Factsheet for Bra022188.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92108	Canola	cytosol	99.18	98.83
CDX95894	Canola	cytosol	97.65	97.3
CDY45590	Canola	cytosol	32.47	89.9
AT3G16940.1	Thale cress	nucleus	82.47	82.96
Bra038040.1-P	Field mustard	nucleus	69.65	64.42
GSMUA_Achr5P21200_001	Banana	cytosol	10.59	61.22
TraesCS2B01G254100.1	Wheat	cytosol	9.76	60.14
KRH11981	Soybean	nucleus	57.53	53.68
KRH37009	Soybean	nucleus	57.18	53.35
Solyc12g099340.1.1	Tomato	nucleus	56.94	52.9
KRH50762	Soybean	nucleus	57.29	52.88
PGSC0003DMT400011979	Potato	cytosol	43.41	52.56
KRH02327	Soybean	nucleus	56.82	52.39
VIT_05s0077g01240.t01	Wine grape	cytosol	56.24	51.56
Solyc01g060140.2.1	Tomato	nucleus	40.12	51.12
GSMUA_Achr5P21190_001	Banana	cytosol	31.18	49.81
GSMUA_Achr8P10490_001	Banana	cytosol	45.06	45.7
KXG36244	Sorghum	nucleus	46.59	43.33
TraesCS2D01G237300.2	Wheat	cytosol	45.29	42.45
TraesCS2A01G229400.1	Wheat	nucleus	45.29	42.45
HORVU2Hr1G051690.3	Barley	cytosol	44.94	41.61
Os07t0490200-01	Rice	nucleus	44.71	40.99
TraesCS2B01G254000.2	Wheat	cytosol	34.35	39.14
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	44.12	38.74
Bra038534.1-P	Field mustard	nucleus	31.65	28.92
Bra030248.1-P	Field mustard	nucleus	32.24	26.58
Bra009382.1-P	Field mustard	nucleus	29.18	24.63
Bra037769.1-P	Field mustard	cytosol	29.41	24.32
Bra004217.1-P	Field mustard	nucleus	27.29	23.27
Bra004096.1-P	Field mustard	nucleus	26.59	23.23
Bra034007.1-P	Field mustard	nucleus	26.94	22.63
Bra004218.1-P	Field mustard	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	MapMan:15.5.26	Gene3D:2.60.40.10	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlantsGene:Bra022188	EnsemblPlants:Bra022188.1	EnsemblPlants:Bra022188.1-P	InterPro:CG-1_dom	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009628
GO:GO:0009987	GO:GO:0043565	GO:GO:0070417	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559
InterPro:IPR013783	InterPro:IPR020683	InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set
UniProt:M4E091	InterPro:P-loop_NTPase	PFAM:PF00612	PFAM:PF03859	PFAM:PF12796	PFscan:PS50088
PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF3	SMART:SM00015
SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF52540	SUPFAM:SSF81296	UniParc:UPI0002547721
SEG:seg	:	:	:	:	:

Description

AT3G16940 (E=0.0) | calmodulin-binding protein

Coordinates

chrA05:-:19207338..19211720

Molecular Weight (calculated)

96763.5 Da

IEP (calculated)

7.036

GRAVY (calculated)

-0.533

Length

850 amino acids

Sequence
(BLAST)

001: MDGDGSSGRL IGSEIHGFHT LQDLDVQTML EEARSRWLRP NEIHAVLSNP KYFTINVKPV NLPTSGRIIL FDRKMLRNFR KDGHNWKKKK DGRTVKEAHE
101: HLKVGDEERI HVYYAHGEDN TTFVRRCYWL LDKARENIVL VHYRDTQEAA TTSGDSNSHS SSNLVAVEDI DFNPDDSLYL GINNTPVVKT HETRLHDINT
201: LDWDELLVQS DLDNQSAPIV DDMSYFTEHL QNATKDTAEH LTVADESLDA LLNNGPQSRE NFGRWMNSFI GDPNGSLEDP SFEAMVTLDQ NPLAPQATFH
301: PHSDLPQQVF NITEVSPAWA YSSEKTKIVV TGILHNSYQH LGSSNLFCIC GDSCVPAEYV QAGVYRCFIP PHSPGMANLY LSADGHEPIS QCFTFEHRPA
401: PVSAKPVHEN DQESKWEEFE LQVRLAHLLF TSSNKLNVLS SNISPENFLD AKKLSNKTSH LLNSWAYLIK SVQGSKVSFD QAKDQIFELT LKNRIKEWLM
501: EKVLEGRNAR DYDSKGLGVI HLCAILGYTW SIQLFSLSGL SLDFRDKQGW TALHWAAYYG REKMVAALLT AGAKPNLVTD SRKDNLGGCT PADLAQQNGF
601: DGIAAYLAEK CLVAQFVAMK LAGNISGTLE TCKGEMSNQG PLPDDEQNLK DALAAYRTAA EAAARIQGAF REKALKAARS KVIQFENKEE EAKSIIAAMK
701: IQNAFRKYDT RRKIEAAYRI QCRFQTWKMR REFLNMRRQA IRIQAAFRGL QARKQYRKIL WSVGVLEKAI IRWRQKRKLF IGLQVSEAEA EEKAEEDFYK
801: ASQKQAEERL ERSVVRVQAM FRSKKAQEDY RRMKLTHEET QLEYEFLHDV

Best Arabidopsis Sequence Match ( AT3G16940.1 )
(BLAST)

001: MDGDGLGRLI GSEIHGFHTL QDLDVQTMLE EAKSRWLRPN EIHAILYNPK YFTINVKPVN LPNSGRIILF DRKMLRNFRK DGHNWKKKKD GRTVKEAHEH
101: LKVGNEERIH VYYAHGEDNT TFVRRCYWLL DKARENIVLV HYRDTQEAAT TSGDSISSPI SVSEQTFPNR VAAEDIDTVV RNHDISLHDI NTLDWDELLV
201: PTDLNNQSAP TVDNLSYFTE PLQNAANGTA EHGNATVADG SLDALLNDGP QSRESFGRWM NSFISESNGS LEDPSFEPMV MPRQDPLAPQ AVFHSHSNIP
301: EQVFNITDVS PAWAYSSEKT KILVTGFLHD SYQHLERSNL YCVCGDFCVP AEYLQAGVYR CIIPPHSPGM VNLYLSADGH KPISQCFRFE HRAVPVLDKT
401: VPEDNQDSKW EEFEFQVRLS HLLFTSSNKL NVLSSKISPH NLRDAKKLAS KTNHLLNSWA YLVKSIQGNK VSFDQAKDHL FELSLKNRLK EWLMEKVLEG
501: RNTLDYDSKG LGVIHLCASL GYTWSVQLFS LSGLSLNFRD KQGWTALHWA AYYGREKMVA ALLSAGARPN LVTDSTKDNL GGCMAADLAQ QNGYDGLAAY
601: LAEKCLVAQF RDMKIAGNIT GDLEACKAEM LNQGTLPEDE QSLKDALAAY RTAAEAAARI QGAFREKALK AARSSVIQFA NKEEEAKSII AAMKIQNAFR
701: KYDTRRKIEA AYRIQCRFQT WKIRREYLNM RRQAIRIQAA FRGLQARRQY KKILWSVGVL EKAVLRWRQK RKGFRGLQVA AEEDSPGEAQ EDFYKTSQRQ
801: AEERLERSVV RVQAMFRSKK AQQDYRRMKL THEEAQLEYG CLEDI

Arabidopsis Description

calmodulin binding;transcription regulators [Source:TAIR;Acc:AT3G16940]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.