Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 12.31 | 55.9 |
| CDX92455 | Canola | cytosol | 32.21 | 52.84 |
| CDX81217 | Canola | nucleus | 47.31 | 49.85 |
| KRH10541 | Soybean | nucleus | 51.83 | 49.54 |
| KRH42152 | Soybean | nucleus | 51.06 | 49.21 |
| KRH58270 | Soybean | nucleus | 51.25 | 48.99 |
| AT5G64220.2 | Thale cress | nucleus | 49.42 | 48.95 |
| KRH43898 | Soybean | nucleus | 50.77 | 48.84 |
| Solyc01g060170.2.1 | Tomato | nucleus | 7.4 | 48.43 |
| CDX69907 | Canola | nucleus | 46.54 | 48.06 |
| Bra037769.1-P | Field mustard | cytosol | 47.5 | 48.05 |
| Bra009382.1-P | Field mustard | nucleus | 46.44 | 47.96 |
| Solyc04g056270.2.1 | Tomato | nucleus | 47.02 | 47.89 |
| CDY18719 | Canola | cytosol | 46.83 | 47.79 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 45.87 | 47.75 |
| GSMUA_Achr6P10390_001 | Banana | nucleus | 48.56 | 47.42 |
| TraesCS5B01G521100.2 | Wheat | cytosol | 39.62 | 46.24 |
| Zm00001d028007_P004 | Maize | nucleus | 45.0 | 45.66 |
| Os10t0375600-01 | Rice | nucleus | 44.62 | 45.36 |
| AT5G09410.3 | Thale cress | cytosol | 46.06 | 44.93 |
| OQU91909 | Sorghum | cytosol | 44.13 | 44.91 |
| Os03t0191000-01 | Rice | nucleus | 44.13 | 44.61 |
| Zm00001d014286_P002 | Maize | nucleus | 44.23 | 44.36 |
| HORVU4Hr1G078620.1 | Barley | cytosol | 45.19 | 44.34 |
| OQU93088 | Sorghum | mitochondrion | 42.31 | 44.27 |
| TraesCS4D01G304500.3 | Wheat | cytosol | 45.1 | 44.0 |
| TraesCS4B01G306300.4 | Wheat | cytosol | 45.1 | 43.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.75 | 43.95 |
| TraesCS4A01G407100.1 | Wheat | cytosol | 44.71 | 43.62 |
| Zm00001d030518_P005 | Maize | cytosol | 43.85 | 41.72 |
| Solyc01g057270.2.1 | Tomato | nucleus | 32.21 | 35.01 |
| Solyc05g015650.2.1 | Tomato | nucleus | 30.58 | 34.01 |
| Solyc12g035520.1.1 | Tomato | nucleus | 29.62 | 31.65 |
| Solyc01g060140.2.1 | Tomato | nucleus | 19.9 | 31.03 |
| Solyc12g099340.1.1 | Tomato | nucleus | 27.21 | 30.93 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:CG-1_dom | ncoils:Coil | GO:GO:0001077 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006366 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045944 | InterPro:IPR000048 | InterPro:IPR002110 |
| InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IPT_dom | InterPro:IQ_motif_EF-hand-BS |
| InterPro:Ig-like_fold | InterPro:Ig_E-set | UniProt:K4B293 | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF01833 |
| PFAM:PF03859 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 | PANTHER:PTHR23335 |
| PANTHER:PTHR23335:SF12 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 | SUPFAM:SSF52540 |
| SUPFAM:SSF81296 | EnsemblPlantsGene:Solyc01g105230.2 | EnsemblPlants:Solyc01g105230.2.1 | UniParc:UPI0002768D8F | SEG:seg | : |
Description
No Description!
