CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11981	Soybean	nucleus	91.99	91.99
KRH50762	Soybean	nucleus	73.66	72.86
KRH02327	Soybean	nucleus	72.12	71.26
VIT_05s0077g01240.t01	Wine grape	cytosol	63.01	61.92
GSMUA_Achr5P21200_001	Banana	cytosol	9.99	61.9
TraesCS2B01G254100.1	Wheat	cytosol	9.11	60.14
Solyc12g099340.1.1	Tomato	nucleus	59.82	59.56
CDY45590	Canola	cytosol	19.98	59.28
Solyc01g060140.2.1	Tomato	nucleus	42.81	58.47
AT3G16940.1	Thale cress	nucleus	54.12	58.34
PGSC0003DMT400011979	Potato	cytosol	44.9	58.26
CDY69566	Canola	nucleus	17.45	58.24
CDX92108	Canola	cytosol	53.57	57.21
Bra022188.1-P	Field mustard	cytosol	53.35	57.18
CDX95894	Canola	cytosol	53.35	56.98
CDY58036	Canola	nucleus	57.19	56.69
CDY22778	Canola	nucleus	57.19	56.69
Bra038040.1-P	Field mustard	nucleus	57.19	56.69
GSMUA_Achr5P21190_001	Banana	cytosol	30.52	52.26
GSMUA_Achr8P10490_001	Banana	cytosol	44.35	48.21
KXG36244	Sorghum	nucleus	46.21	46.06
TraesCS2D01G237300.2	Wheat	cytosol	44.79	44.98
TraesCS2A01G229400.1	Wheat	nucleus	44.79	44.98
Os07t0490200-01	Rice	nucleus	45.44	44.66
HORVU2Hr1G051690.3	Barley	cytosol	44.9	44.55
TraesCS2B01G254000.2	Wheat	cytosol	34.69	42.36
Zm00001d021516_P003	Maize	cytosol, nucleus, plasma membrane	44.13	41.53
KRH15615	Soybean	cytosol	12.18	35.02
KRH58784	Soybean	nucleus	31.83	29.5
KRH42689	Soybean	cytosol	31.06	29.33
KRH31521	Soybean	nucleus	29.09	29.12
KRG97392	Soybean	nucleus	30.41	28.79
KRH02436	Soybean	nucleus	30.19	27.53
KRH42152	Soybean	nucleus	31.5	26.6
KRH58270	Soybean	nucleus	31.5	26.38
KRH10541	Soybean	nucleus	30.95	25.92
KRH43898	Soybean	nucleus	30.41	25.62
KRH43177	Soybean	nucleus	30.85	25.5
KRH59333	Soybean	nucleus	31.39	25.49

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.25.40.20	EntrezGene:100776839	MapMan:15.5.26	Gene3D:2.60.40.10	EMBL:ACUP02005407
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:CG-1_dom	EnsemblPlantsGene:GLYMA_09G038300	GO:GO:0001077
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006366
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0045944
UniProt:I1L0T3	InterPro:IPR000048	InterPro:IPR002110	InterPro:IPR005559	InterPro:IPR013783	InterPro:IPR020683
InterPro:IPR036770	InterPro:IQ_motif_EF-hand-BS	InterPro:Ig-like_fold	InterPro:Ig_E-set	EnsemblPlants:KRH37009	ProteinID:KRH37009
ProteinID:KRH37009.1	ProteinID:KRH37010.1	PFAM:PF00612	PFAM:PF03859	PFAM:PF12796	PFscan:PS50088
PFscan:PS50096	PFscan:PS50297	PFscan:PS51437	PANTHER:PTHR23335	PANTHER:PTHR23335:SF3	SMART:SM00015
SMART:SM00248	SMART:SM01076	SUPFAM:SSF48403	SUPFAM:SSF81296	UniParc:UPI000295571C	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:3199750..3210082

Molecular Weight (calculated)

102975.0 Da

IEP (calculated)

7.019

GRAVY (calculated)

-0.420

Length

911 amino acids

Sequence
(BLAST)

