Factsheet for GSMUA_Achr8P22220_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0030g01600.t01	Wine grape	cytosol, mitochondrion	6.73	46.77
GSMUA_Achr10P...	Banana	mitochondrion	40.6	41.37
TraesCS3B01G200500.1	Wheat	nucleus	32.48	37.23
GSMUA_Achr7P02150_001	Banana	cytosol	9.05	36.45
TraesCS3D01G176400.1	Wheat	nucleus	33.18	35.93
Zm00001d040254_P001	Maize	nucleus	33.18	35.84
HORVU5Hr1G051570.1	Barley	plastid	28.54	35.76
TraesCS4B01G159600.1	Wheat	nucleus	28.07	34.87
EES02686	Sorghum	nucleus	32.25	34.41
TraesCS4D01G163600.1	Wheat	nucleus	27.61	34.29
KRG92750	Soybean	nucleus	27.61	33.71
HORVU3Hr1G034150.3	Barley	nucleus	31.55	33.66
TraesCS3A01G165200.1	Wheat	nucleus	30.86	33.42
TraesCS4A01G138100.1	Wheat	nucleus	26.91	33.33
HORVU4Hr1G045570.1	Barley	nucleus	26.91	33.33
EES02423	Sorghum	nucleus	31.32	33.25
Zm00001d022266_P001	Maize	nucleus	28.07	32.35
CDY21105	Canola	nucleus	26.68	32.3
KRH68705	Soybean	nucleus	30.16	32.1
KRH34055	Soybean	nucleus	27.38	31.72
Zm00001d006945_P001	Maize	nucleus	27.15	31.71
Os07t0636100-01	Rice	nucleus	18.33	31.47
EER97613	Sorghum	nucleus	27.38	31.47
TraesCS2A01G151700.1	Wheat	nucleus	27.38	31.22
HORVU2Hr1G027390.1	Barley	plastid	26.91	31.02
KRG96940	Soybean	nucleus	29.0	30.94
TraesCS2D01G156800.1	Wheat	nucleus	26.91	30.69
Os01t0249900-01	Rice	plastid	22.04	30.45
CDY00009	Canola	nucleus	27.38	29.95
TraesCS2B01G176900.1	Wheat	nucleus	25.99	29.71
EER92218	Sorghum	nucleus	25.99	29.71
CDY50767	Canola	nucleus	27.84	29.63
Zm00001d047421_P001	Maize	nucleus	25.75	29.6
CDX80681	Canola	nucleus	27.84	29.2
PGSC0003DMT400009206	Potato	nucleus	28.07	28.81
AT5G28040.2	Thale cress	nucleus	28.54	28.81
CDY30023	Canola	nucleus	26.91	28.78
Bra009986.1-P	Field mustard	nucleus	27.38	28.5
Bra040416.1-P	Field mustard	nucleus	27.84	28.24
Zm00001d029287_P001	Maize	nucleus	25.06	28.2
CDY41910	Canola	nucleus	27.61	28.0
Solyc02g083750.1.1	Tomato	nucleus	27.15	27.79
Os03t0370250-01	Rice	cytosol	25.52	26.63
PGSC0003DMT400057863	Potato	nucleus	27.38	26.4
AT3G04930.1	Thale cress	nucleus	27.61	26.1
Bra040116.1-P	Field mustard	nucleus	22.27	25.88
Solyc01g097890.2.1	Tomato	nucleus	26.68	25.39
KRG92748	Soybean	cytosol	18.79	22.69
Bra036116.1-P	Field mustard	nucleus	18.56	22.35
CDY68986	Canola	nucleus	17.17	21.83
CDX86188	Canola	cytosol	27.38	19.6
KRH34056	Soybean	nucleus	16.71	19.2
GSMUA_AchrUn_...	Banana	nucleus	15.31	16.02

Protein Annotations

EnsemblPlants:GSMUA_Achr8P22220_001	EnsemblPlants:GSMUA_Achr8T22220_001	EnsemblPlantsGene:GSMUA_Achr8G22220_001	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:GEBP	ncoils:Coil	PANTHER:PTHR31662
PANTHER:PTHR31662:SF6	PFAM:PF04504	SEG:seg	UniParc:UPI000294DA78	UniProt:M0TSM5	MapMan:15.5.28

Description

transcription regulator, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G22220_001]

Coordinates

chr8:-:26876438..26877890

Molecular Weight (calculated)

46988.6 Da

IEP (calculated)

4.702

GRAVY (calculated)

-0.482

Length

431 amino acids

Sequence
(BLAST)

001: MPTAEEAEQE RAVFDDEDDV SSDSDDSDDD EGEATAPPPS LQPQAAPTAV FSEAVSDLNP SAPSHDAANP NPNPNPSPTF SDASACAPPQ NGAIPVQVLP
101: VAPASAPSFD AALFTPSSTS IHVSAPVSSA SEERRSLSVV AFDDSRRLFQ RLWTDEEEIK ILQEFFEFTS RRGTTFASHQ YDTGPFYEEI KKQFQFEFTK
201: NQLIEKLRRL KKKYRNCVGR MRSVGKDFAF KSAHERAIYD IARKIWSAST KRDYESDDED LNTPSNTISN EIITVPINDG SLSCDRKMSR SRRRLRRRMA
301: EEAAATDAAA AAVGGVVVDN SSTVLHTPLA LESGIPDIIK ETVKNCLSPL FKELINSAAG GMLGPGLNSG ASPLSLLPLS LGGGSSAAPG IAVDDKWRKQ
401: QILELEVYLK RIELVREHIN STLEELKSAR S

Best Arabidopsis Sequence Match ( AT3G04930.1 )
(BLAST)

001: MTSDHRDALF SLELESPDPD EGGVADGGES DTDEDLRDND DVVMPGTNEA EAEDDDPEEE DLNSPSTSSL PMVSTISATA VVSGTPTATS STGAVTVALP
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI

Arabidopsis Description

Probable transcription factor At3g04930 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.