Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21105 | Canola | nucleus | 75.2 | 78.37 |
| CDY30023 | Canola | nucleus | 72.78 | 67.0 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 7.82 | 46.77 |
| Bra040416.1-P | Field mustard | nucleus | 50.4 | 44.0 |
| Bra009986.1-P | Field mustard | nucleus | 47.17 | 42.27 |
| AT3G04930.1 | Thale cress | nucleus | 48.79 | 39.69 |
| Bra036116.1-P | Field mustard | nucleus | 38.27 | 39.66 |
| TraesCS3B01G200500.1 | Wheat | nucleus | 25.07 | 24.73 |
| Zm00001d040254_P001 | Maize | nucleus | 25.61 | 23.81 |
| Zm00001d022266_P001 | Maize | nucleus | 23.99 | 23.8 |
| TraesCS2A01G151700.1 | Wheat | nucleus | 23.99 | 23.55 |
| Os07t0636100-01 | Rice | nucleus | 15.9 | 23.51 |
| KRG92748 | Soybean | cytosol | 22.37 | 23.25 |
| TraesCS3D01G176400.1 | Wheat | nucleus | 24.8 | 23.12 |
| TraesCS2B01G176900.1 | Wheat | nucleus | 23.45 | 23.08 |
| TraesCS4B01G159600.1 | Wheat | nucleus | 21.56 | 23.05 |
| EES02686 | Sorghum | nucleus | 24.8 | 22.77 |
| HORVU4Hr1G045570.1 | Barley | nucleus | 21.29 | 22.7 |
| EER97613 | Sorghum | nucleus | 22.91 | 22.67 |
| KRH34056 | Soybean | nucleus | 22.91 | 22.67 |
| EES02423 | Sorghum | nucleus | 24.8 | 22.66 |
| EER92218 | Sorghum | nucleus | 22.91 | 22.55 |
| TraesCS2D01G156800.1 | Wheat | nucleus | 22.91 | 22.49 |
| TraesCS4D01G163600.1 | Wheat | nucleus | 21.02 | 22.48 |
| TraesCS4A01G138100.1 | Wheat | nucleus | 21.02 | 22.41 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 25.88 | 22.27 |
| Zm00001d006945_P001 | Maize | nucleus | 21.83 | 21.95 |
| HORVU5Hr1G051570.1 | Barley | plastid | 19.95 | 21.51 |
| HORVU2Hr1G027390.1 | Barley | plastid | 21.56 | 21.39 |
| Zm00001d047421_P001 | Maize | nucleus | 21.56 | 21.33 |
| TraesCS3A01G165200.1 | Wheat | nucleus | 22.64 | 21.11 |
| Zm00001d029287_P001 | Maize | nucleus | 21.56 | 20.89 |
| Os01t0249900-01 | Rice | plastid | 17.52 | 20.83 |
| GSMUA_Achr10P... | Banana | mitochondrion | 23.45 | 20.57 |
| HORVU3Hr1G034150.3 | Barley | nucleus | 22.1 | 20.3 |
| Os03t0370250-01 | Rice | cytosol | 22.37 | 20.1 |
| Bra025445.1-P | Field mustard | nucleus | 12.94 | 15.64 |
| Bra013873.1-P | Field mustard | nucleus | 14.29 | 14.8 |
| Bra019183.1-P | Field mustard | nucleus | 14.56 | 14.75 |
| Bra019847.1-P | Field mustard | nucleus | 14.02 | 14.61 |
| Bra021317.1-P | Field mustard | nucleus | 11.86 | 14.29 |
| Bra034488.1-P | Field mustard | nucleus | 11.86 | 13.66 |
| Bra031402.1-P | Field mustard | nucleus | 11.86 | 13.25 |
| Bra032717.1-P | Field mustard | nucleus | 11.59 | 12.95 |
| Bra027078.1-P | Field mustard | nucleus | 13.21 | 12.89 |
| Bra038583.1-P | Field mustard | nucleus | 13.21 | 11.69 |
Protein Annotations
Description
AT5G28040 (E=1e-028) | transcription regulator
Coordinates
chrA01:+:28356166..28357348
Molecular Weight (calculated)
40833.7 Da
IEP (calculated)
4.953
GRAVY (calculated)
-0.700
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSDHRDAVF SIESPDHEGG ESDTDDDVAL PEANDDLNSP SNVTVALPSG SSAVPVSVIP ADSSPKLHHR TTEIVHRRQQ PPPPAAIDDS RRLFQRLWTD
101: EDEIELLRGF LDYVTTHRGG SNPPDTAPFL SPPLPEAVDR RGRDRAPPRL PRLRDDAQRR QQSAGYGAVL RDDQVEAPAG VQQEPAEVLF KSPHDQSTFE
201: ISRKIWNRTG KIIGFEMDFE VNGNSPGSNP SAAVEIESEN GVEKKGSRKR SRSRIGKIEE DNNVNVNVNE TVSSSIGGLI EETVRSCVSP LIKEMMNGTT
301: SMMMAGSLGP VFTRSLGYGL EGGGGGNKAV RDERWRKQQI LELEVYSRRL ELVQEEIRAT LHELKTMPSG V
101: EDEIELLRGF LDYVTTHRGG SNPPDTAPFL SPPLPEAVDR RGRDRAPPRL PRLRDDAQRR QQSAGYGAVL RDDQVEAPAG VQQEPAEVLF KSPHDQSTFE
201: ISRKIWNRTG KIIGFEMDFE VNGNSPGSNP SAAVEIESEN GVEKKGSRKR SRSRIGKIEE DNNVNVNVNE TVSSSIGGLI EETVRSCVSP LIKEMMNGTT
301: SMMMAGSLGP VFTRSLGYGL EGGGGGNKAV RDERWRKQQI LELEVYSRRL ELVQEEIRAT LHELKTMPSG V
001: MTSDHRDALF SLELESPDPD EGGVADGGES DTDEDLRDND DVVMPGTNEA EAEDDDPEEE DLNSPSTSSL PMVSTISATA VVSGTPTATS STGAVTVALP
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI
Arabidopsis Description
Probable transcription factor At3g04930 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.