Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G176400.1 | Wheat | nucleus | 81.66 | 81.66 |
| TraesCS3B01G200500.1 | Wheat | nucleus | 76.63 | 81.12 |
| HORVU5Hr1G051570.1 | Barley | plastid | 69.35 | 80.23 |
| HORVU3Hr1G034150.3 | Barley | nucleus | 77.39 | 76.24 |
| EES02686 | Sorghum | nucleus | 58.04 | 57.18 |
| EES02423 | Sorghum | nucleus | 55.78 | 54.68 |
| Zm00001d040254_P001 | Maize | nucleus | 53.77 | 53.63 |
| Os01t0249900-01 | Rice | plastid | 39.7 | 50.64 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 7.54 | 48.39 |
| TraesCS4A01G138100.1 | Wheat | nucleus | 32.16 | 36.78 |
| TraesCS2A01G151700.1 | Wheat | nucleus | 32.91 | 34.66 |
| KRG92750 | Soybean | nucleus | 29.15 | 32.86 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 33.42 | 30.86 |
| KRH34055 | Soybean | nucleus | 27.89 | 29.84 |
| KRG96940 | Soybean | nucleus | 29.65 | 29.21 |
| KRH68705 | Soybean | nucleus | 29.65 | 29.14 |
| CDY00009 | Canola | nucleus | 28.64 | 28.93 |
| CDY21105 | Canola | nucleus | 25.88 | 28.93 |
| PGSC0003DMT400009206 | Potato | nucleus | 28.89 | 27.38 |
| GSMUA_Achr10P... | Banana | mitochondrion | 28.89 | 27.19 |
| Solyc02g083750.1.1 | Tomato | nucleus | 28.39 | 26.84 |
| CDX80681 | Canola | nucleus | 27.64 | 26.76 |
| Bra009986.1-P | Field mustard | nucleus | 27.14 | 26.09 |
| CDY30023 | Canola | nucleus | 26.13 | 25.81 |
| PGSC0003DMT400057863 | Potato | nucleus | 28.64 | 25.5 |
| CDY50767 | Canola | nucleus | 25.88 | 25.43 |
| CDY41910 | Canola | nucleus | 26.88 | 25.18 |
| AT5G28040.2 | Thale cress | nucleus | 26.13 | 24.36 |
| Bra040416.1-P | Field mustard | nucleus | 25.88 | 24.24 |
| KRG92748 | Soybean | cytosol | 21.61 | 24.09 |
| AT3G04930.1 | Thale cress | nucleus | 27.39 | 23.9 |
| Solyc01g097890.2.1 | Tomato | nucleus | 26.88 | 23.62 |
| Bra040116.1-P | Field mustard | nucleus | 21.11 | 22.64 |
| KRH34056 | Soybean | nucleus | 20.1 | 21.33 |
| CDY68986 | Canola | nucleus | 17.84 | 20.94 |
| Bra036116.1-P | Field mustard | nucleus | 18.59 | 20.67 |
| CDX86188 | Canola | cytosol | 26.88 | 17.77 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 17.09 | 13.88 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G165200.1 | EnsemblPlantsGene:TraesCS3A01G165200 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | ncoils:Coil | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF14 |
| PFAM:PF04504 | SEG:seg | MapMan:15.5.28 | : | : | : |
Description
No Description!
Coordinates
chr3A:+:170388409..170389605
Molecular Weight (calculated)
41680.8 Da
IEP (calculated)
5.179
GRAVY (calculated)
-0.391
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAAPSRSR SSSSADQDEE GTDSDASNDS PPPAAQQAPP PPFPDSSAPP PPAPAFTDPA GAGAAPPPPP QGASAAEDSR RLFQRLWTDE EELLILRGFL
101: EFTSRRGTAF ASHQYDTGPF YEEIRRKLSF DFSKNQLIEK LRRLKKKYRV CATRVAAQGA AFAFKSAHEG AIYDVARHIW RPAFKRDGAG GDASDEDDIN
201: PAAAAAAAAA AAVTEPPAAV EEGGGGGASA HTPRGRGPRR GGRKRAAQEI EAPIFPATPA PMLTDAAHEP AITAFESSVP VIAQPPPVPA APLPPYPVTA
301: NGPTEADVRS ILSPLLKELI SSVAVPGQTG LGLGLGMEFG GADILGAGLG VAGLSPRAPG DEKWRQQQIL ELEVYLKRLE LVREQVMTAL QELRSSGS
101: EFTSRRGTAF ASHQYDTGPF YEEIRRKLSF DFSKNQLIEK LRRLKKKYRV CATRVAAQGA AFAFKSAHEG AIYDVARHIW RPAFKRDGAG GDASDEDDIN
201: PAAAAAAAAA AAVTEPPAAV EEGGGGGASA HTPRGRGPRR GGRKRAAQEI EAPIFPATPA PMLTDAAHEP AITAFESSVP VIAQPPPVPA APLPPYPVTA
301: NGPTEADVRS ILSPLLKELI SSVAVPGQTG LGLGLGMEFG GADILGAGLG VAGLSPRAPG DEKWRQQQIL ELEVYLKRLE LVREQVMTAL QELRSSGS
001: MTSDHRDALF SLELESPDPD EGGVADGGES DTDEDLRDND DVVMPGTNEA EAEDDDPEEE DLNSPSTSSL PMVSTISATA VVSGTPTATS STGAVTVALP
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI
Arabidopsis Description
Probable transcription factor At3g04930 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.