Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07431 | Canola | nucleus | 67.71 | 71.92 |
| CDY51184 | Canola | nucleus | 71.9 | 71.9 |
| CDY28897 | Canola | nucleus | 67.9 | 71.31 |
| CDY12637 | Canola | nucleus | 71.51 | 70.89 |
| CDX96099 | Canola | nucleus | 84.39 | 68.76 |
| AT1G67310.1 | Thale cress | cytosol | 67.12 | 67.72 |
| VIT_14s0036g00610.t01 | Wine grape | plastid | 8.29 | 57.43 |
| PGSC0003DMT400084738 | Potato | cytosol | 35.51 | 53.22 |
| VIT_01s0010g03850.t01 | Wine grape | nucleus | 49.46 | 52.38 |
| KRH58784 | Soybean | nucleus | 49.56 | 51.68 |
| Solyc05g015650.2.1 | Tomato | nucleus | 47.12 | 51.66 |
| KRH42689 | Soybean | cytosol | 47.9 | 50.88 |
| CDX96915 | Canola | nucleus | 3.9 | 50.63 |
| GSMUA_AchrUn_... | Banana | cytosol | 4.88 | 49.02 |
| Solyc12g035520.1.1 | Tomato | nucleus | 46.05 | 48.51 |
| GSMUA_Achr8P00680_001 | Banana | mitochondrion | 6.15 | 45.32 |
| CDY61797 | Canola | nucleus | 4.39 | 40.18 |
| EES01985 | Sorghum | nucleus | 32.88 | 39.88 |
| Zm00001d003958_P013 | Maize | nucleus | 37.56 | 39.33 |
| OQU81398 | Sorghum | nucleus | 37.85 | 38.99 |
| Os04t0388500-01 | Rice | nucleus | 37.95 | 38.78 |
| TraesCS2B01G300800.2 | Wheat | nucleus | 38.73 | 38.62 |
| Zm00001d025235_P004 | Maize | nucleus | 37.66 | 38.48 |
| TraesCS2A01G283800.1 | Wheat | nucleus | 38.44 | 38.36 |
| TraesCS2D01G282800.6 | Wheat | nucleus | 38.24 | 38.06 |
| HORVU2Hr1G069950.6 | Barley | nucleus | 37.66 | 37.7 |
| Os01t0923600-02 | Rice | nucleus | 32.1 | 37.47 |
| Zm00001d009281_P001 | Maize | cytosol | 7.22 | 37.37 |
| TraesCS3D01G426700.5 | Wheat | nucleus | 29.76 | 37.29 |
| TraesCS3B01G469100.2 | Wheat | cytosol | 28.98 | 36.89 |
| TraesCS3A01G433300.2 | Wheat | nucleus | 29.46 | 36.78 |
| Zm00001d042313_P004 | Maize | nucleus | 31.71 | 36.44 |
| HORVU3Hr1G094860.7 | Barley | cytosol, nucleus, plastid | 29.17 | 35.38 |
| CDX92455 | Canola | cytosol | 20.1 | 32.49 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 28.1 | 31.17 |
| CDX76935 | Canola | nucleus | 28.39 | 30.73 |
| CDY25585 | Canola | nucleus | 27.9 | 28.89 |
| CDY69566 | Canola | nucleus | 7.61 | 28.57 |
| CDX89451 | Canola | nucleus | 28.59 | 28.5 |
| CDX81217 | Canola | nucleus | 27.41 | 28.47 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 27.61 | 28.33 |
| CDX69907 | Canola | nucleus | 27.71 | 28.2 |
| CDX81478 | Canola | nucleus | 4.29 | 28.03 |
| CDY45590 | Canola | cytosol | 8.39 | 28.01 |
| CDY18719 | Canola | cytosol | 27.22 | 27.38 |
| CDY22778 | Canola | nucleus | 24.2 | 26.99 |
| CDY58036 | Canola | nucleus | 24.2 | 26.99 |
| CDX95894 | Canola | cytosol | 22.44 | 26.96 |
| CDX92108 | Canola | cytosol | 22.34 | 26.85 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | GO:A0A078EM35 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDY01799 | ProteinID:CDY01799 | ProteinID:CDY01799.1 | InterPro:CG-1_dom |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00112945001 | InterPro:IPR000048 |
| InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IPT_dom |
| InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF01833 |
| PFAM:PF03859 | PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 |
| PANTHER:PTHR23335 | PANTHER:PTHR23335:SF1 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 |
| SUPFAM:SSF52540 | SUPFAM:SSF81296 | UniParc:UPI0004EE4221 | SEG:seg | : | : |
Description
BnaC06g28390D
Coordinates
chrLK031929:-:369062..374522
Molecular Weight (calculated)
115426.0 Da
IEP (calculated)
8.002
GRAVY (calculated)
-0.467
Length
1025 amino acids
Sequence
(BLAST)
(BLAST)
0001: MERATEDHLT WHHYIHLRGY LSETVSQSRI LLAMQSEYDV STLYQEAHTR WLKPPEVHFI LLNHERYRLT DKPPHKPTSG SVLLYNKRVL KFFRKDGHQW
0101: KRKKDGRAIA EAHERLKVGN VEALQCYYAH GEHEPSFQRR IYWILDPEYE HIALVHYRDV SDGKEGKHSS GTVVQFSPNP SDLFSSPVSI GTQNASYSHL
0201: IGDSTDIHQH HSSTSPGVNS DVVFKSNGVE TTPKGSGSSY EFETREALKR LEEQLSLGDD NNVVHNESLD GLQFLDFSTD VDHLVPPLAT VHQRPESSSK
0301: LGRCYGGYVG GAQYNVSTRA ENNRLGRCYG GYIGAEYHSN NLMLVKNDSG KPNLYIIDFR YHGDQKAESW KDVLEACEAS IALNSEGSTP SSAKGLLTGM
0401: QEDSNLSYSN QADQATLLLP QELASSFELP TCYSELGALA NNANNSRMEL PFEQVMNQTV AYKQKFTIQD ISPEWGYANE TTKVIIIGSF LCDTTWSCMF
0501: GSTEVPFEII KEGVLRCQAP PCGPGKVNLC ITSGDGLSCS QIKEFEYREK PDDTSCPWSS RDELLLLVRL VQTLVSDSKS NLEPWSHILE TILDGTATSS
0601: STVDWLLQEL LKDKLDVWLS SRPRQDEDQT SCCSLSKQEQ GIIHMVAGLG FEWALHPILA RGVSVDFRDI NGWSALHWAA RFGSEKLVAA LIASGASAGA
0701: VTDPTAQDPA GKTAASIAAS NGHKGLAGYL SEVALTNHLS SLTLEETESS KDTAHLQAEM TLNSISERSP HSLKDTLAAV RNAAQAVARI QAAFRAHSFR
0801: KRQQREAAMA SYFQEYGIYA DIKGVSAMSK QAFGNVKSYH SAALSIQKNY RRYKRRKEFL LLRQKVVKIQ AHVRGYQIRK HYKVICWAVG ILDKVVLRWR
0901: RKGAGLRGFR QDVEDSEEED ILKVFRKQKV DAAVNEAFSR VLSMANSPEA RQQYHRVLKR YCQTKINETK YNGTKYWNEY FILVSRLSLG RQRHKEKVVM
1001: RMKICLTWLI WKMTVCLHFR GCSSV
0101: KRKKDGRAIA EAHERLKVGN VEALQCYYAH GEHEPSFQRR IYWILDPEYE HIALVHYRDV SDGKEGKHSS GTVVQFSPNP SDLFSSPVSI GTQNASYSHL
0201: IGDSTDIHQH HSSTSPGVNS DVVFKSNGVE TTPKGSGSSY EFETREALKR LEEQLSLGDD NNVVHNESLD GLQFLDFSTD VDHLVPPLAT VHQRPESSSK
0301: LGRCYGGYVG GAQYNVSTRA ENNRLGRCYG GYIGAEYHSN NLMLVKNDSG KPNLYIIDFR YHGDQKAESW KDVLEACEAS IALNSEGSTP SSAKGLLTGM
0401: QEDSNLSYSN QADQATLLLP QELASSFELP TCYSELGALA NNANNSRMEL PFEQVMNQTV AYKQKFTIQD ISPEWGYANE TTKVIIIGSF LCDTTWSCMF
0501: GSTEVPFEII KEGVLRCQAP PCGPGKVNLC ITSGDGLSCS QIKEFEYREK PDDTSCPWSS RDELLLLVRL VQTLVSDSKS NLEPWSHILE TILDGTATSS
0601: STVDWLLQEL LKDKLDVWLS SRPRQDEDQT SCCSLSKQEQ GIIHMVAGLG FEWALHPILA RGVSVDFRDI NGWSALHWAA RFGSEKLVAA LIASGASAGA
0701: VTDPTAQDPA GKTAASIAAS NGHKGLAGYL SEVALTNHLS SLTLEETESS KDTAHLQAEM TLNSISERSP HSLKDTLAAV RNAAQAVARI QAAFRAHSFR
0801: KRQQREAAMA SYFQEYGIYA DIKGVSAMSK QAFGNVKSYH SAALSIQKNY RRYKRRKEFL LLRQKVVKIQ AHVRGYQIRK HYKVICWAVG ILDKVVLRWR
0901: RKGAGLRGFR QDVEDSEEED ILKVFRKQKV DAAVNEAFSR VLSMANSPEA RQQYHRVLKR YCQTKINETK YNGTKYWNEY FILVSRLSLG RQRHKEKVVM
1001: RMKICLTWLI WKMTVCLHFR GCSSV
0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
Arabidopsis Description
CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.