Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96940 | Soybean | nucleus | 81.23 | 81.44 |
| KRG92750 | Soybean | nucleus | 46.67 | 53.54 |
| KRH34055 | Soybean | nucleus | 43.21 | 47.04 |
| PGSC0003DMT400009206 | Potato | nucleus | 40.99 | 39.52 |
| Solyc02g083750.1.1 | Tomato | nucleus | 40.0 | 38.48 |
| PGSC0003DMT400057863 | Potato | nucleus | 36.79 | 33.33 |
| Solyc01g097890.2.1 | Tomato | nucleus | 36.3 | 32.45 |
| HORVU5Hr1G051570.1 | Barley | plastid | 26.42 | 31.1 |
| TraesCS3B01G200500.1 | Wheat | nucleus | 28.64 | 30.85 |
| TraesCS4B01G159600.1 | Wheat | nucleus | 26.17 | 30.55 |
| TraesCS4D01G163600.1 | Wheat | nucleus | 25.93 | 30.26 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 32.1 | 30.16 |
| Zm00001d022266_P001 | Maize | nucleus | 27.65 | 29.95 |
| TraesCS3D01G176400.1 | Wheat | nucleus | 29.38 | 29.9 |
| TraesCS4A01G138100.1 | Wheat | nucleus | 25.68 | 29.89 |
| EER97613 | Sorghum | nucleus | 27.65 | 29.87 |
| EES02686 | Sorghum | nucleus | 29.63 | 29.7 |
| TraesCS3A01G165200.1 | Wheat | nucleus | 29.14 | 29.65 |
| TraesCS2A01G151700.1 | Wheat | nucleus | 27.65 | 29.63 |
| Os07t0636100-01 | Rice | nucleus | 18.27 | 29.48 |
| TraesCS2D01G156800.1 | Wheat | nucleus | 27.41 | 29.37 |
| HORVU4Hr1G045570.1 | Barley | nucleus | 25.19 | 29.31 |
| Zm00001d006945_P001 | Maize | nucleus | 26.67 | 29.27 |
| EES02423 | Sorghum | nucleus | 29.14 | 29.06 |
| HORVU2Hr1G027390.1 | Barley | plastid | 26.67 | 28.88 |
| Zm00001d040254_P001 | Maize | nucleus | 28.4 | 28.82 |
| TraesCS2B01G176900.1 | Wheat | nucleus | 26.67 | 28.65 |
| KRG92748 | Soybean | cytosol | 25.19 | 28.57 |
| HORVU3Hr1G034150.3 | Barley | nucleus | 28.4 | 28.47 |
| EER92218 | Sorghum | nucleus | 26.17 | 28.12 |
| Os01t0249900-01 | Rice | plastid | 21.23 | 27.56 |
| Zm00001d047421_P001 | Maize | nucleus | 25.43 | 27.47 |
| KRH34056 | Soybean | nucleus | 24.44 | 26.4 |
| Zm00001d029287_P001 | Maize | nucleus | 23.95 | 25.33 |
| Os03t0370250-01 | Rice | cytosol | 24.69 | 24.21 |
| GSMUA_Achr10P... | Banana | mitochondrion | 24.44 | 23.4 |
| KRH10688 | Soybean | nucleus | 18.52 | 17.16 |
| KRH57853 | Soybean | nucleus | 14.81 | 15.5 |
| KRH21647 | Soybean | nucleus | 17.04 | 15.4 |
Protein Annotations
| EntrezGene:100790030 | MapMan:15.5.28 | EMBL:ACUP02002121 | ncoils:Coil | InterPro:GEBP | EnsemblPlantsGene:GLYMA_03G245200 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| UniProt:I1JRL2 | EnsemblPlants:KRH68705 | ProteinID:KRH68705 | ProteinID:KRH68705.1 | PFAM:PF04504 | PANTHER:PTHR31662 |
| PANTHER:PTHR31662:SF6 | UniParc:UPI000233A4C0 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:44249778..44251845
Molecular Weight (calculated)
44616.8 Da
IEP (calculated)
4.745
GRAVY (calculated)
-0.752
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEQHDAVF REEDMDDDDD ESQEDEEYEE DDDEENVPSP STALAVTVAV PGSAVSNGGG GSPISKPTAT ATTATIVLAD SSDPKRRRLE LIEEKKPPPP
101: LDDSRRLFQR LWTDEDEIEL LQGFLDYTSQ RGSSHHNDTA LFYDQIKSKL QLDFNKNQLV EKIRRLKKKY RNVLNKICSG KEFSFKSAHD QATFEISRKI
201: WSNVTPVGDN SLDDDEINPS RSPNPNLNFS PVILKNETIF RNSTEKKTPK RSRPRSAVKI EPNDGSASNR DHNCISNTTP TATAAATNTT AAAAAGTNNN
301: NCNSGYGNNI PSLIEETVKS CLSPVLKELM AGAMGGGAFG GRGFSLNLNP MPFMNLSFGG GEMVDEKWRK QQILELEVYS KRLELVQDQI KAAMEELRSH
401: GGGGL
101: LDDSRRLFQR LWTDEDEIEL LQGFLDYTSQ RGSSHHNDTA LFYDQIKSKL QLDFNKNQLV EKIRRLKKKY RNVLNKICSG KEFSFKSAHD QATFEISRKI
201: WSNVTPVGDN SLDDDEINPS RSPNPNLNFS PVILKNETIF RNSTEKKTPK RSRPRSAVKI EPNDGSASNR DHNCISNTTP TATAAATNTT AAAAAGTNNN
301: NCNSGYGNNI PSLIEETVKS CLSPVLKELM AGAMGGGAFG GRGFSLNLNP MPFMNLSFGG GEMVDEKWRK QQILELEVYS KRLELVQDQI KAAMEELRSH
401: GGGGL
001: MASDQRDTDF SAESPDLEED GGGGGGGRGG GETESDEDVV IPEPNEAEDD DHDPDPDPEY EDLNSPSMIS RAPATKSSSG TVTVALPAGS AVPVASIPSD
101: SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK
201: EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG
301: VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE
401: VYSRRLELVQ EQIRATVNEL KTMPNGG
101: SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK
201: EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG
301: VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE
401: VYSRRLELVQ EQIRATVNEL KTMPNGG
Arabidopsis Description
Probable transcription factor At5g28040 [Source:UniProtKB/Swiss-Prot;Acc:F4K5T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.