001: MMMSHNLTGQ LVGAEIHGFH TLDDLDVSNT MEEAKSRWLR PNEIHAILCN HKYFKINAKP VNLPKSGTIV LFDRKMLRNF RKDGHNWKKK TDGKTVKEAH
101: EHLKVGNEER IHVYYAHGQD KPTFVRRCYW LLDKSLEHIV LVHYRDTQEL QLQGSPATPV NSNSSSVSDS AASWIPSDDL DSGVNSAYAV ELNDSLTAKS
201: HEQRLHEINT LEWDDLVVSN ANTSTTSNGG NVPYSFQQNQ SLLNGSFGNV SSDPSAEIPS FGNLTQLVSG SDSAPYSFPE SADLLKSSPL SSGGVDTLGT
301: LVNEGLQSQD SFGTWMNIMS DTPCSIDESA LEATTSSVHV PYSSLVADNK QSSLPEQVFN LTEVSPVWAS STEKTKVLVT GYFHNNYQHL AKSNLLCVCG
401: DVSVPVEIVQ VGVYRCWVSP HSPGLVTLYL SFDGHKPISQ VVNFEYRTPI LHEPTALIEE KYNWDEFRLQ MRLAHLLFAS DKSLNIFSSK VSTNALKEAR
501: RFSFKTSYIS KSWQHLMKSI DDKTIPFSQV KDALFETSLK NKLKEWLLER IILGSKSTEY DAQGQAAIHL CAMLGYNWAI SLFTWSGLSL DFRDKFGWTA
601: LHWAAYYGIE KMVATLLSCG ARPNLVTDPT PQYPGGCTAA DLAYVKGCDG LAAYLSEKSL VEQFNDMSLA GNISGSLETS STDPVNAANL TEDQLYLKET
701: LEAYRTAAEA AARIQAAFRE HSFKLRYQAV EIMSPEEEAR QIVAAMRIQH AFRNYESKKK MAAAARIQLR FRTWKYRREF LNMRRQAIKI QAAFRGFQAR
801: KQYRKIVWSV GVLEKVILRW LLKRKGFRGL QVNPAEEETQ ESDTIAEEDF FRTSRKQAEE RVERSVIRVQ AMFRSKKAQE EYRRMKLTHN QAMLDELEEF
901: LNSEDDMLPK T

Best Arabidopsis Sequence Match ( AT3G16940.1 )
(BLAST)

001: MDGDGLGRLI GSEIHGFHTL QDLDVQTMLE EAKSRWLRPN EIHAILYNPK YFTINVKPVN LPNSGRIILF DRKMLRNFRK DGHNWKKKKD GRTVKEAHEH
101: LKVGNEERIH VYYAHGEDNT TFVRRCYWLL DKARENIVLV HYRDTQEAAT TSGDSISSPI SVSEQTFPNR VAAEDIDTVV RNHDISLHDI NTLDWDELLV
201: PTDLNNQSAP TVDNLSYFTE PLQNAANGTA EHGNATVADG SLDALLNDGP QSRESFGRWM NSFISESNGS LEDPSFEPMV MPRQDPLAPQ AVFHSHSNIP
301: EQVFNITDVS PAWAYSSEKT KILVTGFLHD SYQHLERSNL YCVCGDFCVP AEYLQAGVYR CIIPPHSPGM VNLYLSADGH KPISQCFRFE HRAVPVLDKT
401: VPEDNQDSKW EEFEFQVRLS HLLFTSSNKL NVLSSKISPH NLRDAKKLAS KTNHLLNSWA YLVKSIQGNK VSFDQAKDHL FELSLKNRLK EWLMEKVLEG
501: RNTLDYDSKG LGVIHLCASL GYTWSVQLFS LSGLSLNFRD KQGWTALHWA AYYGREKMVA ALLSAGARPN LVTDSTKDNL GGCMAADLAQ QNGYDGLAAY
601: LAEKCLVAQF RDMKIAGNIT GDLEACKAEM LNQGTLPEDE QSLKDALAAY RTAAEAAARI QGAFREKALK AARSSVIQFA NKEEEAKSII AAMKIQNAFR
701: KYDTRRKIEA AYRIQCRFQT WKIRREYLNM RRQAIRIQAA FRGLQARRQY KKILWSVGVL EKAVLRWRQK RKGFRGLQVA AEEDSPGEAQ EDFYKTSQRQ
801: AEERLERSVV RVQAMFRSKK AQQDYRRMKL THEEAQLEYG CLEDI

Arabidopsis Description

calmodulin binding;transcription regulators [Source:TAIR;Acc:AT3G16940]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.