Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G304500.3 | Wheat | cytosol | 98.59 | 98.59 |
| TraesCS4B01G306300.4 | Wheat | cytosol | 98.12 | 98.03 |
| HORVU4Hr1G078620.1 | Barley | cytosol | 95.03 | 95.57 |
| Os03t0191000-01 | Rice | nucleus | 77.86 | 80.66 |
| OQU93088 | Sorghum | mitochondrion | 71.86 | 77.06 |
| Zm00001d028007_P004 | Maize | nucleus | 72.8 | 75.71 |
| GSMUA_Achr6P10390_001 | Banana | nucleus | 53.38 | 53.43 |
| TraesCS2A01G163000.1 | Wheat | cytosol | 48.5 | 50.39 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.34 | 50.38 |
| Solyc04g056270.2.1 | Tomato | nucleus | 46.72 | 48.78 |
| CDY13771 | Canola | cytosol, nucleus, plastid | 41.37 | 47.73 |
| Bra038534.1-P | Field mustard | nucleus | 41.46 | 47.53 |
| CDX92455 | Canola | cytosol | 27.86 | 46.85 |
| CDX76935 | Canola | nucleus | 41.56 | 46.78 |
| KRH43177 | Soybean | nucleus | 47.75 | 46.19 |
| KRH42152 | Soybean | nucleus | 46.62 | 46.06 |
| KRH58270 | Soybean | nucleus | 46.72 | 45.77 |
| CDY25585 | Canola | nucleus | 42.31 | 45.56 |
| KRH59333 | Soybean | nucleus | 47.94 | 45.54 |
| KRH10541 | Soybean | nucleus | 46.15 | 45.22 |
| CDX81217 | Canola | nucleus | 41.74 | 45.09 |
| AT2G22300.1 | Thale cress | cytosol | 43.53 | 44.96 |
| Solyc01g105230.2.1 | Tomato | nucleus | 43.62 | 44.71 |
| KRH43898 | Soybean | nucleus | 45.31 | 44.68 |
| CDY21580 | Canola | cytosol, nucleus, plastid | 41.84 | 44.64 |
| AT5G64220.2 | Thale cress | nucleus | 43.81 | 44.48 |
| CDX89451 | Canola | nucleus | 42.87 | 44.46 |
| Bra030248.1-P | Field mustard | nucleus | 42.96 | 44.42 |
| Bra009382.1-P | Field mustard | nucleus | 41.84 | 44.29 |
| CDX69907 | Canola | nucleus | 41.84 | 44.29 |
| CDY18719 | Canola | cytosol | 41.46 | 43.38 |
| Bra037769.1-P | Field mustard | cytosol | 41.56 | 43.09 |
| AT5G09410.3 | Thale cress | cytosol | 41.09 | 41.09 |
| VIT_07s0141g00250.t01 | Wine grape | nucleus | 47.75 | 37.62 |
| TraesCS2A01G283800.1 | Wheat | nucleus | 28.99 | 30.09 |
| TraesCS3A01G433300.2 | Wheat | nucleus | 22.98 | 29.84 |
| TraesCS2A01G229400.1 | Wheat | nucleus | 24.58 | 28.89 |
Protein Annotations
| Gene3D:1.20.5.190 | Gene3D:1.25.40.20 | MapMan:15.5.26 | Gene3D:2.60.40.10 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | InterPro:CG-1_dom | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR000048 | InterPro:IPR002110 | InterPro:IPR005559 | InterPro:IPR013783 | InterPro:IPR020683 | InterPro:IPR036770 |
| InterPro:IPT_dom | InterPro:IQ_motif_EF-hand-BS | InterPro:Ig-like_fold | InterPro:Ig_E-set | InterPro:P-loop_NTPase | PFAM:PF00612 |
| PFAM:PF01833 | PFAM:PF03859 | PFscan:PS50088 | PFscan:PS50096 | PFscan:PS50297 | PFscan:PS51437 |
