQV FRAQSFQKKQ MKEFGVSEER ALSMLAPKTH KQGRAHSDDS VQAAAIRIQN KFRGYKGRKD YLITRQRIIR IQAHVRGYQV RKNYRKIIWS
801: VGILEKVILR WRRKGAGLRG FKSDALVDKM QDGTGREEDD DFFKQGRKQT EERLQKALAR VKSMAQYPEA RDQYRRLLNV VNDIQESKVE KALESSEEAT
901: CFDDDLIDIE ALLGDDDTLM LPMSSTLWNT

Best Arabidopsis Sequence Match ( AT2G22300.2 )
(BLAST)

0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS

Arabidopsis Description

CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.