Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27657 | Canola | nucleus | 72.96 | 73.68 |
| Bra019847.1-P | Field mustard | nucleus | 39.41 | 33.99 |
| AT1G11510.1 | Thale cress | nucleus | 37.78 | 32.95 |
| Bra038583.1-P | Field mustard | nucleus | 41.37 | 30.31 |
| Bra021317.1-P | Field mustard | nucleus | 30.29 | 30.19 |
| Bra031402.1-P | Field mustard | nucleus | 31.92 | 29.52 |
| Bra027078.1-P | Field mustard | nucleus | 33.22 | 26.84 |
| Bra034488.1-P | Field mustard | nucleus | 26.71 | 25.47 |
| Bra032717.1-P | Field mustard | nucleus | 26.71 | 24.7 |
| Os09t0451700-00 | Rice | nucleus | 13.36 | 22.78 |
| Bra013873.1-P | Field mustard | nucleus | 24.76 | 21.23 |
| KRH21647 | Soybean | nucleus | 29.64 | 20.31 |
| Bra019183.1-P | Field mustard | nucleus | 23.13 | 19.4 |
| KRH10688 | Soybean | nucleus | 27.36 | 19.22 |
| KRH57853 | Soybean | nucleus | 24.1 | 19.12 |
| PGSC0003DMT400079215 | Potato | nucleus | 24.43 | 18.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.82 | 16.26 |
| Bra009986.1-P | Field mustard | nucleus | 21.5 | 15.94 |
| Bra040416.1-P | Field mustard | nucleus | 19.87 | 14.35 |
| Bra040116.1-P | Field mustard | nucleus | 15.64 | 12.94 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 18.57 | 12.5 |
| KXG25358 | Sorghum | nucleus, plastid | 16.29 | 11.49 |
| Zm00001d020688_P001 | Maize | nucleus | 15.96 | 11.45 |
| EER96833 | Sorghum | nucleus | 15.64 | 10.86 |
| Bra036116.1-P | Field mustard | nucleus | 12.38 | 10.61 |
| Os08t0467600-00 | Rice | nucleus | 17.92 | 10.34 |
| Zm00001d005865_P001 | Maize | nucleus | 14.33 | 10.05 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 15.96 | 10.0 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 15.96 | 10.0 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 15.96 | 10.0 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 15.64 | 9.82 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 4.23 | 2.15 |
Protein Annotations
| EnsemblPlants:Bra025445.1 | EnsemblPlants:Bra025445.1-P | EnsemblPlantsGene:Bra025445 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 |
| PFAM:PF04504 | SEG:seg | UniParc:UPI0002543879 | UniProt:M4E9I9 | MapMan:15.5.28 | : |
Description
AT1G11510 (E=4e-052) | DNA-binding storekeeper protein-related
Coordinates
chrA04:+:8693888..8694811
Molecular Weight (calculated)
34649.7 Da
IEP (calculated)
5.448
GRAVY (calculated)
-0.892
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGKLLKKLE DPPVASSSSE EEEDEDAVAN SSSEEEEEET DSETEAEPVA KPLVKPPADS IKVETSSKPE TKKKRSSETN EVEAKRVKRV SGEETKKSCF
101: QRVWTGEDEI AVLQGIIDFK TETGSSPYDD KNALYDLVKK SVSFDVTKTQ FMEKIRALKK KFENNLGRGK KKGKDPSFSK AHDRKAFDLA KLVWGDNGIM
201: ALEPLSAVKS KKVEHAVKKQ EEPAVMKQEE PAVMNQEFVP IVDLVARFGV DDLAAKQGWS RLSSKDRERF EEQWKELQLK EFKFYSQKSG FIHEVVTKMA
301: EASRPDH
101: QRVWTGEDEI AVLQGIIDFK TETGSSPYDD KNALYDLVKK SVSFDVTKTQ FMEKIRALKK KFENNLGRGK KKGKDPSFSK AHDRKAFDLA KLVWGDNGIM
201: ALEPLSAVKS KKVEHAVKKQ EEPAVMKQEE PAVMNQEFVP IVDLVARFGV DDLAAKQGWS RLSSKDRERF EEQWKELQLK EFKFYSQKSG FIHEVVTKMA
301: EASRPDH
001: MSRRFNPLED PPSASSSDEE GKEIARNSSS DDEDDVSSEN PSPLKTTLDA VSDSESGSDE ETDSDSELEK KKDQVVTNPV DVKRAKKVKT SEKSGAKRSL
101: EVDEAAVSMD VKRAKKVSGE EEKKKSGGGG EETKKTYFQR LWTEDDEIVV LQGLIDDKKD TGVSNTNKVY ELVKKSISFD VSKNQLMEKL RALKKKYENN
201: LGKAKDGVEP TFVKPHDRKA FELSKLVWGG IRMALASGMK SNEKSKKSSK FESVKHELDS SLPNSKNNCE DEVMDEGEVS FTKSSLVRSI VGLGMDELTA
301: QQGLSKLASK DMKRFYEQWK AMQAREFEFF LQKHGFLFEV LSKISEAFGS NA
101: EVDEAAVSMD VKRAKKVSGE EEKKKSGGGG EETKKTYFQR LWTEDDEIVV LQGLIDDKKD TGVSNTNKVY ELVKKSISFD VSKNQLMEKL RALKKKYENN
201: LGKAKDGVEP TFVKPHDRKA FELSKLVWGG IRMALASGMK SNEKSKKSSK FESVKHELDS SLPNSKNNCE DEVMDEGEVS FTKSSLVRSI VGLGMDELTA
301: QQGLSKLASK DMKRFYEQWK AMQAREFEFF LQKHGFLFEV LSKISEAFGS NA
Arabidopsis Description
Probable transcription factor At1g11510 [Source:UniProtKB/Swiss-Prot;Acc:C0SUU6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.