Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004218.1-P | Field mustard | nucleus | 23.37 | 99.66 |
| Bra004217.1-P | Field mustard | nucleus | 75.68 | 95.49 |
| CDY01799 | Canola | nucleus | 68.76 | 84.39 |
| CDY07431 | Canola | nucleus | 55.64 | 72.54 |
| CDY51184 | Canola | nucleus | 59.06 | 72.49 |
| CDY12637 | Canola | nucleus | 59.38 | 72.24 |
| CDY28897 | Canola | nucleus | 55.96 | 72.13 |
| AT1G67310.1 | Thale cress | cytosol | 56.6 | 70.08 |
| VIT_14s0036g00610.t01 | Wine grape | plastid | 6.76 | 57.43 |
| PGSC0003DMT400084738 | Potato | cytosol | 29.25 | 53.8 |
| Solyc05g015650.2.1 | Tomato | nucleus | 37.84 | 50.91 |
| KRH58784 | Soybean | nucleus | 39.75 | 50.86 |
| VIT_01s0010g03850.t01 | Wine grape | nucleus | 39.03 | 50.72 |
| CDX96915 | Canola | nucleus | 3.18 | 50.63 |
| KRH42689 | Soybean | cytosol | 38.39 | 50.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 3.9 | 48.04 |
| Solyc12g035520.1.1 | Tomato | nucleus | 36.8 | 47.58 |
| GSMUA_Achr8P00680_001 | Banana | mitochondrion | 4.93 | 44.6 |
| EES01985 | Sorghum | nucleus | 26.79 | 39.88 |
| Zm00001d003958_P013 | Maize | nucleus | 30.68 | 39.43 |
| OQU81398 | Sorghum | nucleus | 31.16 | 39.4 |
| CDY61797 | Canola | nucleus | 3.5 | 39.29 |
| Os04t0388500-01 | Rice | nucleus | 31.32 | 39.28 |
| TraesCS2B01G300800.2 | Wheat | nucleus | 31.88 | 39.01 |
| Zm00001d025235_P004 | Maize | nucleus | 31.0 | 38.88 |
| TraesCS2A01G283800.1 | Wheat | nucleus | 31.56 | 38.66 |
| TraesCS2D01G282800.6 | Wheat | nucleus | 31.4 | 38.35 |
| HORVU2Hr1G069950.6 | Barley | nucleus | 30.92 | 37.99 |
| TraesCS3D01G426700.5 | Wheat | nucleus | 24.17 | 37.16 |
| TraesCS3B01G469100.2 | Wheat | cytosol | 23.69 | 37.02 |
| TraesCS3A01G433300.2 | Wheat | nucleus | 24.09 | 36.91 |
| Os01t0923600-02 | Rice | nucleus | 25.76 | 36.9 |
| Zm00001d042313_P004 | Maize | nucleus | 25.91 | 36.55 |
| Zm00001d009281_P001 | Maize | cytosol | 5.72 | 36.36 |
| HORVU3Hr1G094860.7 | Barley | cytosol, nucleus, plastid | 24.09 | 35.86 |
| CDX92455 | Canola | cytosol | 16.14 | 32.02 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 23.37 | 31.82 |
| CDX76935 | Canola | nucleus | 23.61 | 31.36 |
| CDY25585 | Canola | nucleus | 23.13 | 29.39 |
| CDX81478 | Canola | nucleus | 3.66 | 29.3 |
| CDX89451 | Canola | nucleus | 23.69 | 28.99 |
| CDY45590 | Canola | cytosol | 6.92 | 28.34 |
| CDX81217 | Canola | nucleus | 22.02 | 28.06 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 22.18 | 27.93 |
| CDY69566 | Canola | nucleus | 6.04 | 27.84 |
| CDX69907 | Canola | nucleus | 22.1 | 27.61 |
| CDX95894 | Canola | cytosol | 18.44 | 27.2 |
| CDY22778 | Canola | nucleus | 19.79 | 27.09 |
| CDY58036 | Canola | nucleus | 19.79 | 27.09 |
| CDX92108 | Canola | cytosol | 18.36 | 27.08 |
| CDY18719 | Canola | cytosol | 21.86 | 26.99 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | Gene3D:4.10.1060.10 | GO:A0A078E636 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EnsemblPlants:CDX96099 | ProteinID:CDX96099 | ProteinID:CDX96099.1 |
| InterPro:CG-1_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00102145001 | InterPro:IPR000048 |
| InterPro:IPR001876 | InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 |
| InterPro:IPT_dom | InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 |
| PFAM:PF00641 | PFAM:PF01833 | PFAM:PF03859 | PFAM:PF12796 | PFscan:PS50088 | PFscan:PS50096 |
