Factsheet for GSMUA_AchrUn_randomP23670_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P10390_001	Banana	nucleus	75.57	65.07
CDX92455	Canola	cytosol	34.02	49.21
OQU93088	Sorghum	mitochondrion	51.15	47.18
OQU91909	Sorghum	cytosol	50.16	45.01
Zm00001d028007_P004	Maize	nucleus	50.27	44.98
Os10t0375600-01	Rice	nucleus	49.84	44.67
Os03t0191000-01	Rice	nucleus	49.84	44.41
Zm00001d014286_P002	Maize	nucleus	49.4	43.68
HORVU4Hr1G078620.1	Barley	cytosol	50.49	43.68
TraesCS4D01G304500.3	Wheat	cytosol	50.6	43.53
TraesCS4B01G306300.4	Wheat	cytosol	50.6	43.49
TraesCS5B01G521100.2	Wheat	cytosol	42.2	43.43
TraesCS4A01G407100.1	Wheat	cytosol	50.38	43.34
Solyc04g056270.2.1	Tomato	nucleus	46.67	41.92
Bra038534.1-P	Field mustard	nucleus	42.31	41.72
Zm00001d030518_P005	Maize	cytosol	49.73	41.72
CDY13771	Canola	cytosol, nucleus, plastid	41.33	41.02
KRH43177	Soybean	nucleus	48.96	40.74
CDX76935	Canola	nucleus	41.44	40.13
KRH59333	Soybean	nucleus	49.07	40.11
AT2G22300.1	Thale cress	cytosol	44.6	39.63
CDX89451	Canola	nucleus	44.06	39.3
Bra030248.1-P	Field mustard	nucleus	44.06	39.19
CDY25585	Canola	nucleus	42.2	39.09
KRH42152	Soybean	nucleus	45.69	38.83
KRH10541	Soybean	nucleus	46.02	38.79
Solyc01g105230.2.1	Tomato	nucleus	43.95	38.75
KRH43898	Soybean	nucleus	45.37	38.48
KRH58270	Soybean	nucleus	45.58	38.42
CDX69907	Canola	nucleus	39.8	36.25
Bra009382.1-P	Field mustard	nucleus	39.8	36.25
CDY21580	Canola	cytosol, nucleus, plastid	39.37	36.14
CDX81217	Canola	nucleus	38.82	36.07
VIT_07s0141g00250.t01	Wine grape	nucleus	53.22	36.07
AT5G64220.2	Thale cress	nucleus	40.79	35.62
Bra037769.1-P	Field mustard	cytosol	39.48	35.21
CDY18719	Canola	cytosol	38.82	34.94
AT5G09410.3	Thale cress	cytosol	39.04	33.58
GSMUA_Achr3P08460_001	Banana	nucleus	35.44	33.2
GSMUA_Achr5P21190_001	Banana	cytosol	18.87	32.52
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	25.95	30.51
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	23.99	27.85
GSMUA_AchrUn_...	Banana	nucleus	6.43	25.43
GSMUA_Achr9P01330_001	Banana	nucleus	29.12	25.19
GSMUA_AchrUn_...	Banana	nucleus	6.11	24.45
GSMUA_Achr8P10490_001	Banana	cytosol	21.81	23.87
GSMUA_Achr1P21540_001	Banana	nucleus	6.11	23.05
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	25.74	20.87
GSMUA_Achr3P21310_001	Banana	nucleus	3.6	13.81
GSMUA_Achr5P21200_001	Banana	cytosol	0.22	1.36
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
GSMUA_Achr8P00680_001	Banana	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_AchrUn_randomG23670_001
EnsemblPlants:GSMUA_AchrUn_randomP23670_001	EnsemblPlants:GSMUA_AchrUn_randomT23670_001	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR013783	InterPro:IPR020683
InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	UniProt:M0UBS5
InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833	PFAM:PF12796	PFscan:PS50088	PFscan:PS50096
PFscan:PS50297	PANTHER:PTHR23335	PANTHER:PTHR23335:SF14	SMART:SM00015	SMART:SM00248	SUPFAM:SSF48403
SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI000296105F	SEG:seg	:	:

Description

Putative Calmodulin-binding transcription activator 3 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23670_001]

Coordinates

chrchrUn_random:+:115895109..115903352

Molecular Weight (calculated)

101767.0 Da

IEP (calculated)

4.952

GRAVY (calculated)

-0.414

Length

917 amino acids

Sequence
(BLAST)

