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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 2
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g056270.2.1 Tomato nucleus 48.26 63.96
KRH43177 Soybean nucleus 47.6 58.44
Bra038534.1-P Field mustard nucleus 39.76 57.85
CDY13771 Canola cytosol, nucleus, plastid 39.32 57.58
KRH59333 Soybean nucleus 47.38 57.13
CDX76935 Canola nucleus 39.47 56.39
CDY25585 Canola nucleus 40.65 55.56
AT2G22300.1 Thale cress cytosol 42.28 55.43
CDX89451 Canola nucleus 41.69 54.86
Bra030248.1-P Field mustard nucleus 41.61 54.61
GSMUA_AchrUn_... Banana nucleus 9.09 53.71
GSMUA_Achr6P10390_001 Banana nucleus 41.98 53.33
GSMUA_AchrUn_... Banana cytosol 36.07 53.22
OQU93088 Sorghum mitochondrion 37.32 50.8
OQU91909 Sorghum cytosol 37.84 50.1
TraesCS5B01G521100.2 Wheat cytosol 32.96 50.06
Os03t0191000-01 Rice nucleus 37.92 49.85
Zm00001d028007_P004 Maize nucleus 37.69 49.76
Os10t0375600-01 Rice nucleus 37.62 49.76
Zm00001d014286_P002 Maize nucleus 37.4 48.79
HORVU4Hr1G078620.1 Barley cytosol 37.92 48.4
TraesCS4D01G304500.3 Wheat cytosol 37.84 48.03
TraesCS4B01G306300.4 Wheat cytosol 37.69 47.8
TraesCS4A01G407100.1 Wheat cytosol 37.62 47.75
Zm00001d030518_P005 Maize cytosol 37.47 46.39
VIT_14s0036g00610.t01 Wine grape plastid 4.51 41.22
VIT_05s0020g00630.t01 Wine grape nucleus 30.67 40.77
VIT_01s0010g03850.t01 Wine grape nucleus 25.28 35.33
VIT_05s0077g01240.t01 Wine grape cytosol 22.17 32.36
VIT_00s0805g00010.t01 Wine grape cytosol, nucleus, plastid 1.4 31.67
Protein Annotations
Gene3D:1.20.5.190Gene3D:1.25.40.20MapMan:15.5.26Gene3D:2.60.40.10InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sfProteinID:CCB59087ProteinID:CCB59087.1InterPro:CG-1_domncoils:CoilUniProt:F6HWM2
EMBL:FN596274GO:GO:0000166GO:GO:0000398GO:GO:0000956GO:GO:0001077GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0003723GO:GO:0003824GO:GO:0003854
GO:GO:0004672GO:GO:0004788GO:GO:0005488GO:GO:0005515GO:GO:0005516GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259
GO:GO:0006298GO:GO:0006355GO:GO:0006366GO:GO:0006464GO:GO:0006468GO:GO:0006629
GO:GO:0006694GO:GO:0006772GO:GO:0006950GO:GO:0007275GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009058GO:GO:0009229GO:GO:0009409GO:GO:0009605GO:GO:0009607
GO:GO:0009628GO:GO:0009987GO:GO:0010150GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016616GO:GO:0016740GO:GO:0019538GO:GO:0030170GO:GO:0030529
GO:GO:0030975GO:GO:0030983GO:GO:0042742GO:GO:0043565GO:GO:0045944GO:GO:0050832
GO:GO:0055114GO:GO:0070417GO:GO:1900367InterPro:IPR000048InterPro:IPR002110InterPro:IPR005559
InterPro:IPR013783InterPro:IPR020683InterPro:IPR036770InterPro:IPT_domInterPro:IQ_motif_EF-hand-BSInterPro:Ig-like_fold
InterPro:Ig_E-setInterPro:P-loop_NTPasePFAM:PF00612PFAM:PF01833PFAM:PF03859PFAM:PF12796
PFscan:PS50088PFscan:PS50096PFscan:PS50297PFscan:PS51437PANTHER:PTHR23335PANTHER:PTHR23335:SF12
SMART:SM00015SMART:SM00248SMART:SM01076SUPFAM:SSF48403SUPFAM:SSF52540SUPFAM:SSF81296
UniParc:UPI000210A48CArrayExpress:VIT_07s0141g00250EnsemblPlantsGene:VIT_07s0141g00250EnsemblPlants:VIT_07s0141g00250.t01SEG:seg:
Description
No Description!