| PFscan:PS50297 | PFscan:PS51437 | PANTHER:PTHR23335 | PANTHER:PTHR23335:SF1 | SMART:SM00015 | SMART:SM00248 |
| SMART:SM00547 | SMART:SM01076 | SUPFAM:SSF48403 | SUPFAM:SSF52540 | SUPFAM:SSF81296 | SUPFAM:SSF90209 |
| UniParc:UPI0004EE8034 | InterPro:Znf_RanBP2 | InterPro:Znf_RanBP2_sf | SEG:seg | : | : |
Description
BnaA07g26320D
Coordinates
chrLK031892:+:1030892..1039831
Molecular Weight (calculated)
139570.0 Da
IEP (calculated)
8.017
GRAVY (calculated)
-0.603
Length
1258 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSQVDNRNSS AAKRARTDGG RREDDWTCPS CGNVNFSFRT TCNMRNCTQS RPADHNGKSA PRPMQPHQSF SSPGRYLGSG APSPVLMGGS PYGSSLFNGS
0101: SMSPYDVPFS GGSPYHFNYN SRFPPAGPHY RPFHMSGPPS PYHGRSMMGS GMYGMALPPM DRFGFGMAMS PAAAAAMMPR PGGYFADEKS QKRDLSREND
0201: WACPNCGNVN FSFRTMCNMR KCNTPKPGPQ LQQCGSSDKT SNQKAPEGSW KCDSCGNINY PFRSKCNRQN CGADKPGNQS NESPSNAPED NDKAKSFFFF
0301: EEYDVSTLYR EAHTRWLKPP EVHFILLNHE RYRLTDKPPH KPSSGSVLLY NKRVLKFFRK DGHQWKRKKD GRAIAEAHER LKASYILVGN VEALQCYYAH
0401: GEHEPSFQRR IYWILDPEYE HIALVHYRDV SDGKEVKQQT GGTVLHFSPN PSTLGSIGTQ NASYSHCIGV SSEIHQQQHS SASAGNVEVN SDTSKGSGSL
0501: SYEFETREAL KRLEEQLSLG DDDNVVQNES LDGLQFLGFS KTDIDHHLVP PATVHQRPES SSKLGRCYGG YVGGAQCNRA ENNRLERCYG GYIGAEYHSN
0601: NLMLVKNDSG RPNLYIIGSG DQKAESWKDV LEACEASIAL NSEGSTPSSA KGLLTRMQED SNLSYSNQAD QATLLLPQEL GPSFELPTRY SELGALANNA
0701: NNSRMELPFE QVMNQTVAHK QKFTIQDISP EWGYANETTK VMIIGSFLCD PKESTWSCMF GSTEVPFEII KEGVIRCQAP PCGPGKVNLC IASGDGLSCS
0801: QIKEFEYRDK PDDTSCPWSS RDELLLLVRL VQTLVSDSKS NLEPWSHILE TVLDGTATSS STVDWLLQEL VKEKLDAWLS SRPRQVEDQT SCCSLSKQEQ
0901: GIIHMVAGLG FEWALHPILS RGVSVDFRDI NGWSALHWAA RFGSEKMVAA LIASGASAGA VTDPTAQDPA GKTAASIAAS NGHKGLAGYL SEVALTNHLS
1001: SLTLEETEKS KETAQLQAEV TLNSISERSP HSLKDSLAAV RNAAQAVARI QAAFRAHSFR KRQQREAAMA AYFQEYGIYA DIKGISAISK VAPGNVKNYH
1101: SAALSIQKNY RRYKRRKEFL SLRKKVVKIQ AHVRGYQIRK HYKVICWAVG ILDKVVLRWR RKGAGLRGFR QDVEDSEEED ILKVFRKQKV DVAVKEAFSR
1201: VLSMAKSPEA RQQYHRVLKR YCQTKAELGK TETLGAGGDE DEDLFDLADM EDDSLFAL
0101: SMSPYDVPFS GGSPYHFNYN SRFPPAGPHY RPFHMSGPPS PYHGRSMMGS GMYGMALPPM DRFGFGMAMS PAAAAAMMPR PGGYFADEKS QKRDLSREND
0201: WACPNCGNVN FSFRTMCNMR KCNTPKPGPQ LQQCGSSDKT SNQKAPEGSW KCDSCGNINY PFRSKCNRQN CGADKPGNQS NESPSNAPED NDKAKSFFFF
0301: EEYDVSTLYR EAHTRWLKPP EVHFILLNHE RYRLTDKPPH KPSSGSVLLY NKRVLKFFRK DGHQWKRKKD GRAIAEAHER LKASYILVGN VEALQCYYAH
0401: GEHEPSFQRR IYWILDPEYE HIALVHYRDV SDGKEVKQQT GGTVLHFSPN PSTLGSIGTQ NASYSHCIGV SSEIHQQQHS SASAGNVEVN SDTSKGSGSL
0501: SYEFETREAL KRLEEQLSLG DDDNVVQNES LDGLQFLGFS KTDIDHHLVP PATVHQRPES SSKLGRCYGG YVGGAQCNRA ENNRLERCYG GYIGAEYHSN
0601: NLMLVKNDSG RPNLYIIGSG DQKAESWKDV LEACEASIAL NSEGSTPSSA KGLLTRMQED SNLSYSNQAD QATLLLPQEL GPSFELPTRY SELGALANNA
0701: NNSRMELPFE QVMNQTVAHK QKFTIQDISP EWGYANETTK VMIIGSFLCD PKESTWSCMF GSTEVPFEII KEGVIRCQAP PCGPGKVNLC IASGDGLSCS
0801: QIKEFEYRDK PDDTSCPWSS RDELLLLVRL VQTLVSDSKS NLEPWSHILE TVLDGTATSS STVDWLLQEL VKEKLDAWLS SRPRQVEDQT SCCSLSKQEQ
0901: GIIHMVAGLG FEWALHPILS RGVSVDFRDI NGWSALHWAA RFGSEKMVAA LIASGASAGA VTDPTAQDPA GKTAASIAAS NGHKGLAGYL SEVALTNHLS
1001: SLTLEETEKS KETAQLQAEV TLNSISERSP HSLKDSLAAV RNAAQAVARI QAAFRAHSFR KRQQREAAMA AYFQEYGIYA DIKGISAISK VAPGNVKNYH
1101: SAALSIQKNY RRYKRRKEFL SLRKKVVKIQ AHVRGYQIRK HYKVICWAVG ILDKVVLRWR RKGAGLRGFR QDVEDSEEED ILKVFRKQKV DVAVKEAFSR
1201: VLSMAKSPEA RQQYHRVLKR YCQTKAELGK TETLGAGGDE DEDLFDLADM EDDSLFAL
0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
Arabidopsis Description
CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.