Factsheet for Os10t0375600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 2
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

nucleus: 19621931

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91909	Sorghum	cytosol	80.94	81.02
Zm00001d014286_P002	Maize	nucleus	78.59	77.53
Os03t0191000-01	Rice	nucleus	74.1	73.66
Zm00001d030518_P005	Maize	cytosol	78.69	73.65
Os03t0388500-01	Rice	cytosol, peroxisome	17.5	60.27
GSMUA_Achr6P10390_001	Banana	nucleus	56.3	54.08
Os07t0623100-01	Rice	cytosol	14.47	52.67
GSMUA_AchrUn_...	Banana	cytosol	44.67	49.84
Solyc04g056270.2.1	Tomato	nucleus	48.39	48.48
CDY13771	Canola	cytosol, nucleus, plastid	43.21	47.84
Bra038534.1-P	Field mustard	nucleus	43.21	47.53
KRH43177	Soybean	nucleus	50.64	47.01
CDX76935	Canola	nucleus	42.82	46.25
KRH59333	Soybean	nucleus	50.54	46.08
CDX92455	Canola	cytosol	28.54	46.06
AT2G22300.1	Thale cress	cytosol	45.36	44.96
CDX81217	Canola	nucleus	43.3	44.88
KRH42152	Soybean	nucleus	47.31	44.86
KRH58270	Soybean	nucleus	47.7	44.85
KRH10541	Soybean	nucleus	47.51	44.67
Solyc01g105230.2.1	Tomato	nucleus	45.36	44.62
KRH43898	Soybean	nucleus	47.02	44.5
CDY25585	Canola	nucleus	43.01	44.44
CDY21580	Canola	cytosol, nucleus, plastid	43.11	44.14
AT5G64220.2	Thale cress	nucleus	44.97	43.81
Bra030248.1-P	Field mustard	nucleus	43.99	43.65
CDX89451	Canola	nucleus	43.79	43.58
CDX69907	Canola	nucleus	42.62	43.3
Bra009382.1-P	Field mustard	nucleus	42.62	43.3
CDY18719	Canola	cytosol	42.91	43.08
Bra037769.1-P	Field mustard	cytosol	42.91	42.7
AT5G09410.3	Thale cress	cytosol	42.52	40.81
VIT_07s0141g00250.t01	Wine grape	nucleus	49.76	37.62
Os01t0923600-02	Rice	nucleus	25.9	30.18
Os04t0388500-01	Rice	nucleus	29.52	30.11
Os07t0490200-01	Rice	nucleus	25.81	28.48

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	EntrezGene:4348485	ProteinID:ABB47374.1
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:BAF26384.1	ProteinID:BAT10591.1	InterPro:CG-1_dom
ncoils:Coil	GO:GO:0001077	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006366	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	GO:GO:0045944	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783
InterPro:IPR020683	InterPro:IPR036770	InterPro:IPT_dom	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set
EnsemblPlantsGene:Os10g0375600	EnsemblPlants:Os10t0375600-01	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF01833	PFAM:PF03859
PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF7
UniProt:Q339A6	SMART:SM00015	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296
UniParc:UPI00005E1DAD	RefSeq:XP_015614397.1	SEG:seg	:	:	:

Description

Similar to ER66 protein (Fragment). (Os10t0375600-01)

Coordinates

chr10:+:11935626..11942860

Molecular Weight (calculated)

114129.0 Da

IEP (calculated)

6.070

GRAVY (calculated)

-0.530

Length

1023 amino acids

Sequence
(BLAST)

0001: MAAAADARRF AVVPQLDIAQ ILKEAQQRWL RPAEICEILK NYKSFRIAPE PPNRPQSGSL FLFDRKVLRY FRKDGHNWRK KKDGKTVKEA HERLKSGSID
0101: VLHCYYAHGE ENENFQRRTY WMLEEDFMHI VLVHYLETKG GKSRTRGNND MHQAAVMDSP LSQLPSQTID GESSLSGQFS EYEEAESDVY SGGTGYHSFT
0201: QMQQQQNGIG PVTDASMFSS RVSASSIGNY QGQHAMGHTT NFYSSSQHDS PLVLSDPNLE LANNGHESLW NGVMKPDEGT VQMTHLQPPV HPEQGMFTTE
0301: GQGVEYLTFD EVYSDGLSLK DIGAAGADVE PFWQLSSATA DISATENSVQ QNDGSLGAAI GFPFLKTQSS NLSDILKDSF KKSDSFTRWM SKELLDVEDS
0401: QIQSSSGAYW NTEEADSIIE ASSREPLDQF TVAPMVLQDQ LFSIVDFSPS WTYAGSKTKV LVTGRFLHAN EVTERCKWSC MFGEVEIQAE ISADGTLRCY
0501: SPPHKPGRVP FYVTCSNRLA CSEVREFEFR PSDSQYMDAP SPLGATNKVY FQIRLDNLLS LGPDVYQATI TNPSKEMIDL SKKISSLLAN NDEWSKLLKL
0601: ADDNEPLSHD QQDQYAENLI KEKLHVWLLH KVGDGGKGPS VLDDEGLGVL HLAAALGYDW AIRPTVTAGV NINFRDFHGW TALHWAAFCG RERTVVALIA
0701: LGAAPGALTD PHPNYPAEST PADLASANGH KGISGFLAES SLTSHLQALN LKEANMSEIS GLPGIGDVTE RNASQPAIGD SLGAVRNAAQ AAARIYQVFR
0801: VQSFQRKQAV QYEGDKGGIS DEHALSLLSM KPSKSGQLDP LHAAASRIQN KYRGWKGRKE FLLFRQRIVK IQAHVRGHQV RKHYRKIVWS VGIVEKVILR
0901: WRRRRAGLRG FRPTEGAIES SSGGTSSNLV KDKPAGDDYD FLQEGRKQTE ERLQKALARV KSMVQYPEAR DQYQRILNVV SKMQESQTVQ EKILDESTEM
1001: DEGDFMSEFK ELWDDDTPLP GYF

Best Arabidopsis Sequence Match ( AT2G22300.2 )
(BLAST)

0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS

Arabidopsis Description

CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.