| PANTHER:PTHR23335 | PANTHER:PTHR23335:SF7 | SMART:SM00015 | SMART:SM00248 | SMART:SM01076 | SUPFAM:SSF48403 |
| SUPFAM:SSF52540 | SUPFAM:SSF81296 | EnsemblPlantsGene:TraesCS4A01G407100 | EnsemblPlants:TraesCS4A01G407100.1 | TIGR:cd00102 | TIGR:cd00204 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:679981925..679989834
Molecular Weight (calculated)
119324.0 Da
IEP (calculated)
5.884
GRAVY (calculated)
-0.552
Length
1066 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEGRRYGIA PQLDMEQILK EAQTRWLRPT EICEILKNYR NFRIAPEPPN MPASGSLFLF DRKVLRFFRK DGHNWRKKKD GKTVKEAHER LKSGSIDVLH
0101: CYYAHGEENI NFQRRSYWML EEDYMHIVLV HYLEVKAGKS SSRTRGHDNM LQGAYVDSPL SHLPSQSTDG ESSLSGRASE YEAESADIYS GGAGYHSISR
0201: MQQHENGGGS IIDASVVSSY SPASSVGNHQ GLQATSPNTG FYSHYQDNSP VIHNESTFGI TFNGPSTQFD LSSWNEMTKL NKEIHQLPPY QSHVPSEQPP
0301: FTEGPGIESF SFDEVYSNGL DIKDDGHADT DREALWQLPS ANDGTTTEFL QLPSAIDGRT TEFQLPSATD STFATVDNFE QHSKLLEEAI NFPVLKTQSS
0401: NLSDILKNSF KKSDSFTRWM SKELAEVDDS QVKFSSGLYW NSEDADNIIG ASSRDQLDQF TLDPMVAQDQ LFSITEYFPS WTYAGSKTRV LVTGRFLTSD
0501: EVIKLKWSCM FGEVEVPADI LADGTLRCYS PSHKPGRVPF YVTCSNRLAC SEVREFEYRP SDSQYMDAPS PHGATNKIYL QARLDELLSL GRDQQDEFQA
0601: ALSNPTKELI DLNKKITSLM TNNDQWSELL KFADDNQLAP DDRQDQFVES GIKEKLHIWL LHKAGGGGKG PSVLDDEGQG ILHLAAALGY DWAIRPTITA
0701: GVSINFRDVH GWTALHWAAF CGRERTVVAL IALGAAPGAL TDPRPDFPSG RTPADLASFN GHKGISGFLA EFSLTSHLQT LNLKEAMGSN ASEISGLPGI
0801: GDVTGRTASP SAGQGLQAGS MGDSLGAVRN AAQAAARIYQ VFRVQSFQRK QAVQYEDDNG VISDERAMSL LSYKPSKPGQ FDPMHAAATR IQNKFRGWKG
0901: RKEFLLIRQR IVKIQAHVRG HQVRKHYRKI IWSVGIVEKV ILRWRRRGAG LRGFRSTEVA TDSSTSSSSV DVIPVKPAED DYNFLQEGRK QTEERLQRAL
1001: ARVKSMVQYP EARDQYQRIM TVVTKMQESQ PVEESMLEES TEMDEGFLMS EFKELWDDDM PLPGYF
0101: CYYAHGEENI NFQRRSYWML EEDYMHIVLV HYLEVKAGKS SSRTRGHDNM LQGAYVDSPL SHLPSQSTDG ESSLSGRASE YEAESADIYS GGAGYHSISR
0201: MQQHENGGGS IIDASVVSSY SPASSVGNHQ GLQATSPNTG FYSHYQDNSP VIHNESTFGI TFNGPSTQFD LSSWNEMTKL NKEIHQLPPY QSHVPSEQPP
0301: FTEGPGIESF SFDEVYSNGL DIKDDGHADT DREALWQLPS ANDGTTTEFL QLPSAIDGRT TEFQLPSATD STFATVDNFE QHSKLLEEAI NFPVLKTQSS
0401: NLSDILKNSF KKSDSFTRWM SKELAEVDDS QVKFSSGLYW NSEDADNIIG ASSRDQLDQF TLDPMVAQDQ LFSITEYFPS WTYAGSKTRV LVTGRFLTSD
0501: EVIKLKWSCM FGEVEVPADI LADGTLRCYS PSHKPGRVPF YVTCSNRLAC SEVREFEYRP SDSQYMDAPS PHGATNKIYL QARLDELLSL GRDQQDEFQA
0601: ALSNPTKELI DLNKKITSLM TNNDQWSELL KFADDNQLAP DDRQDQFVES GIKEKLHIWL LHKAGGGGKG PSVLDDEGQG ILHLAAALGY DWAIRPTITA
0701: GVSINFRDVH GWTALHWAAF CGRERTVVAL IALGAAPGAL TDPRPDFPSG RTPADLASFN GHKGISGFLA EFSLTSHLQT LNLKEAMGSN ASEISGLPGI
0801: GDVTGRTASP SAGQGLQAGS MGDSLGAVRN AAQAAARIYQ VFRVQSFQRK QAVQYEDDNG VISDERAMSL LSYKPSKPGQ FDPMHAAATR IQNKFRGWKG