Coordinates
chr1:+:93464755..93475576
Molecular Weight (calculated)
117424.0 Da
IEP (calculated)
5.497
GRAVY (calculated)
-0.509
Length
1040 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDCGSDPPG FRLDITQILS EVQHRWLRPA EICEILRNHR KFHLTPEAPF RPVSGSVFLF DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH
0101: CYYAHGEEDD NFQRRSYWML EQDLMHIVFV HYLEVKGNKV NVSSIRSTKS VHPNYLNDCS LSDSFSTRHK KLTSANADST SLASTLTEAH EEAESEDSHQ
0201: ACSRFHSYPD RASGMDSHLV ENRDTISSSY GSPQSSVEYT PLPGIDGSGK CDLGNFASGP QRTIDLGSWE PLPQHCLNGE MVCQDDFKNN LSVHGNWQFH
0301: GQNVNQDLIA DSSYDLGLPS DLLTVRGPSY LYSNEKEEQL AQLNLQFLKS LVEVQGDINQ ENSMDMLELG DYSTIKQPHL SSVKVEEGLK KVDSFSRWVA
0401: KELEDVEELH MQPSNQMSWN VIDTEEEGSC LPSQLHVDSD SLNLSLSQEQ VFSIIDFSPN WAYSNLETKV LITGRFLKSE GELVEYKWSC MFGEVEVPAE
0501: VLADGVLRCH APPHKPGVLP FYVTCSNRLA CSEVREFEYR FGPYQEVGAA DVSMTEKHLL ERIENLLSLG PVSSCRSSDS MEDSEEKRST VNKIISMMEE
0601: ENQPIIERAS YGDTSQCRVK EDLYFERKLK QNFYAWLVHQ VTDDGRGRTL LDGEGQGVLH LVAALGYDWA FKPILASGVS VDFRDMNGWT ALHWAAFYGR
0701: EKTVVSLVSL GASPGALTDP SAEFPLGRTP ADLASANGHK GISGFVAESS LTTHLSKLTV TDAKEELDSE VCEAKVGETV TERVAVSTTE NDVPDVLSLK
0801: DSLAAIRNAT QAAARIHQIF RVQSFQRKQI IEHCDNELSS DENAIAIVAS RACKLGQNNG IAHAAAIQIQ KKFRGWNKRK EFLLIRQKIV KIQAHIRGHQ
0901: VRKKYKPIIW SVGILEKVIL RWRRKRSGLR GFRSEAVMSK PSTQEDSLPE DDYDFLKEGR KQTEVRMQKA LARVKSMTQY PEGRAQYRRL LTAAEGLREV
1001: KQDGPIQIPE IPEDTIYPEE ELFDVDSLLD DDTFMSIAFE
0101: CYYAHGEEDD NFQRRSYWML EQDLMHIVFV HYLEVKGNKV NVSSIRSTKS VHPNYLNDCS LSDSFSTRHK KLTSANADST SLASTLTEAH EEAESEDSHQ
0201: ACSRFHSYPD RASGMDSHLV ENRDTISSSY GSPQSSVEYT PLPGIDGSGK CDLGNFASGP QRTIDLGSWE PLPQHCLNGE MVCQDDFKNN LSVHGNWQFH
0301: GQNVNQDLIA DSSYDLGLPS DLLTVRGPSY LYSNEKEEQL AQLNLQFLKS LVEVQGDINQ ENSMDMLELG DYSTIKQPHL SSVKVEEGLK KVDSFSRWVA
0401: KELEDVEELH MQPSNQMSWN VIDTEEEGSC LPSQLHVDSD SLNLSLSQEQ VFSIIDFSPN WAYSNLETKV LITGRFLKSE GELVEYKWSC MFGEVEVPAE
0501: VLADGVLRCH APPHKPGVLP FYVTCSNRLA CSEVREFEYR FGPYQEVGAA DVSMTEKHLL ERIENLLSLG PVSSCRSSDS MEDSEEKRST VNKIISMMEE
0601: ENQPIIERAS YGDTSQCRVK EDLYFERKLK QNFYAWLVHQ VTDDGRGRTL LDGEGQGVLH LVAALGYDWA FKPILASGVS VDFRDMNGWT ALHWAAFYGR
0701: EKTVVSLVSL GASPGALTDP SAEFPLGRTP ADLASANGHK GISGFVAESS LTTHLSKLTV TDAKEELDSE VCEAKVGETV TERVAVSTTE NDVPDVLSLK
0801: DSLAAIRNAT QAAARIHQIF RVQSFQRKQI IEHCDNELSS DENAIAIVAS RACKLGQNNG IAHAAAIQIQ KKFRGWNKRK EFLLIRQKIV KIQAHIRGHQ
0901: VRKKYKPIIW SVGILEKVIL RWRRKRSGLR GFRSEAVMSK PSTQEDSLPE DDYDFLKEGR KQTEVRMQKA LARVKSMTQY PEGRAQYRRL LTAAEGLREV
1001: KQDGPIQIPE IPEDTIYPEE ELFDVDSLLD DDTFMSIAFE
