Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25585 | Canola | nucleus | 94.55 | 98.18 |
| Bra030248.1-P | Field mustard | nucleus | 98.05 | 97.77 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 78.21 | 87.01 |
| CDX76935 | Canola | nucleus | 79.77 | 86.59 |
| AT2G22300.1 | Thale cress | cytosol | 86.09 | 85.76 |
| CDX96915 | Canola | nucleus | 6.13 | 79.75 |
| CDY61797 | Canola | nucleus | 6.42 | 58.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 11.96 | 53.71 |
| Solyc04g056270.2.1 | Tomato | nucleus | 50.1 | 50.44 |
| KRH43177 | Soybean | nucleus | 51.07 | 47.64 |
| KRH59333 | Soybean | nucleus | 50.78 | 46.52 |
| GSMUA_Achr6P10390_001 | Banana | nucleus | 48.05 | 46.38 |
| CDX92455 | Canola | cytosol | 28.6 | 46.37 |
| TraesCS5B01G521100.2 | Wheat | cytosol | 39.88 | 46.02 |
| CDX81217 | Canola | nucleus | 42.61 | 44.38 |
| OQU91909 | Sorghum | cytosol | 43.97 | 44.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.3 | 44.06 |
| Os03t0191000-01 | Rice | nucleus | 44.07 | 44.02 |
| Os10t0375600-01 | Rice | nucleus | 43.58 | 43.79 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 42.51 | 43.74 |
| Zm00001d028007_P004 | Maize | nucleus | 43.58 | 43.71 |
| CDX69907 | Canola | nucleus | 42.7 | 43.59 |
| HORVU4Hr1G078620.1 | Barley | cytosol | 44.65 | 43.3 |
| TraesCS4D01G304500.3 | Wheat | cytosol | 44.75 | 43.15 |
| TraesCS4B01G306300.4 | Wheat | cytosol | 44.75 | 43.11 |
| Zm00001d014286_P002 | Maize | nucleus | 43.48 | 43.11 |
| TraesCS4A01G407100.1 | Wheat | cytosol | 44.46 | 42.87 |
| CDY18719 | Canola | cytosol | 42.41 | 42.79 |
| OQU93088 | Sorghum | mitochondrion | 41.05 | 42.45 |
| Zm00001d030518_P005 | Maize | cytosol | 44.75 | 42.09 |
| VIT_07s0141g00250.t01 | Wine grape | nucleus | 54.86 | 41.69 |
| CDX81478 | Canola | nucleus | 6.32 | 41.4 |
| CDY45590 | Canola | cytosol | 9.63 | 32.25 |
| CDX95894 | Canola | cytosol | 26.75 | 32.24 |
| CDX92108 | Canola | cytosol | 26.75 | 32.24 |
| CDY07431 | Canola | nucleus | 28.99 | 30.88 |
| CDY28897 | Canola | nucleus | 28.89 | 30.43 |
| CDY69566 | Canola | nucleus | 8.07 | 30.4 |
| CDY51184 | Canola | nucleus | 29.67 | 29.76 |
| CDY12637 | Canola | nucleus | 29.77 | 29.59 |
| CDY58036 | Canola | nucleus | 26.26 | 29.38 |
| CDY22778 | Canola | nucleus | 26.26 | 29.38 |
| CDY01799 | Canola | nucleus | 28.5 | 28.59 |
