Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68986 | Canola | nucleus | 56.42 | 59.59 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 7.54 | 43.55 |
| Bra009986.1-P | Field mustard | nucleus | 50.0 | 43.24 |
| AT5G28040.2 | Thale cress | nucleus | 47.77 | 40.05 |
| Bra040416.1-P | Field mustard | nucleus | 46.93 | 39.53 |
| Bra040116.1-P | Field mustard | nucleus | 39.66 | 38.27 |
| Zm00001d040254_P001 | Maize | nucleus | 24.86 | 22.31 |
| Zm00001d006945_P001 | Maize | nucleus | 21.51 | 20.87 |
| Zm00001d022266_P001 | Maize | nucleus | 21.51 | 20.59 |
| EES02686 | Sorghum | nucleus | 22.91 | 20.3 |
| EES02423 | Sorghum | nucleus | 22.63 | 19.95 |
| KRG92748 | Soybean | cytosol | 19.55 | 19.61 |
| TraesCS3D01G176400.1 | Wheat | nucleus | 21.79 | 19.6 |
| HORVU2Hr1G027390.1 | Barley | plastid | 20.39 | 19.52 |
| TraesCS3B01G200500.1 | Wheat | nucleus | 20.39 | 19.41 |
| TraesCS2A01G151700.1 | Wheat | nucleus | 20.11 | 19.05 |
| EER97613 | Sorghum | nucleus | 19.83 | 18.93 |
| HORVU5Hr1G051570.1 | Barley | plastid | 18.16 | 18.9 |
| TraesCS3A01G165200.1 | Wheat | nucleus | 20.67 | 18.59 |
| TraesCS2B01G176900.1 | Wheat | nucleus | 19.55 | 18.57 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 22.35 | 18.56 |
| TraesCS2D01G156800.1 | Wheat | nucleus | 19.55 | 18.52 |
| KRH34056 | Soybean | nucleus | 19.27 | 18.4 |
| HORVU3Hr1G034150.3 | Barley | nucleus | 20.67 | 18.32 |
| TraesCS4B01G159600.1 | Wheat | nucleus | 17.6 | 18.16 |
| TraesCS4A01G138100.1 | Wheat | nucleus | 17.32 | 17.82 |
| EER92218 | Sorghum | nucleus | 18.44 | 17.51 |
| Os01t0249900-01 | Rice | plastid | 15.08 | 17.31 |
| TraesCS4D01G163600.1 | Wheat | nucleus | 16.76 | 17.29 |
| HORVU4Hr1G045570.1 | Barley | nucleus | 16.76 | 17.24 |
| Os03t0370250-01 | Rice | cytosol | 19.55 | 16.95 |
| Os07t0636100-01 | Rice | nucleus | 10.89 | 15.54 |
| Zm00001d047421_P001 | Maize | nucleus | 16.2 | 15.47 |
| Zm00001d029287_P001 | Maize | nucleus | 16.48 | 15.4 |
| Bra013873.1-P | Field mustard | nucleus | 15.08 | 15.08 |
| GSMUA_Achr10P... | Banana | mitochondrion | 16.48 | 13.95 |
| Bra019183.1-P | Field mustard | nucleus | 12.85 | 12.57 |
| Bra025445.1-P | Field mustard | nucleus | 10.61 | 12.38 |
| Bra027078.1-P | Field mustard | nucleus | 12.85 | 12.11 |
| Bra031402.1-P | Field mustard | nucleus | 9.78 | 10.54 |
| Bra034488.1-P | Field mustard | nucleus | 9.22 | 10.25 |
| Bra021317.1-P | Field mustard | nucleus | 8.66 | 10.06 |
| Bra032717.1-P | Field mustard | nucleus | 9.22 | 9.94 |
| Bra038583.1-P | Field mustard | nucleus | 11.45 | 9.79 |
| Bra019847.1-P | Field mustard | nucleus | 9.5 | 9.55 |
Protein Annotations
Description
AT5G28040 (E=3e-037) | transcription regulator
Coordinates
chrA09:+:2641324..2642491
Molecular Weight (calculated)
38402.8 Da
IEP (calculated)
4.421
GRAVY (calculated)
-0.570
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSDERDAVE SPELEENGSA GGGGVAGESD SDDDQHVMPE PDVAAADELN SPLLSATAED TVTVALPSGS SLPAAAIPVD SDPKRRRATE IIHLRPPPPP
101: PIDDSRRLFQ RLGTDEDEIE LLRGFLDYVY VTWRQHQLAS PRYGAVLRAD QVQTPARVQQ EPARGEASSA EEEIWNQTGK IIGFEDNNVI DLEEQPSSTN
201: VDVDSDNVLE KKGTVSRKRS RSRIGRIDED NKPISLSDGP TASGAGANEN VAAFGDGRSL GGLIEETVKN CVSPLIKEMM MAAAGGYPGG GGHGMGVLSP
301: MLMAKIGFGG GGGKGGVGDE RWRRQQILEL EVYSRRLELV QEQIRATLHE LKTMPSGR
101: PIDDSRRLFQ RLGTDEDEIE LLRGFLDYVY VTWRQHQLAS PRYGAVLRAD QVQTPARVQQ EPARGEASSA EEEIWNQTGK IIGFEDNNVI DLEEQPSSTN
201: VDVDSDNVLE KKGTVSRKRS RSRIGRIDED NKPISLSDGP TASGAGANEN VAAFGDGRSL GGLIEETVKN CVSPLIKEMM MAAAGGYPGG GGHGMGVLSP
301: MLMAKIGFGG GGGKGGVGDE RWRRQQILEL EVYSRRLELV QEQIRATLHE LKTMPSGR
001: MASDQRDTDF SAESPDLEED GGGGGGGRGG GETESDEDVV IPEPNEAEDD DHDPDPDPEY EDLNSPSMIS RAPATKSSSG TVTVALPAGS AVPVASIPSD
101: SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK
201: EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG
301: VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE
401: VYSRRLELVQ EQIRATVNEL KTMPNGG
101: SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK
201: EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG
301: VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE
401: VYSRRLELVQ EQIRATVNEL KTMPNGG
Arabidopsis Description
Probable transcription factor At5g28040 [Source:UniProtKB/Swiss-Prot;Acc:F4K5T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.