Factsheet for GSMUA_AchrUn_randomP02100_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	70.31	69.4
GSMUA_Achr1P21540_001	Banana	nucleus	72.05	67.9
GSMUA_AchrUn_...	Banana	cytosol	24.45	54.9
GSMUA_Achr8P00680_001	Banana	mitochondrion	29.69	48.92
GSMUA_Achr3P21310_001	Banana	nucleus	46.72	44.77
GSMUA_Achr5P21200_001	Banana	cytosol	28.38	44.22
GSMUA_Achr6P10390_001	Banana	nucleus	71.62	15.4
Solyc04g056270.2.1	Tomato	nucleus	60.26	13.52
CDY13771	Canola	cytosol, nucleus, plastid	53.71	13.31
Bra038534.1-P	Field mustard	nucleus	53.71	13.23
CDX76935	Canola	nucleus	54.59	13.2
CDY21580	Canola	cytosol, nucleus, plastid	55.02	12.61
CDX81217	Canola	nucleus	54.15	12.56
CDY25585	Canola	nucleus	54.15	12.53
Bra009382.1-P	Field mustard	nucleus	55.02	12.51
CDX69907	Canola	nucleus	55.02	12.51
KRH42152	Soybean	nucleus	58.08	12.33
Solyc01g105230.2.1	Tomato	nucleus	55.9	12.31
AT5G64220.2	Thale cress	nucleus	56.33	12.29
KRH10541	Soybean	nucleus	58.08	12.22
KRH43177	Soybean	nucleus	58.52	12.16
KRH43898	Soybean	nucleus	57.21	12.12
KRH58270	Soybean	nucleus	57.21	12.04
Bra030248.1-P	Field mustard	nucleus	54.15	12.03
CDX89451	Canola	nucleus	53.71	11.96
KRH59333	Soybean	nucleus	58.52	11.94
GSMUA_Achr3P08460_001	Banana	nucleus	50.66	11.85
AT2G22300.1	Thale cress	cytosol	53.28	11.82
CDY18719	Canola	cytosol	51.53	11.58
Bra037769.1-P	Field mustard	cytosol	51.53	11.48
AT5G09410.3	Thale cress	cytosol	51.97	11.16
VIT_07s0141g00250.t01	Wine grape	nucleus	53.71	9.09
GSMUA_Achr9P01330_001	Banana	nucleus	39.74	8.58
GSMUA_Achr8P10490_001	Banana	cytosol	31.0	8.47
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	38.43	7.78
GSMUA_AchrUn_...	Banana	cytosol	24.45	6.11
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	17.47	5.06
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	8.73	2.56
GSMUA_Achr5P21190_001	Banana	cytosol	0.44	0.19
CDX92455	Canola	cytosol	0.44	0.16

Protein Annotations

MapMan:35.1	InterPro:CG-1_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	EnsemblPlantsGene:GSMUA_AchrUn_randomG02100_001	EnsemblPlants:GSMUA_AchrUn_randomP02100_001
EnsemblPlants:GSMUA_AchrUn_randomT02100_001	InterPro:IPR005559	UniProt:M0U5M2	PFAM:PF03859	PFscan:PS51437	PANTHER:PTHR23335
PANTHER:PTHR23335:SF12	SMART:SM01076	UniParc:UPI00029689FE	:	:	:

Description

calmodulin-binding transcription activator, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG02100_001]

Coordinates

chrchrUn_random:-:9550003..9558646

Molecular Weight (calculated)

26625.1 Da

IEP (calculated)

6.653

GRAVY (calculated)

-0.952

Length

229 amino acids

Sequence
(BLAST)

001: MAGAGRSGSI PPLDIEQILV EAQDRWLRPA EICEILQNHR KFHIAPEPPN RPPSGSLFLF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKVGSVDMLH
101: CYYAHGEENE KFQRRSYWML DEELMHIVLV HYREVKRGRT SERKRGVLHE DKPSLSYTKD VEEVVQVTQM DNLFTSNSAT SQGQPPSQTM DTDSPSSAHT
201: SEYEDAESAD IYQTSSRYHP VAEMWQHDD

Best Arabidopsis Sequence Match ( AT2G22300.2 )
(BLAST)

0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS

Arabidopsis Description

CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.