| CDX96099 | Canola | nucleus | 28.99 | 23.69 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | GO:A0A078DJR4 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDX89451 | ProteinID:CDX89451 | ProteinID:CDX89451.1 | InterPro:CG-1_dom |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00149707001 | InterPro:IPR000048 | InterPro:IPR002110 |
| InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold |
| InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF03859 | PFscan:PS50088 | PFscan:PS50096 |
| PFscan:PS50297 | PFscan:PS51437 | PANTHER:PTHR23335 | PANTHER:PTHR23335:SF12 | SMART:SM00015 | SMART:SM01076 |
| SUPFAM:SSF48403 | SUPFAM:SSF52540 | SUPFAM:SSF81296 | UniParc:UPI0004EE0777 | SEG:seg | : |
Description
BnaC04g34700D
Coordinates
chrLK031859:+:48085..53219
Molecular Weight (calculated)
114923.0 Da
IEP (calculated)
5.388
GRAVY (calculated)
-0.548
Length
1028 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEARRFSLN NELDVGQILS EARNRWLRPP EICEILQNYQ KFQISTEPPT TPASGSVFLF DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE HFQRRSYWML QEELSHIVFV HYLEVKGSRV STSYNRMQRT EDSTQETGEV YTSERNGYAS GSINQYDHSN NQSQATDSAS VNGVHTPELE
0201: DAQSAYNQQG SPILYSHQAL QQPPATGFDP YYQMSLTPRD SYQKEIHTIP SSTMVEKSRT INGPVVTNSI KNKKSIDSQT WEEILGNCGS GGEGLPMQPH
0301: SEHEGLDQML QSYSFTMQDF ASLQESIVKS QNQELSSGLT SDRSMWFQGQ AVDIEPNALS NLASSEKAPY LSTMKQHLLD GALGEEGLKK MDSFNRWMSK
0401: ELGELGDVGV TADANESFTH SSSTAYWEEV ESEDVSNGGY VMSPSLSKEQ LFTIIDFAPN WTYVGCEVKV LVSGKFLKTA ESGEWSCMFG QTEVPADIIA
0501: NGILECVAPM HEAGRVPFYV TCSNRLACSE VREFEYKVLE SQGFDRDTDD SSTACNSIES LEARFVKLLC SKSDCTHSSL PGGNDSYLSQ VSEKISLLLF
0601: ENDDQLDQML MNEISQENMK NNLLQEALKE SLHSWLLQKI AEGGKGPNVL DEGGQGVLHF AAALGYNWAL EPTIVAGVSV DFRDVNGWTA LHWAAFFGRE
0701: LIIGSLIALG ASPGTLTDPN PDFPSGSTPS DLAYANGYKG IAGYLSEYAL RAHVSLLSLN EKNAETSLGA AVEAAPSPSS SALTDSLTAV RNASQAAARI
0801: HQVFRAQSFQ KKQMKEFGDR KLGMSEERAL SMLAPKTHRP GRGHSDDSVQ AAAIRIQNKF RGYKGRKDYL ITRQRIIKIQ AHVRGYQVRK NYRKIIWSVG
0901: ILEKVILRWR RKGAGLRGFK SDALVTKMQD GTEKEEDDDF FKQGRKQTEE RLEKALARVK SMVQYPEARD QYRRLLNVVN DIQESKVEKA LANSEEATCF
1001: DDDLIDIEAL LGDDDTLMMP MSSTLWNA
0101: CYYAHGQDNE HFQRRSYWML QEELSHIVFV HYLEVKGSRV STSYNRMQRT EDSTQETGEV YTSERNGYAS GSINQYDHSN NQSQATDSAS VNGVHTPELE