001: MHIVLVHYLE VKGHKPSFSR NREVEDVPQD NQVDSPVSSN SITNHSQLPS QATDVESPIS LHTSEYEDAE SAKFDAADNY PTSSRYHPFV KMQQYDDGQM
101: TGVQFVDSYV PDPSIDSQCG FQEIHDAEPK SDFYSVTQED IGRVFNETGL GLTFIGSKTQ LDLASWEEVL EHCATSHQMP SFQSSAGITE VTTEEISSKQ
201: TSVHADLYAE NPGTRQDDSI ISDKFEWQLS SADTDSAIIS TINMENETSI DGSDKYTSLV KQPTLDLSRV QTEGLKKYDS FSRWMSKELG EVDESHTKSS
301: SGAYWSAVGS DGIVEDSSIS NHEPLDAYIM SLSLSQDQLF SIIDFSPNWV YAGLETKVLI IGTFLKTQDV ENCKWSCMFG EVEVPAEVVG DGILSCHAPP
401: HKSGRVPFYV TCSNRLACSE VREFEFRVSD PHCIENIDSC SNNTYEMLLH MRLDKLLSLG PLDSQSLDYR KKAHLGGKIS LIKMEAADDT LPKISQENGY
501: SADNAELLEM LLQEKLHIWL LHKSAKDDKG PNIWDEEGQG VLHLAAALGY DWAIEPTVTA GVNINFRDAH GWTALHWAAF CGRERTVGAL ITMGAAPGLL
601: TDPTPEFPSG RTPADLASAN GHKGIAGFLA ESSLTSHLSS LTLDPKGSDI ADVASLTGID DAEQRALAVA DGDMQAGLSL KDSLSAVRNA SQAAARIYQV
701: FRVQSFHRKK IESGGDKSAM SDERALSLLS IKSQKTGHSD MPMHAAAIRI QNKFRGWKGR KDFLIIMQRI VKIQAHVRGH QVRKRYKKFV WSVGIVEKVI
801: LRWRRKGSGL RGFRSEGVLE GTSMQCHLAK EDDYDFLQEG RKQTEARMQK ALARVKSMVQ YPEAREQYRR LLTVVTEFQE SKALQESIMD VSEDAADAHL
901: MVELEELLEG DTVMPTV

Best Arabidopsis Sequence Match ( AT2G22300.3 )
(BLAST)

001: MFDRKVLRYF RKDGHNWRKK KDGKTVKEAH ERLKAGSVDV LHCYYAHGQD NENFQRRSYW LLQEELSHIV FVHYLEVKGS RVSTSFNRMQ RTEDAARSPQ
101: ETGDALTSEH DGYASCSFNQ NDHSNHSQTT DSASVNGFHS PELEDAESAY NQHGSSTAYS HQELQQPATG GNLTGFDPYY QISLTPRDSY QKELRTIPVT
201: DSSIMVDKSK TINSPGVTNG LKNRKSIDSQ TWEEILGNCG SGVEALPLQP NSEHEVLDQI LESSFTMQDF ASLQESMVKS QNQELNSGLT SDRTVWFQGQ
301: DMELNAISNL ASNEKAPYLS TMKQHLLHGA LGEEGLKKMD SFNRWMSKEL GDVGVIADAN ESFTQSSSRT YWEEVESEDG SNGHNSRRDM DGYVMSPSLS
401: KEQLFSINDF SPSWAYVGCE VVVFVTGKFL KTREETEIGE WSCMFGQTEV PADVISNGIL QCVAPMHEAG RVPFYVTCSN RLACSEVREF EYKVAESQVF
501: DREADDESTI DILEARFVKL LCSKSENTSP VSGNDSDLSQ LSEKISLLLF ENDDQLDQML MNEISQENMK NNLLQEFLKE SLHSWLLQKI AEGGKGPSVL
601: DEGGQGVLHF AASLGYNWAL EPTIIAGVSV DFRDVNGWTA LHWAAFFGRE RIIGSLIALG AAPGTLTDPN PDFPSGSTPS DLAYANGHKG IAGYLSEYAL
701: RAHVSLLSLN DKNAETVEMA PSPSSSSLTD SLTAVRNATQ AAARIHQVFR AQSFQKKQLK EFGDKKLGMS EERALSMLAP KTHKSGRAHS DDSVQAAAIR
801: IQNKFRGYKG RKDYLITRQR IIKIQAHVRG YQFRKNYRKI IWSVGVLEKV ILRWRRKGAG LRGFKSEALV EKMQDGTEKE EDDDFFKQGR KQTEDRLQKA
901: LARVKSMVQY PEARDQYRRL LNVVNDIQES KVEKALENSE ATCFDDDDDL IDIEALLEDD DTLMLPMSSS LWTS

Arabidopsis Description

CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.