CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69907	Canola	nucleus	93.06	58.59
CDY21580	Canola	cytosol, nucleus, plastid	88.8	56.36
CDX81217	Canola	nucleus	78.55	50.46
CDY18719	Canola	cytosol	79.02	49.17
AT5G09410.3	Thale cress	cytosol	81.07	48.22
KRH10541	Soybean	nucleus	58.99	34.38
KRH43898	Soybean	nucleus	58.2	34.14
GSMUA_AchrUn_...	Banana	cytosol	49.21	34.02
KRH42152	Soybean	nucleus	57.89	34.01
KRH58270	Soybean	nucleus	57.73	33.64
Solyc01g105230.2.1	Tomato	nucleus	52.84	32.21
TraesCS5B01G521100.2	Wheat	cytosol	44.01	31.31
CDY13771	Canola	cytosol, nucleus, plastid	45.43	31.17
OQU93088	Sorghum	mitochondrion	47.63	30.38
CDX76935	Canola	nucleus	44.64	29.88
Zm00001d028007_P004	Maize	nucleus	48.11	29.76
CDY45590	Canola	cytosol	14.35	29.64
Os03t0191000-01	Rice	nucleus	48.11	29.64
GSMUA_Achr6P10390_001	Banana	nucleus	49.68	29.58
OQU91909	Sorghum	cytosol	46.53	28.86
Zm00001d014286_P002	Maize	nucleus	46.85	28.64
CDX89451	Canola	nucleus	46.37	28.6
Os10t0375600-01	Rice	nucleus	46.06	28.54
CDY25585	Canola	nucleus	44.01	28.18
HORVU4Hr1G078620.1	Barley	cytosol	47.0	28.11
TraesCS4D01G304500.3	Wheat	cytosol	47.0	27.95
TraesCS4A01G407100.1	Wheat	cytosol	46.85	27.86
TraesCS4B01G306300.4	Wheat	cytosol	46.85	27.84
Zm00001d030518_P005	Maize	cytosol	46.21	26.81
CDY07431	Canola	nucleus	32.02	21.04
CDY28897	Canola	nucleus	31.55	20.49
CDY51184	Canola	nucleus	33.12	20.49
CDY12637	Canola	nucleus	32.97	20.21
CDY01799	Canola	nucleus	32.49	20.1
CDY58036	Canola	nucleus	28.39	19.59
CDY22778	Canola	nucleus	28.39	19.59
CDX95894	Canola	cytosol	26.18	19.46
CDX92108	Canola	cytosol	26.03	19.34
CDX96099	Canola	nucleus	32.02	16.14
GSMUA_AchrUn_...	Banana	nucleus	0.16	0.44
CDY69566	Canola	nucleus	0.0	0.0
CDY61797	Canola	nucleus	0.0	0.0
CDX96915	Canola	nucleus	0.0	0.0
CDX81478	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX92455	ProteinID:CDX92455	ProteinID:CDX92455.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00154224001	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR013783
InterPro:IPR020683	InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	InterPro:P-loop_NTPase
PFAM:PF00612	PFAM:PF12796	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297	PANTHER:PTHR23335
PANTHER:PTHR23335:SF12	SMART:SM00015	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296
UniParc:UPI0004EDBE4C	SEG:seg	:	:	:	:

Description

BnaA10g14940D

Coordinates

chrLK031872:-:739226..741742

Molecular Weight (calculated)

70961.7 Da

IEP (calculated)

5.697

GRAVY (calculated)

-0.429

Length

634 amino acids

Sequence
(BLAST)

001: MQSSRGDIAW TSVDCETAAA GVAFSPSLSE DQRFTILDYW PKCAQTDADV EVVVIGTFLL SPQEVTICSW SCMFGEVEVP AEILVDGVLC CHAPPHTAGQ
101: VPFYVTCSNR FACSELREFD FRSGSTKKID AAGIYGYSTK EASLQMRFEK LLAHRDFVQE HQIFEDVVEK RRKISKIILL NEEKENLFPR IYERHSTKQE
201: PKELVLRQQF EDELYIWLIH KVTEEGKGPN ILDEGGQGVL HFVAALGYDW AIKPILAAGV NINFRDANGW SALHWAAFSG REETVAVLVS LGADAGALTD
301: PSPELPLGKT AADLAYGKEH RGISGFLAES SLTSYLEKLT MESKENSPAN SGGPKAVQTV SERTAAPMSS GDIPETLSLK DSLTAVRNAT QAADRLHQVF
401: RMQSFQRKQL SGFDVDDDDE IGISNELAVS FAASKTKNPG QSEIFVHSAA THIQKKYRGW KKRKEFLLIR QRVVKIQAHV RGHQVRKQYR AIIWSVGLLE
501: KIILRWRRKG SGLRGFKRDT VTKAPEPVCA APTQEDDYDF LKEGRKQTEE RLQKALTRVK SMAQYPEARA QYRRLLTVVE GIRENEASSS SAMNNNNNNN
601: NSNTEEAANY NEEDDLIDID SLLDDDTFMS LAFE

Best Arabidopsis Sequence Match ( AT5G09410.4 )
(BLAST)

001: MLEQHLMHIV FVHYLEVKGN RTSIGMKENN SNSVNGTASV NIDSTASPTS TLSSLCEDAD TGDSQQASSV LRPSPEPQTG NRYGWTPAPG MRNVSQVHGN
101: RVRESDSQRL VDVRALDTVG NSLTRFHDQP YCNNLLTQMQ PSNTDSMLVE ENSEKGGRLK AEHIRNPLQT QFNWQDDTDL ALFEQSAQDN FETFSSLLGS
201: ENLQPFGISY QAPPSNMDSE YMPVMKILRR SEDSLKKVDS FSKWAIKELG EMEDLQMQSS RGDIAWTTVE CETAAAGISL SPSLSEDQRF TIVDFWPKSA
301: KTDAEVEVMV IGTFLLSPQE VTKYNWSCMF GEVEVPAEIL VDGVLCCHAP PHTAGHVPFY VTCSNRFACS EVREFDFLSG STQKINATDV YGTYTNEASL
401: QLRFEKMLAH RDFVHEHHIF EDVGDKRRQI SKIMLLKEEK EYLLPGTYQR DSTKQEPKGQ LFRELFEEEL YIWLIHKVTE EGKGPNILDE DGQGILHFVA
501: ALGYDWAIKP VLAAGVNINF RDANGWSALH WAAFSGREET VAVLVSLGAD AGALTDPSPE LPLGKTAADL AYANGHRGIS GFLAESSLTS YLEKLTVDSK
601: ENSPANSCGE KAVQTVSERT AAPMTYGDVP EKLSLKDSLT AVRNATQAAD RLHQVFRMQS FQRKQLCDIG DDEKIDISDQ LAVSFAASKT KNPGQGDVSL
701: SCAATHIQKK YRGWKKRKEF LLIRQRIVKI QAHVRGHQVR KQYRTVIWSV GLLEKIILRW RRKGNGLRGF KRNAVAKTVE PEPPVSAICP RIPQEDEYDY
801: LKEGRKQTEE RLQKALTRVK SMVQYPEARD QYRRLLTVVE GFRENEASSS ASINNKEEEA VNCEEDDFID IESLLNDDTL MMSISP

Arabidopsis Description

EICBP.BEthylene induced calmodulin binding protein [Source:UniProtKB/TrEMBL;Acc:F4KCL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.