Factsheet for GSMUA_Achr8P00680_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
endoplasmic reticulum 1
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	51.8	70.59
GSMUA_Achr5P21200_001	Banana	cytosol	42.45	40.14
GSMUA_AchrUn_...	Banana	nucleus	48.92	29.69
GSMUA_Achr3P21310_001	Banana	nucleus	48.2	28.03
GSMUA_AchrUn_...	Banana	nucleus	45.32	27.16
GSMUA_Achr1P21540_001	Banana	nucleus	46.04	26.34
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	69.78	8.58
Solyc05g015650.2.1	Tomato	nucleus	56.12	8.34
VIT_01s0010g03850.t01	Wine grape	nucleus	56.12	8.06
Solyc12g035520.1.1	Tomato	nucleus	53.96	7.71
GSMUA_Achr9P01330_001	Banana	nucleus	53.24	6.98
Bra034007.1-P	Field mustard	nucleus	48.92	6.72
AT1G67310.1	Thale cress	cytosol	48.92	6.69
CDY07431	Canola	nucleus	46.04	6.63
Bra004096.1-P	Field mustard	nucleus	46.04	6.58
CDY28897	Canola	nucleus	46.04	6.56
CDY12637	Canola	nucleus	48.2	6.48
GSMUA_Achr8P10490_001	Banana	cytosol	38.85	6.44
GSMUA_Achr3P08460_001	Banana	nucleus	45.32	6.44
CDY51184	Canola	nucleus	46.76	6.34
Bra004217.1-P	Field mustard	nucleus	45.32	6.32
GSMUA_Achr6P10390_001	Banana	nucleus	47.48	6.2
CDY01799	Canola	nucleus	45.32	6.15
CDX96099	Canola	nucleus	44.6	4.93
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	23.02	4.05
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	3.6	0.64
KRH15615	Soybean	cytosol	1.44	0.63
GSMUA_Achr5P21190_001	Banana	cytosol	0.0	0.0
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
PGSC0003DMT400084738	Potato	cytosol	0.0	0.0
Bra004218.1-P	Field mustard	nucleus	0.0	0.0
VIT_14s0036g00610.t01	Wine grape	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr8P00680_001	EnsemblPlants:GSMUA_Achr8T00680_001	EnsemblPlantsGene:GSMUA_Achr8G00680_001	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:CG-1_dom
InterPro:IPR005559	PANTHER:PTHR23335	PANTHER:PTHR23335:SF1	PFAM:PF03859	PFscan:PS51437	SMART:SM01076
UniParc:UPI0002952490	UniProt:M0TLH0	MapMan:35.1	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G00680_001]

Coordinates

chr8:+:620231..622078

Molecular Weight (calculated)

16605.2 Da

IEP (calculated)

10.824

GRAVY (calculated)

-0.645

Length

139 amino acids

Sequence
(BLAST)

001: MLMRWTVNWG RILRLLKCIT FVFSRVVTGF DINKLSEEAQ SRWLKPVEVL YILQKHESFK ITQKPPQKPP SGSLFLFNRR VLRYFRNDGY SWQKKKNGKT
101: AREGHERLKV GNSEAINCYY ARGEKNSCIQ RRSYWMLDP

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.