Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G25210.1 | Thale cress | nucleus | 48.45 | 25.54 |
| CDX94469 | Canola | nucleus | 16.49 | 23.7 |
| CDY11061 | Canola | nucleus | 37.63 | 20.0 |
| CDX89436 | Canola | nucleus | 36.08 | 19.89 |
| Bra013873.1-P | Field mustard | nucleus | 36.08 | 19.55 |
| Bra019183.1-P | Field mustard | nucleus | 36.6 | 19.4 |
| CDX92682 | Canola | nucleus | 35.57 | 18.65 |
| AT4G01260.1 | Thale cress | nucleus | 27.32 | 16.31 |
| AT2G01370.1 | Thale cress | mitochondrion | 19.59 | 15.08 |
| AT4G00250.1 | Thale cress | nucleus | 22.16 | 13.48 |
| KRH57853 | Soybean | nucleus | 23.2 | 11.63 |
| AT4G00238.1 | Thale cress | nucleus | 20.62 | 11.59 |
| Os09t0451700-00 | Rice | nucleus | 10.31 | 11.11 |
| AT1G11510.1 | Thale cress | nucleus | 20.1 | 11.08 |
| AT1G61730.1 | Thale cress | nucleus | 21.13 | 10.9 |
| AT1G44810.1 | Thale cress | nucleus | 16.49 | 10.81 |
| KRH10688 | Soybean | nucleus | 24.23 | 10.76 |
| AT1G66420.1 | Thale cress | nucleus | 15.46 | 10.64 |
| PGSC0003DMT400079215 | Potato | nucleus | 21.65 | 10.53 |
| AT4G00390.1 | Thale cress | nucleus | 19.07 | 10.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.13 | 9.95 |
| KRH21647 | Soybean | nucleus | 22.68 | 9.82 |
| AT5G28040.2 | Thale cress | nucleus | 19.59 | 8.9 |
| AT1G55950.1 | Thale cress | mitochondrion | 9.79 | 8.68 |
| Zm00001d020688_P001 | Maize | nucleus | 19.07 | 8.64 |
| AT3G04930.1 | Thale cress | nucleus | 20.1 | 8.55 |
| KXG25358 | Sorghum | nucleus, plastid | 18.56 | 8.28 |
| Zm00001d005865_P001 | Maize | nucleus | 18.56 | 8.22 |
| AT4G00610.1 | Thale cress | plastid | 13.4 | 7.93 |
| EER96833 | Sorghum | nucleus | 17.01 | 7.47 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 17.53 | 7.46 |
| Os08t0467600-00 | Rice | nucleus | 19.07 | 6.95 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 17.53 | 6.94 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 17.01 | 6.73 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 17.01 | 6.73 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 16.49 | 6.54 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | EntrezGene:825649 | ProteinID:AAC19304.1 | ProteinID:AEE81827.1 | ArrayExpress:AT4G00130 | EnsemblPlantsGene:AT4G00130 |
| RefSeq:AT4G00130 | TAIR:AT4G00130 | RefSeq:AT4G00130-TAIR-G | EnsemblPlants:AT4G00130.1 | TAIR:AT4G00130.1 | ProteinID:CAB80771.1 |
| ncoils:Coil | EMBL:DQ446786 | InterPro:GEBP | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | RefSeq:NP_191924.2 | PFAM:PF04504 |
| PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 | UniProt:Q1PED2 | UniParc:UPI0000D5BCD5 | SEG:seg | : |
Description
Probable transcription factor At4g00130 [Source:UniProtKB/Swiss-Prot;Acc:Q1PED2]
Coordinates
chr4:+:48114..49068
Molecular Weight (calculated)
22549.6 Da
IEP (calculated)
10.193
GRAVY (calculated)
-0.715
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRLRRLLER MLRRCCFRDC SVRLTKSLCF KKLIEFDATK NQIVTKLQRL KKKFNNAVKN ARKKGQTEDE VEYAKESEKK RFDLSIMIWG SNGVLVAGKS
101: SKKKVAPKEM KPEETDAKVV NEGLSIGREM VPFGSSCGLD ESKLTTGWEN VEDGAEKREV EEKWKKFKDK LFELLYERSV LMNKTEAMMF KAES
101: SKKKVAPKEM KPEETDAKVV NEGLSIGREM VPFGSSCGLD ESKLTTGWEN VEDGAEKREV EEKWKKFKDK LFELLYERSV LMNKTEAMMF KAES
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.