0001: MADRGSFGFA PRLDIKQLLS EAQHRWLRPA EICEILRNHQ KFHIASEPPN RPPSGSLFLF DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH
0101: CYYAHGEDNE NFQRRCYWML EQDLMHIVFV HYLEVKGNRM STSGTKENHS NSLSGTGSVN VDSTATRSSI LSPLCEDADS GDSRQASSSL QQNPEPQTVV
0201: PQIMHHQNAS TINSYNTTSV LGNRDGWTSA HGNRVKGSNS QRSGDVPAWD ASFENSLARY QNLPYNAPLT QTQPSTFGLI PMEGKTEKGS LLTSEHLRNP
0301: LQSQVNWQTP VQESVPLQKW PMDSHSGMTD ATDLALFGQG AHENFGTFSS LLGSQDQQSS SFQAPFTNNE AAYIPKLGPE DLIYEASANQ TLPLRKALLK
0401: KEDSLKKVDS FSRWVSKELG EMEDLQMQSS SGGIAWTSVE CENAAAGSSL SPSLSEDQRF TMIDFWPKWT QTDSEVEVMV IGTFLLSPQE VTSYSWSCMF
0501: GEVEVPADIL VDGVLCCHAP PHEVGRVPFY ITCSDRFSCS EVREFDFLPG STRKLNATDI YGANTIETSL HLRFENLLAL RCSVQEHHIF ENVGEKRRKI
0601: SKIMLLKDEK EPPLPGTIEK DLTELEAKER LIREEFEDKL YLWLIHKVTE EGKGPNILDE DGQGVLHLAA ALGYDWAIKP ILAAGVSINF RDANGWSALH
0701: WAAFSGREDT VAVLVSLGAD AGALADPSPE HPLGKTAADL AYGNGHRGIS GFLAESSLTS YLEKLTVDAK ENSSADSSGA KAVLTVAERT ATPMSYGDVP
0801: ETLSMKDSLT AVLNATQAAD RLHQVFRMQS FQRKQLSELG GDNKFDISDE LAVSFAAAKT KKSGHSSGAV HAAAVQIQKK YRGWKKRKEF LLIRQRIVKI
0901: QAHVRGHQVR KQYRAIIWSV GLLEKIILRW RRKGSGLRGF KRDTISKPTE PVCPAPQEDD YDFLKEGRKQ TEERLQKALT RVKSMAQYPE ARAQYRRLLT
1001: VVEGFRENEA SSSSALKNNT EEAANYNEED DLIDIDSLLD DDTFMSLAFE
0101: CYYAHGEDNE NFQRRCYWML EQDLMHIVFV HYLEVKGNRM STSGTKENHS NSLSGTGSVN VDSTATRSSI LSPLCEDADS GDSRQASSSL QQNPEPQTVV
0201: PQIMHHQNAS TINSYNTTSV LGNRDGWTSA HGNRVKGSNS QRSGDVPAWD ASFENSLARY QNLPYNAPLT QTQPSTFGLI PMEGKTEKGS LLTSEHLRNP
0301: LQSQVNWQTP VQESVPLQKW PMDSHSGMTD ATDLALFGQG AHENFGTFSS LLGSQDQQSS SFQAPFTNNE AAYIPKLGPE DLIYEASANQ TLPLRKALLK
0401: KEDSLKKVDS FSRWVSKELG EMEDLQMQSS SGGIAWTSVE CENAAAGSSL SPSLSEDQRF TMIDFWPKWT QTDSEVEVMV IGTFLLSPQE VTSYSWSCMF
0501: GEVEVPADIL VDGVLCCHAP PHEVGRVPFY ITCSDRFSCS EVREFDFLPG STRKLNATDI YGANTIETSL HLRFENLLAL RCSVQEHHIF ENVGEKRRKI
0601: SKIMLLKDEK EPPLPGTIEK DLTELEAKER LIREEFEDKL YLWLIHKVTE EGKGPNILDE DGQGVLHLAA ALGYDWAIKP ILAAGVSINF RDANGWSALH
0701: WAAFSGREDT VAVLVSLGAD AGALADPSPE HPLGKTAADL AYGNGHRGIS GFLAESSLTS YLEKLTVDAK ENSSADSSGA KAVLTVAERT ATPMSYGDVP
0801: ETLSMKDSLT AVLNATQAAD RLHQVFRMQS FQRKQLSELG GDNKFDISDE LAVSFAAAKT KKSGHSSGAV HAAAVQIQKK YRGWKKRKEF LLIRQRIVKI
0901: QAHVRGHQVR KQYRAIIWSV GLLEKIILRW RRKGSGLRGF KRDTISKPTE PVCPAPQEDD YDFLKEGRKQ TEERLQKALT RVKSMAQYPE ARAQYRRLLT
1001: VVEGFRENEA SSSSALKNNT EEAANYNEED DLIDIDSLLD DDTFMSLAFE
Arabidopsis Description
CAMTA2Calmodulin-binding transcription activator 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPP4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.