0201: DAQSAYNQQG SPILYSHQAL QQPPATGFDP YYQMSLTPRD SYQKEIHTIP SSTMVEKSRT INGPVVTNSI KNKKSIDSQT WEEILGNCGS GGEGLPMQPH
0301: SEHEGLDQML QSYSFTMQDF ASLQESIVKS QNQELSSGLT SDRSMWFQGQ AVDIEPNALS NLASSEKAPY LSTMKQHLLD GALGEEGLKK MDSFNRWMSK
0401: ELGELGDVGV TADANESFTH SSSTAYWEEV ESEDVSNGGY VMSPSLSKEQ LFTIIDFAPN WTYVGCEVKV LVSGKFLKTA ESGEWSCMFG QTEVPADIIA
0501: NGILECVAPM HEAGRVPFYV TCSNRLACSE VREFEYKVLE SQGFDRDTDD SSTACNSIES LEARFVKLLC SKSDCTHSSL PGGNDSYLSQ VSEKISLLLF
0601: ENDDQLDQML MNEISQENMK NNLLQEALKE SLHSWLLQKI AEGGKGPNVL DEGGQGVLHF AAALGYNWAL EPTIVAGVSV DFRDVNGWTA LHWAAFFGRE
0701: LIIGSLIALG ASPGTLTDPN PDFPSGSTPS DLAYANGYKG IAGYLSEYAL RAHVSLLSLN EKNAETSLGA AVEAAPSPSS SALTDSLTAV RNASQAAARI
0801: HQVFRAQSFQ KKQMKEFGDR KLGMSEERAL SMLAPKTHRP GRGHSDDSVQ AAAIRIQNKF RGYKGRKDYL ITRQRIIKIQ AHVRGYQVRK NYRKIIWSVG
0901: ILEKVILRWR RKGAGLRGFK SDALVTKMQD GTEKEEDDDF FKQGRKQTEE RLEKALARVK SMVQYPEARD QYRRLLNVVN DIQESKVEKA LANSEEATCF
1001: DDDLIDIEAL LGDDDTLMMP MSSTLWNA
0001: MAEARRFSPV HELDVGQILS EARHRWLRPP EICEILQNYQ RFQISTEPPT TPSSGSVFMF DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
0101: CYYAHGQDNE NFQRRSYWLL QEELSHIVFV HYLEVKGSRV STSFNRMQRT EDAARSPQET GDALTSEHDG YASCSFNQND HSNHSQTTDS ASVNGFHSPE
0201: LEDAESAYNQ HGSSTAYSHQ ELQQPATGGN LTGFDPYYQI SLTPRDSYQK ELRTIPVTDS SIMVDKSKTI NSPGVTNGLK NRKSIDSQTW EEILGNCGSG
0301: VEALPLQPNS EHEVLDQILE SSFTMQDFAS LQESMVKSQN QELNSGLTSD RTVWFQGQDM ELNAISNLAS NEKAPYLSTM KQHLLHGALG EEGLKKMDSF
0401: NRWMSKELGD VGVIADANES FTQSSSRTYW EEVESEDGSN GHNSRRDMDG YVMSPSLSKE QLFSINDFSP SWAYVGCEVV VFVTGKFLKT REETEIGEWS
0501: CMFGQTEVPA DVISNGILQC VAPMHEAGRV PFYVTCSNRL ACSEVREFEY KVAESQVFDR EADDESTIDI LEARFVKLLC SKSENTSPVS GNDSDLSQLS
0601: EKISLLLFEN DDQLDQMLMN EISQENMKNN LLQEFLKESL HSWLLQKIAE GGKGPSVLDE GGQGVLHFAA SLGYNWALEP TIIAGVSVDF RDVNGWTALH
0701: WAAFFGRERI IGSLIALGAA PGTLTDPNPD FPSGSTPSDL AYANGHKGIA GYLSEYALRA HVSLLSLNDK NAETVEMAPS PSSSSLTDSL TAVRNATQAA
0801: ARIHQVFRAQ SFQKKQLKEF GDKKLGMSEE RALSMLAPKT HKSGRAHSDD SVQAAAIRIQ NKFRGYKGRK DYLITRQRII KIQAHVRGYQ FRKNYRKIIW
0901: SVGVLEKVIL RWRRKGAGLR GFKSEALVEK MQDGTEKEED DDFFKQGRKQ TEDRLQKALA RVKSMVQYPE ARDQYRRLLN VVNDIQESKV EKALENSEAT
1001: CFDDDDDLID IEALLEDDDT LMLPMSSSLW TS
Arabidopsis Description
CAMTA3Calmodulin-binding transcription activator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GSA7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.