Factsheet for Bra019183.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11061	Canola	nucleus	84.43	84.66
Bra013873.1-P	Field mustard	nucleus	64.48	65.92
AT4G25210.1	Thale cress	nucleus	45.36	45.11
AT4G00130.1	Thale cress	mitochondrion	19.4	36.6
Bra031402.1-P	Field mustard	nucleus	24.59	27.11
Bra021317.1-P	Field mustard	nucleus	22.68	26.95
Bra027078.1-P	Field mustard	nucleus	26.23	25.26
Bra034488.1-P	Field mustard	nucleus	21.86	24.84
Bra032717.1-P	Field mustard	nucleus	22.13	24.4
Bra025445.1-P	Field mustard	nucleus	19.4	23.13
Bra019847.1-P	Field mustard	nucleus	21.86	22.47
KRH10688	Soybean	nucleus	26.78	22.43
KRH57853	Soybean	nucleus	22.13	20.93
KRH21647	Soybean	nucleus	24.86	20.31
PGSC0003DMT400079215	Potato	nucleus	20.22	18.55
GSMUA_AchrUn_...	Banana	nucleus	20.77	18.45
Bra040416.1-P	Field mustard	nucleus	19.13	16.47
Bra009986.1-P	Field mustard	nucleus	18.31	16.18
Bra038583.1-P	Field mustard	nucleus	17.21	15.04
Bra040116.1-P	Field mustard	nucleus	14.75	14.56
Os09t0451700-00	Rice	nucleus	6.83	13.89
KXG25358	Sorghum	nucleus, plastid	15.85	13.33
EER96833	Sorghum	nucleus	15.85	13.12
Bra036116.1-P	Field mustard	nucleus	12.57	12.85
Zm00001d020688_P001	Maize	nucleus	14.48	12.38
Zm00001d005865_P001	Maize	nucleus	14.75	12.33
Zm00001d049991_P001	Maize	nucleus, plastid	14.75	11.84
TraesCS5B01G233000.1	Wheat	nucleus	13.93	10.43
TraesCS5D01G241400.1	Wheat	nucleus	13.39	10.0
HORVU5Hr1G067630.1	Barley	nucleus	12.84	9.59
TraesCS5A01G234500.1	Wheat	nucleus	12.84	9.59
Os08t0467600-00	Rice	nucleus	13.11	9.02
VIT_00s0999g00010.t01	Wine grape	cytosol, nucleus	4.64	2.81

Protein Annotations

EnsemblPlants:Bra019183.1	EnsemblPlants:Bra019183.1-P	EnsemblPlantsGene:Bra019183	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:GEBP	ncoils:Coil	PANTHER:PTHR31662
PANTHER:PTHR31662:SF1	PFAM:PF04504	SEG:seg	UniParc:UPI00025410C3	UniProt:M4DRP0	MapMan:15.5.28

Description

AT4G25210 (E=3e-074) | transcription regulator

Coordinates

chrA03:+:25822483..25823583

Molecular Weight (calculated)

40529.6 Da

IEP (calculated)

5.516

GRAVY (calculated)

-0.924

Length

366 amino acids

Sequence
(BLAST)

001: MAPKDKIANP PVASSSEEEE EEEEESGSSV EESNSSDDEA GDVQSKLTQK PVAPPPAAKK PESDSEEESE SDSDSEPATK TKPLNAVVTK PIPPESSTAK
101: RSLKQADNEP KKKAKTSTTT EQAKKKPSGA DEEVKKISGE EAKKMFQRLF SETDEIAMLQ GFLDFTSTKG DPSENMDAFC DYVKTLIDFN ASKAQIVTKL
201: QRCKKKFVNI VKNSLKRGKT EDQITYAKDL EQRTFELSRK IWGSDGVLPA KPRKKSKEVE VVSTPKKKAE VETQKKVSVV ENHHLSESRE MALFFKAENG
301: SVLGLDESSV SGVWDMVEDG PKKREMEEKL KKLKAKQMEL CLQRTALVDY TAKMIFKNNA SSSSSC

Best Arabidopsis Sequence Match ( AT4G25210.1 )
(BLAST)

001: MAPKKAEEVV ESPPVSSEEE ESGSSGEESE SSAEVPKKVE SSQKPESDSE GESESESSSG PEPESEPAKT IKLKPVGTKP IPETSGSAAT VPESSTAKRP
101: LKEAAPEAIK KQKTSDTEHV KKPITNDEVK KISSEDAKKM FQRLFSETDE IALLQGIIDF TSTKGDPYED IDAFCIYVKK LIDFDATKNQ IVTKLQRLKK
201: KFNNAVKNSL KKGKTEDDIE FAKDLEQKGF ELSRKIWGSN GVLVTGKSSR KKVGGTPAPK EMKLVAHSTP KKQQEEAKKP ERTEAKVVNT GLSIGKEIAS
301: FLNADNGSSC GLDESTLTAV WAKVADGAEK REVEEKWKKL KAKQFELCLQ RSGLVNETAK MIFKAYES

Arabidopsis Description

GEBPLGLABROUS1 enhancer-binding protein-like [Source:UniProtKB/Swiss-Prot;Acc:Q9SB42]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.