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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 4
  • plastid 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d049991_P001 Maize nucleus, plastid 51.72 49.34
Os08t0467600-00 Rice nucleus 42.99 35.15
EER96833 Sorghum nucleus 33.33 32.81
GSMUA_AchrUn_... Banana nucleus 20.0 21.12
CDY32382 Canola nucleus 13.1 20.21
CDY68087 Canola nucleus 14.02 19.81
CDY12911 Canola nucleus 8.74 19.69
KRH57853 Soybean nucleus 17.01 19.12
Bra032717.1-P Field mustard nucleus 14.25 18.67
AT4G00130.1 Thale cress mitochondrion 8.28 18.56
CDX94469 Canola nucleus 5.75 18.52
Bra021317.1-P Field mustard nucleus 13.1 18.51
Bra034488.1-P Field mustard nucleus 13.56 18.32
AT4G00250.1 Thale cress nucleus 13.33 18.18
CDY07275 Canola nucleus 14.94 18.16
AT4G00390.1 Thale cress nucleus 15.17 18.13
KRH10688 Soybean nucleus 18.16 18.08
CDX89436 Canola nucleus 14.25 17.61
PGSC0003DMT400079215 Potato nucleus 16.09 17.54
CDY01140 Canola nucleus 11.03 17.39
CDY18747 Canola nucleus 14.25 17.37
Bra013873.1-P Field mustard nucleus 14.02 17.04
KRH21647 Soybean nucleus 17.47 16.96
AT1G44810.1 Thale cress nucleus 11.49 16.89
Bra031402.1-P Field mustard nucleus 12.87 16.87
AT4G00238.1 Thale cress nucleus 13.33 16.81
AT2G01370.1 Thale cress mitochondrion 9.66 16.67
AT1G66420.1 Thale cress nucleus 10.57 16.31
Bra025445.1-P Field mustard nucleus 11.49 16.29
AT1G61730.1 Thale cress nucleus 14.02 16.22
CDY61958 Canola nucleus 13.33 15.98
CDX97966 Canola nucleus 11.95 15.85
Bra019183.1-P Field mustard nucleus 13.33 15.85
VIT_00s0868g00010.t01 Wine grape nucleus 15.86 15.79
CDY27657 Canola nucleus 11.03 15.79
CDY11061 Canola nucleus 13.1 15.62
Bra019847.1-P Field mustard nucleus 12.64 15.45
Bra027078.1-P Field mustard nucleus 13.33 15.26
CDX92682 Canola nucleus 12.87 15.14
CDY49787 Canola nucleus 12.87 15.09
AT4G01260.1 Thale cress nucleus 11.26 15.08
AT1G55950.1 Thale cress mitochondrion 7.59 15.07
AT1G11510.1 Thale cress nucleus 11.95 14.77
EER97613 Sorghum nucleus 12.64 14.67
AT4G00610.1 Thale cress plastid 10.8 14.33
CDX99698 Canola nucleus 9.89 13.96
AT4G25210.1 Thale cress nucleus 11.72 13.86
EER92218 Sorghum nucleus 11.95 13.79
CDY52323 Canola nucleus 5.29 13.61
VIT_12s0059g02690.t01 Wine grape nucleus 13.56 13.53
EES02686 Sorghum nucleus 12.41 13.37
EES02423 Sorghum nucleus 12.41 13.3
Bra038583.1-P Field mustard nucleus 12.64 13.13
CDY26346 Canola nucleus 11.95 12.62
VIT_00s0999g00010.t01 Wine grape cytosol, nucleus 2.99 2.15
Protein Annotations
MapMan:15.5.28UniProt:A0A1B6PI54InterPro:GEBPGO:GO:0003674GO:GO:0005215GO:GO:0005315
GO:GO:0005575GO:GO:0006139GO:GO:0006355GO:GO:0006810GO:GO:0006817GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021EnsemblPlants:KXG25358
ProteinID:KXG25358ProteinID:KXG25358.2PFAM:PF04504PANTHER:PTHR31662PANTHER:PTHR31662:SF3EnsemblPlantsGene:SORBI_3007G153700
UniParc:UPI000B8B9C1FSEG:seg::::
Description
hypothetical protein
Coordinates
chr7:+:58664166..58666194
Molecular Weight (calculated)
47720.3 Da
IEP (calculated)
10.795
GRAVY (calculated)
-1.130
Length
435 amino acids
Sequence
(BLAST)
001: MAPKRPAAAA GSGSASDASD GEAGAAPNSH RRRASPSPSR SRSRSRSKSP RSNARPSVAA SDSDADARAP SPRRANRERS PRDHLDSDAD ADAGAGTGRR
101: APSPRRRGER SPSFHSDSDS DADAAGRSPS PRRKRERTPG LRSDSDSDNS AAAAASDDDG GGAGDASPLP SARRSFRIET SNVKPVSTRP MDVPLRGAAG
201: SSQRRPKRRP SPHSPEHQKR PPRVWSPEDE VTILSALIEF RAKKGRLPAS IQDTGKVHSQ IIHQLTANAS TAQLSDKVRR LKHKYKLLLT RAKNGRDPNL
301: PTQHDRDVYQ LSKKVWGLKS LVMVRGSRVS HEDTEDAEES NEEQEIEESD EDMENGWELR DRTSKKPKAV EELSKEHPSG PIFRKAFGVL EKSKARAVEE
401: KLRKFRMSEI RQQLQRMDLM KETVGMVLDA LEGAY
Best Arabidopsis Sequence Match ( AT1G11510.2 )
(BLAST)
001: MSRRFNPLED PPSASSSDEE GKEIARNSSS DDEDDVSSEN PSPLKTTLDA VSDSESGSDE ETDSDSELEK KKDQVVTNPV DVKRAKKVSG EEEKKKSGGG
101: GEETKKTYFQ RLWTEDDEIV VLQGLIDDKK DTGVSNTNKV YELVKKSISF DVSKNQLMEK LRALKKKYEN NLGKAKDGVE PTFVKPHDRK AFELSKLVWG
201: GIRMALASGM KSNEKSKKSS KFESVKHELD SSLPNSKNNC EDEVMDEGEV SFTKSSLVRS IVGLGMDELT AQQGLSKLAS KDMKRFYEQW KAMQAREFEF
301: FLQKHGFLFE VLSKISEAFG SNA
Arabidopsis Description
Probable transcription factor At1g11510 [Source:UniProtKB/Swiss-Prot;Acc:C0SUU6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.