Factsheet for Bra038583.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26346	Canola	nucleus	73.51	74.76
Bra025445.1-P	Field mustard	nucleus	30.31	41.37
Bra019847.1-P	Field mustard	nucleus	25.3	29.78
Bra021317.1-P	Field mustard	nucleus	18.85	25.65
Bra031402.1-P	Field mustard	nucleus	20.29	25.6
AT1G11510.1	Thale cress	nucleus	19.33	23.01
Os09t0451700-00	Rice	nucleus	9.79	22.78
Bra034488.1-P	Field mustard	nucleus	16.71	21.74
Bra027078.1-P	Field mustard	nucleus	19.57	21.58
Bra032717.1-P	Field mustard	nucleus	16.71	21.08
PGSC0003DMT400079215	Potato	nucleus	18.14	19.05
GSMUA_AchrUn_...	Banana	nucleus	17.66	17.96
KRH21647	Soybean	nucleus	18.62	17.41
Bra019183.1-P	Field mustard	nucleus	15.04	17.21
KRH10688	Soybean	nucleus	16.95	16.25
Bra013873.1-P	Field mustard	nucleus	13.84	16.2
Bra040416.1-P	Field mustard	nucleus	15.27	15.06
KRH57853	Soybean	nucleus	13.84	14.99
Bra009986.1-P	Field mustard	nucleus	14.56	14.73
EER96833	Sorghum	nucleus	15.27	14.48
Zm00001d020688_P001	Maize	nucleus	13.6	13.32
Bra040116.1-P	Field mustard	nucleus	11.69	13.21
Zm00001d049991_P001	Maize	nucleus, plastid	13.84	12.72
KXG25358	Sorghum	nucleus, plastid	13.13	12.64
Zm00001d005865_P001	Maize	nucleus	13.13	12.56
Os08t0467600-00	Rice	nucleus	15.51	12.22
TraesCS5B01G233000.1	Wheat	nucleus	14.08	12.07
TraesCS5A01G234500.1	Wheat	nucleus	13.84	11.84
TraesCS5D01G241400.1	Wheat	nucleus	13.6	11.63
Bra036116.1-P	Field mustard	nucleus	9.79	11.45
HORVU5Hr1G067630.1	Barley	nucleus	13.37	11.43
VIT_00s0999g00010.t01	Wine grape	cytosol, nucleus	4.3	2.98

Protein Annotations

EnsemblPlants:Bra038583.1	EnsemblPlants:Bra038583.1-P	EnsemblPlantsGene:Bra038583	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:GEBP	PANTHER:PTHR31662	PANTHER:PTHR31662:SF1
PFAM:PF04504	SEG:seg	UniParc:UPI000253E54D	UniProt:M4FBW7	MapMan:15.5.28	:

Description

AT1G61730 (E=4e-023) | DNA-binding storekeeper protein-related

Coordinates

chrScaffold000149:+:250721..251980

Molecular Weight (calculated)

46356.1 Da

IEP (calculated)

4.805

GRAVY (calculated)

-1.013

Length

419 amino acids

Sequence
(BLAST)

001: MKPNKTHSQV TPLKNRKKKT KEKVMTVEHL QDQQNASSSD EDSVDNSLSA EEEETDSETE PVVDSKKGET SKTRANSSSP VTKPPPADSN KVETSKKRSS
101: ETGEGEEAKR VKRVSLSGDG DNKKSTSSSE GETDSESETE SVADSKIVET SSKPKTTANS LSEVATVSSS YEDSSSSSGD EETDPPVPNP VVEPPAESSR
201: KVVEASSKKQ PSIETDEGEA KRDTKKNYFQ RVWTEEDEIV ILQGIIDYRF ETGSNPFDDK NALYELLKES VSFNPTKIQF LEKIRGLKKK FDSNLGKEKK
301: KGEELAFSKS HDLEAFRLSK FVWGDHDGIT ANAIGVEPAV LKLDEPKQGS VSLVESVTRF GMDDLVAKKG WSRLSSEDKK SLEEEWEALA LEEFKFYSRK
401: SRIIHDAIAK MAEASQPDH

Best Arabidopsis Sequence Match ( AT1G11510.2 )
(BLAST)

001: MSRRFNPLED PPSASSSDEE GKEIARNSSS DDEDDVSSEN PSPLKTTLDA VSDSESGSDE ETDSDSELEK KKDQVVTNPV DVKRAKKVSG EEEKKKSGGG
101: GEETKKTYFQ RLWTEDDEIV VLQGLIDDKK DTGVSNTNKV YELVKKSISF DVSKNQLMEK LRALKKKYEN NLGKAKDGVE PTFVKPHDRK AFELSKLVWG
201: GIRMALASGM KSNEKSKKSS KFESVKHELD SSLPNSKNNC EDEVMDEGEV SFTKSSLVRS IVGLGMDELT AQQGLSKLAS KDMKRFYEQW KAMQAREFEF
301: FLQKHGFLFE VLSKISEAFG SNA

Arabidopsis Description

Probable transcription factor At1g11510 [Source:UniProtKB/Swiss-Prot;Acc:C0SUU6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.