0901: RKEFLLIRQR IVKIQAHVRG HQVRKHYRKI IWSVGIVEKV ILRWRRRGAG LRGFRSTEVA TDSSTSSSSV DVIPVKPAED DYNFLQEGRK QTEERLQRAL
1001: ARVKSMVQYP EARDQYQRIM TVVTKMQESQ PVEESMLEES TEMDEGFLMS EFKELWDDDM PLPGYF
0001: MADRGSFGFA PRLDIKQLLS EAQHRWLRPA EICEILRNHQ KFHIASEPPN RPPSGSLFLF DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSIDVLH
0101: CYYAHGEDNE NFQRRCYWML EQDLMHIVFV HYLEVKGNRM STSGTKENHS NSLSGTGSVN VDSTATRSSI LSPLCEDADS GDSRQASSSL QQNPEPQTVV
0201: PQIMHHQNAS TINSYNTTSV LGNRDGWTSA HGNRVKGSNS QRSGDVPAWD ASFENSLARY QNLPYNAPLT QTQPSTFGLI PMEGKTEKGS LLTSEHLRNP
0301: LQSQVNWQTP VQESVPLQKW PMDSHSGMTD ATDLALFGQG AHENFGTFSS LLGSQDQQSS SFQAPFTNNE AAYIPKLGPE DLIYEASANQ TLPLRKALLK
0401: KEDSLKKVDS FSRWVSKELG EMEDLQMQSS SGGIAWTSVE CENAAAGSSL SPSLSEDQRF TMIDFWPKWT QTDSEVEVMV IGTFLLSPQE VTSYSWSCMF
0501: GEVEVPADIL VDGVLCCHAP PHEVGRVPFY ITCSDRFSCS EVREFDFLPG STRKLNATDI YGANTIETSL HLRFENLLAL RCSVQEHHIF ENVGEKRRKI
0601: SKIMLLKDEK EPPLPGTIEK DLTELEAKER LIREEFEDKL YLWLIHKVTE EGKGPNILDE DGQGVLHLAA ALGYDWAIKP ILAAGVSINF RDANGWSALH
0701: WAAFSGREDT VAVLVSLGAD AGALADPSPE HPLGKTAADL AYGNGHRGIS GFLAESSLTS YLEKLTVDAK ENSSADSSGA KAVLTVAERT ATPMSYGDVP
0801: ETLSMKDSLT AVLNATQAAD RLHQVFRMQS FQRKQLSELG GDNKFDISDE LAVSFAAAKT KKSGHSSGAV HAAAVQIQKK YRGWKKRKEF LLIRQRIVKI
0901: QAHVRGHQVR KQYRAIIWSV GLLEKIILRW RRKGSGLRGF KRDTISKPTE PVCPAPQEDD YDFLKEGRKQ TEERLQKALT RVKSMAQYPE ARAQYRRLLT
1001: VVEGFRENEA SSSSALKNNT EEAANYNEED DLIDIDSLLD DDTFMSLAFE
0101: CYYAHGEDNE NFQRRCYWML EQDLMHIVFV HYLEVKGNRM STSGTKENHS NSLSGTGSVN VDSTATRSSI LSPLCEDADS GDSRQASSSL QQNPEPQTVV
0201: PQIMHHQNAS TINSYNTTSV LGNRDGWTSA HGNRVKGSNS QRSGDVPAWD ASFENSLARY QNLPYNAPLT QTQPSTFGLI PMEGKTEKGS LLTSEHLRNP
0301: LQSQVNWQTP VQESVPLQKW PMDSHSGMTD ATDLALFGQG AHENFGTFSS LLGSQDQQSS SFQAPFTNNE AAYIPKLGPE DLIYEASANQ TLPLRKALLK
0401: KEDSLKKVDS FSRWVSKELG EMEDLQMQSS SGGIAWTSVE CENAAAGSSL SPSLSEDQRF TMIDFWPKWT QTDSEVEVMV IGTFLLSPQE VTSYSWSCMF
0501: GEVEVPADIL VDGVLCCHAP PHEVGRVPFY ITCSDRFSCS EVREFDFLPG STRKLNATDI YGANTIETSL HLRFENLLAL RCSVQEHHIF ENVGEKRRKI
0601: SKIMLLKDEK EPPLPGTIEK DLTELEAKER LIREEFEDKL YLWLIHKVTE EGKGPNILDE DGQGVLHLAA ALGYDWAIKP ILAAGVSINF RDANGWSALH
0701: WAAFSGREDT VAVLVSLGAD AGALADPSPE HPLGKTAADL AYGNGHRGIS GFLAESSLTS YLEKLTVDAK ENSSADSSGA KAVLTVAERT ATPMSYGDVP
0801: ETLSMKDSLT AVLNATQAAD RLHQVFRMQS FQRKQLSELG GDNKFDISDE LAVSFAAAKT KKSGHSSGAV HAAAVQIQKK YRGWKKRKEF LLIRQRIVKI
0901: QAHVRGHQVR KQYRAIIWSV GLLEKIILRW RRKGSGLRGF KRDTISKPTE PVCPAPQEDD YDFLKEGRKQ TEERLQKALT RVKSMAQYPE ARAQYRRLLT
1001: VVEGFRENEA SSSSALKNNT EEAANYNEED DLIDIDSLLD DDTFMSLAFE
Arabidopsis Description
CAMTA2Calmodulin-binding transcription activator 2 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPP4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.