Factsheet for Zm00001d042313_P004

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01985	Sorghum	nucleus	81.73	86.27
TraesCS3A01G433300.2	Wheat	nucleus	59.75	64.92
TraesCS3D01G426700.5	Wheat	nucleus	58.63	63.94
TraesCS3B01G469100.2	Wheat	cytosol	57.62	63.85
Os01t0923600-02	Rice	nucleus	62.78	63.78
HORVU3Hr1G094860.7	Barley	cytosol, nucleus, plastid	57.29	60.47
KRH15615	Soybean	cytosol	14.46	40.69
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	35.65	40.25
VIT_14s0036g00610.t01	Wine grape	plastid	6.61	39.86
GSMUA_Achr8P00690_001	Banana	endoplasmic reticulum	33.74	38.59
Zm00001d009281_P001	Maize	cytosol	7.96	35.86
KRH42689	Soybean	cytosol	38.68	35.75
KRH58784	Soybean	nucleus	39.35	35.71
VIT_01s0010g03850.t01	Wine grape	nucleus	38.68	35.64
Solyc05g015650.2.1	Tomato	nucleus	37.22	35.51
KRH31521	Soybean	nucleus	35.99	35.27
Zm00001d003958_P013	Maize	nucleus	38.68	35.24
Zm00001d050702_P001	Maize	cytosol	6.95	35.03
PGSC0003DMT400084738	Potato	cytosol	26.01	33.92
KRG97392	Soybean	nucleus	36.55	33.89
Zm00001d025235_P004	Maize	nucleus	37.78	33.6
GSMUA_Achr8P09270_001	Banana	endoplasmic reticulum, nucleus	42.6	33.6
AT1G67310.1	Thale cress	cytosol	38.23	33.56
Zm00001d002681_P001	Maize	cytosol	12.56	33.53
Solyc12g035520.1.1	Tomato	nucleus	36.44	33.4
Bra034007.1-P	Field mustard	nucleus	37.44	33.0
CDY51184	Canola	nucleus	37.78	32.88
Bra004217.1-P	Field mustard	nucleus	36.66	32.8
CDY07431	Canola	nucleus	35.31	32.64
Bra004096.1-P	Field mustard	nucleus	35.54	32.58
CDY12637	Canola	nucleus	37.56	32.4
CDY28897	Canola	nucleus	35.09	32.07
CDY01799	Canola	nucleus	36.44	31.71
Zm00001d043159_P001	Maize	mitochondrion	6.39	30.81
Zm00001d011907_P001	Maize	mitochondrion	4.04	30.77
Zm00001d020190_P001	Maize	cytosol, mitochondrion	5.61	28.74
Zm00001d039938_P001	Maize	cytosol	8.86	28.52
Zm00001d049671_P001	Maize	mitochondrion	5.72	28.02
Zm00001d028488_P001	Maize	cytosol	8.52	27.84
Zm00001d022185_P003	Maize	nucleus	30.49	25.95
CDX96099	Canola	nucleus	36.55	25.91
Zm00001d023435_P001	Maize	cytosol	9.64	25.67
Zm00001d028007_P004	Maize	nucleus	29.37	25.56
Zm00001d014286_P002	Maize	nucleus	28.92	24.88
Zm00001d030518_P005	Maize	cytosol	28.7	23.42
Zm00001d047209_P003	Maize	nucleus	28.81	23.41
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	23.43	21.59
Zm00001d031632_P034	Maize	plasma membrane	10.54	18.84
Zm00001d016518_P008	Maize	plasma membrane	10.54	18.84
Zm00001d049403_P001	Maize	cytosol	11.77	15.81
Zm00001d048031_P003	Maize	golgi	13.79	13.84
Bra004218.1-P	Field mustard	nucleus	0.22	0.68

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	EntrezGene:100384320	MapMan:15.5.26	Gene3D:2.60.40.10	UniProt:A0A1D6N2S9
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683
InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	ProteinID:ONM35017.1	InterPro:P-loop_NTPase
PFAM:PF00612	PFAM:PF03859	PFAM:PF13637	PFscan:PS50088	PFscan:PS50096	PFscan:PS50297
PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF8	SMART:SM00015	SMART:SM00248	SMART:SM01076
SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI000842C92E	EnsemblPlantsGene:Zm00001d042313	EnsemblPlants:Zm00001d042313_P004
EnsemblPlants:Zm00001d042313_T004	SEG:seg	:	:	:	:

Description

CAMTA-transcription factor 3Calmodulin-binding transcription activator 4

Coordinates

chr3:-:160480671..160486892

Molecular Weight (calculated)

100603.0 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.434

Length

892 amino acids

Sequence
(BLAST)

001: MQQQQQGLDI GKLQEVVKTR WLKPQEVLKI LQNHELFTIS HKPPQKPQSG SWFLFNRRVL RYFRNDGFEW QKKRNGKTIN EAHERLKVDN VDALNCYYAR
101: GDKNPTFQRR IYWMLDPAYE HIVLVHYRDV LEGSISVSAR NDSSTLNQNG SASRAEVHSS PGWTSELIAH CTNSCSPGSA EEVSSQISAS ESDLIQHKAA
201: LRKLKMQLSL EDKEDCDVNA EDVPADNEPI ILPVIQNEEP GTSRNHDDIF DVLDFSEDHI NGTGTHPCHS AIDVLKNSGY MRFLQNQRFL MKVQSLKPES
301: REPNETKKNL SVWTNLCREL QWLGTYENVM QVIIVGDFLC NPPHSSWQVL FGDVKVCVEI IQQGVIRCHT PCLDAGKVRM CLLDGNGKSC SEAREFEFLE
401: KPTKCMIDGN TNPCNEAQDV KLHQIPTKSS EELSLLLHYV HTLFDGHASG LFSNFSLPLQ NLGCGIQSNQ MDVMKKAYKQ LDPENVVSSV MEVLLNDKFK
501: QWLSSKCEQN IDGDHLLPKQ YRNIIHTVAA LGYDLALKPL LSSGVPINYR DANGWTALHW AARFGREDMV VALLTAGAAA GALSHPTSED PAAKTPASIA
601: LAYGFKGLSA FLSEAQLTTH LDSIESKENG KLDSREEGIC RAVDRISDKS SHVHGGTDDQ LALKDSLGAV RNAVQAAGRI QAAFRIFSFK KKKEMALGNR
701: NSCCLSISEA GAVSHDMLEK AVLSIQKNFR CWKKRKEFLK MRNNVVRIQA RVRAHQERNK YKELISSVGI LEKVMIRWYH KGVGLRGFNS GAMTIDEEVD
801: EDVAKVFRKL RVETAIDEAV SRVSCIIGSP KAMHQYRRML NRYQQTKVNI FLLGNLMIRR SNACVKPTVM EQTAKHKPPT IYLSPLLKHK PW

Best Arabidopsis Sequence Match ( AT1G67310.1 )
(BLAST)

0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP

Arabidopsis Description

CAMTA4Calmodulin-binding transcription activator 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.