Coordinates
chr7_random:-:154717..170273
Molecular Weight (calculated)
152739.0 Da
IEP (calculated)
6.731
GRAVY (calculated)
-0.536
Length
1353 amino acids
Sequence
(BLAST)
0001: MAVEIGCRVG QLPAVYLGLP LGVSNKAISV WDGVEEKVRR RLALWKRQYI SKGGRITLIK STLASMPLYK MSLFRMPKSV ARRLEKLQRD FLWEGANGGK
0101: KAHLVKWEVV CADKEKGGLG LRKLACLNKA LLGKWIWRFA RAKEDIWKKV LEAKYGQEDF GWRTRKANGV FGVGVWKEIL KEFAWCWENM VFKVGKGNKI
0201: RFWIDPWCGN NVPSQSFPNL FSMAAQRNVT VEEMWDQNFG QGGWNLRFLR AFNDWELDMV GNLLVEFREH RVTLEEHSVI WKEGGDGLFR VKRAYSVLAS
0301: GSLFLFDRKV LRYFRKDGHN WRKKKDGKTV KEAHERLKAG SIDVLHCYYA HGEDNENFQR RSYWMLEEEL SHIVLVHYRE VKGNRTSFNR IKETEGALIN
0401: SQETEEVVPN SETDCSVSSS FPMNSYQMAS QTTDTTSLNS AQASEYEDAE SAYNHQASSR LHSFLEPVME KGDALTAPYY PAPFSNDYQG KLDIPGADFT
0501: SLAQESSSKD SNSVGISYEL PKNLDFPSWE DVLENCNAGV QSMPSQTPFS STRADTMGII PKQENEILMQ LLTDSFSRKQ EFGSDPQGQD EWQTSEGYSA
0601: HLSKWPGDQK LHSDSAYGLS TRFDIQEANC VDLLNSLEPG HAYPDGQKGH PLQNDFQIQL LNVDHGCYQK SDSERNMITE GKANYSSALK QPLLDSSLTE
0701: EGLKKVDSFN RWMSKELGDV NESHMQSRLS SSAAYWDTVE SENGVDESSI SPQGHLDTYM LGPSLSQDQL FSIIDFSPNW AYAGSEVKVL IMGKFLKGQQ
0801: DAEKCKWSCM FGEVEVPAEV ISDGVLRCHT PIHKAERVPF YVTCSNRLAC SEVREFEYRV NHIRDVDTAD VSSGSTSEIL LHMRFVKLLS LAPSSNSGLS
0901: NEGDRFPLNS KINSLMEEDN DEWEQMLMLT SEEFSPEKAK EQLLQKLLKE KLHVWLLQKA AEGGKGPNVL DEDGQGVLHF AAALGYDWAI PPTTAAGVSV
1001: NFRDVNGWTA LHWAAFCGRE RTVPFLISQG AAPGALTDPT PKYPAGRTPA DLASSNGHKG IAGYLAESAL SAHLQSLHLK ETKEADAAEI SGIKAVQTIS
1101: ERSPTPISTG DLPLKDSLAA VCNATQAAAR IHQVFRVQSF QKKQQKEYDD GKFGMSDEHA LSLIAVKSRL GQHDEPVHAA ATRIQNKFRS WKGRKDFLII
1201: RQRIVKIQAH VRGHQVRKNY RKIIWSVGIL EKVILRWRRK GSGLRGFKPE THTEGTSMRD ISSKEDDYDF LKEGRKQTEE RLQKALARVK SMVQYPEARD
1301: QYRRLLNVVT EIQETKQVVY DRALNSSEEA ADFDDLIDLQ ALLDDDTFMP TAS
Best Arabidopsis Sequence Match ( AT2G22300.2 )
(BLAST)
0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
Arabidopsis Description
CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.