Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G200500.1 | Wheat | nucleus | 81.66 | 86.44 |
| TraesCS3A01G165200.1 | Wheat | nucleus | 81.66 | 81.66 |
| HORVU5Hr1G051570.1 | Barley | plastid | 68.84 | 79.65 |
| HORVU3Hr1G034150.3 | Barley | nucleus | 76.88 | 75.74 |
| EES02686 | Sorghum | nucleus | 57.54 | 56.68 |
| EES02423 | Sorghum | nucleus | 55.03 | 53.94 |
| Zm00001d040254_P001 | Maize | nucleus | 53.77 | 53.63 |
| Os01t0249900-01 | Rice | plastid | 40.7 | 51.92 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 7.29 | 46.77 |
| TraesCS4D01G163600.1 | Wheat | nucleus | 31.41 | 36.02 |
| TraesCS2D01G156800.1 | Wheat | nucleus | 34.17 | 35.98 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 35.93 | 33.18 |
| KRG92750 | Soybean | nucleus | 28.64 | 32.29 |
| CDY21105 | Canola | nucleus | 27.64 | 30.9 |
| KRH34055 | Soybean | nucleus | 28.64 | 30.65 |
| CDY00009 | Canola | nucleus | 29.4 | 29.7 |
| KRH68705 | Soybean | nucleus | 29.9 | 29.38 |
| KRG96940 | Soybean | nucleus | 29.65 | 29.21 |
| CDX80681 | Canola | nucleus | 28.14 | 27.25 |
| GSMUA_Achr10P... | Banana | mitochondrion | 28.89 | 27.19 |
| CDY30023 | Canola | nucleus | 26.88 | 26.55 |
| Bra009986.1-P | Field mustard | nucleus | 27.39 | 26.33 |
| PGSC0003DMT400009206 | Potato | nucleus | 27.14 | 25.71 |
| CDY50767 | Canola | nucleus | 25.88 | 25.43 |
| AT3G04930.1 | Thale cress | nucleus | 28.89 | 25.22 |
| Solyc02g083750.1.1 | Tomato | nucleus | 26.63 | 25.18 |
| AT5G28040.2 | Thale cress | nucleus | 26.88 | 25.06 |
| PGSC0003DMT400057863 | Potato | nucleus | 28.14 | 25.06 |
| CDY41910 | Canola | nucleus | 26.63 | 24.94 |
| Bra040116.1-P | Field mustard | nucleus | 23.12 | 24.8 |
| Bra040416.1-P | Field mustard | nucleus | 25.88 | 24.24 |
| Solyc01g097890.2.1 | Tomato | nucleus | 26.88 | 23.62 |
| KRG92748 | Soybean | cytosol | 21.11 | 23.53 |
| CDY68986 | Canola | nucleus | 18.84 | 22.12 |
| Bra036116.1-P | Field mustard | nucleus | 19.6 | 21.79 |
| KRH34056 | Soybean | nucleus | 19.35 | 20.53 |
| CDX86188 | Canola | cytosol | 27.89 | 18.44 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 18.84 | 15.31 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G176400.1 | EnsemblPlantsGene:TraesCS3D01G176400 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF14 | PFAM:PF04504 |
| SEG:seg | MapMan:15.5.28 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:157751517..157752713
Molecular Weight (calculated)
41866.0 Da
IEP (calculated)
4.976
GRAVY (calculated)
-0.394
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAAPSRSR SSSSADQDEE GTDSDASNDS HPPTAQEAPP PPFPDSSAPP PPAPAALPDP AGAGPVPPPP PQGASAAEDS RRLFQRLWTD EEELLILRGF
101: LEFTSRRGTA FASHQYDTGP FYEEIRRKLS FDFSKNQLIE KLRRLKKKYR VCATRVAAQG AAFAFKSAHE GAIYDVARHI WRPAFKRDGD ASDEDDINPA
201: EAAAVAAAAA AAAATEPPAA VEEGGGGGAS AHTPRGRGSR RGRKRTAPEI EAPIFPATPA PMLTDAAQEP AITAFESSVP VIAQPPSAPA APLPPYPLTA
301: NGPTEADVRS ILSPLLKELI SSVAVPGQTG LGLGLGMGFG GADILGAGLG VAGLSPRVPG DEKWRQQQIL ELEVYLKRLE LVREQVMTVL QELRSSDS
101: LEFTSRRGTA FASHQYDTGP FYEEIRRKLS FDFSKNQLIE KLRRLKKKYR VCATRVAAQG AAFAFKSAHE GAIYDVARHI WRPAFKRDGD ASDEDDINPA
201: EAAAVAAAAA AAAATEPPAA VEEGGGGGAS AHTPRGRGSR RGRKRTAPEI EAPIFPATPA PMLTDAAQEP AITAFESSVP VIAQPPSAPA APLPPYPLTA
301: NGPTEADVRS ILSPLLKELI SSVAVPGQTG LGLGLGMGFG GADILGAGLG VAGLSPRVPG DEKWRQQQIL ELEVYLKRLE LVREQVMTVL QELRSSDS
001: MTKKLNPLED PPTATSSDED DVETSEAGEA SDDSSSSEED VPIKIRIKSP SATTAAAPPA KSTAVSTAAD SDSGSETETD SDSESTNPPN SGSGKTIALN
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
Arabidopsis Description
Probable transcription factor At1g61730 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.