Factsheet for Zm00001d049991_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25358	Sorghum	nucleus, plastid	49.34	51.72
Zm00001d020688_P001	Maize	nucleus	34.43	36.68
Os08t0467600-00	Rice	nucleus	41.89	35.9
Zm00001d005865_P001	Maize	nucleus	29.39	30.59
GSMUA_AchrUn_...	Banana	nucleus	20.83	23.06
CDY32382	Canola	nucleus	12.72	20.57
CDY68087	Canola	nucleus	13.82	20.45
CDY01140	Canola	nucleus	11.84	19.57
CDY18747	Canola	nucleus	15.13	19.33
Bra032717.1-P	Field mustard	nucleus	14.04	19.28
AT4G00390.1	Thale cress	nucleus	15.13	18.96
Bra034488.1-P	Field mustard	nucleus	13.38	18.94
KRH57853	Soybean	nucleus	16.01	18.86
Bra021317.1-P	Field mustard	nucleus	12.72	18.83
CDY12911	Canola	nucleus	7.89	18.65
Bra025445.1-P	Field mustard	nucleus	12.5	18.57
AT1G61730.1	Thale cress	nucleus	14.91	18.09
PGSC0003DMT400079215	Potato	nucleus	15.79	18.05
CDX97966	Canola	nucleus	12.94	17.99
AT2G01370.1	Thale cress	mitochondrion	9.87	17.86
CDY27657	Canola	nucleus	11.84	17.76
Zm00001d006945_P001	Maize	nucleus	14.25	17.62
CDY07275	Canola	nucleus	13.82	17.6
AT4G00130.1	Thale cress	mitochondrion	7.46	17.53
Bra019847.1-P	Field mustard	nucleus	13.6	17.42
Zm00001d022266_P001	Maize	nucleus	14.25	17.38
Zm00001d029287_P001	Maize	nucleus	14.47	17.23
AT1G44810.1	Thale cress	nucleus	11.18	17.23
Bra031402.1-P	Field mustard	nucleus	12.5	17.17
CDY49787	Canola	nucleus	13.82	16.98
KRH10688	Soybean	nucleus	16.01	16.7
CDX94469	Canola	nucleus	4.82	16.3
KRH21647	Soybean	nucleus	15.79	16.07
Zm00001d047421_P001	Maize	nucleus	13.16	16.0
CDY52323	Canola	nucleus	5.92	15.98
CDX89436	Canola	nucleus	12.28	15.91
AT1G66420.1	Thale cress	nucleus	9.65	15.6
CDX92682	Canola	nucleus	12.5	15.41
Bra013873.1-P	Field mustard	nucleus	12.06	15.36
AT4G00250.1	Thale cress	nucleus	10.75	15.36
Bra027078.1-P	Field mustard	nucleus	12.72	15.26
CDX99698	Canola	nucleus	10.31	15.26
VIT_00s0868g00010.t01	Wine grape	nucleus	14.47	15.1
Zm00001d040254_P001	Maize	nucleus	13.16	15.04
AT4G00238.1	Thale cress	nucleus	11.18	14.78
Bra019183.1-P	Field mustard	nucleus	11.84	14.75
VIT_12s0059g02690.t01	Wine grape	nucleus	13.82	14.45
CDY61958	Canola	nucleus	11.4	14.33
AT1G55950.1	Thale cress	mitochondrion	6.8	14.16
Bra038583.1-P	Field mustard	nucleus	12.72	13.84
CDY26346	Canola	nucleus	12.5	13.84
CDY11061	Canola	nucleus	10.96	13.7
AT1G11510.1	Thale cress	nucleus	10.53	13.64
AT4G25210.1	Thale cress	nucleus	10.96	13.59
AT4G01260.1	Thale cress	nucleus	9.43	13.23
AT4G00610.1	Thale cress	plastid	9.21	12.8
VIT_00s0999g00010.t01	Wine grape	cytosol, nucleus	1.75	1.32

Protein Annotations

EMBL:KJ727996	EnsemblPlants:Zm00001d049991_P001	EnsemblPlants:Zm00001d049991_T001	EnsemblPlantsGene:Zm00001d049991	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:GEBP	PANTHER:PTHR31662
PANTHER:PTHR31662:SF3	PFAM:PF04504	ProteinID:AQK51756.1	SEG:seg	UniParc:UPI000221E69E	UniProt:K7UTP1
MapMan:15.5.28	:	:	:	:	:

Description

GeBP-transcription factor 20GLABROUS1 enhancer-binding protein-like

Coordinates

chr4:+:58070649..58072019

Molecular Weight (calculated)

49718.7 Da

IEP (calculated)

10.169

GRAVY (calculated)

-0.924

Length

456 amino acids

Sequence
(BLAST)

001: MALKRSAAAA SLGSASDASD GEAGAARNSH RRRVSPSRSR SESPRPNLGP SAAASDTNRE RSPRDHLDSD ADSDADAGAG AGRGARSSRL LGERSPSFHS
101: NSDADVAGRS PSPRRNRERT LHLHSDSDSD NSTTAAAAAS DDAGDASPLA IAHRASHIGT SNVKPVSTRP MDVPSRAAAG SSQRRSKRRP SPHSPEHQKR
201: PPRVWSPEDE VTILSALIEF RAKKGRLPAS IQDTSKVHSQ IIHQLTANAS TAQLSDKVRR LKHKYKLLLT RSKNGRDPDL PTKHDRDVYQ LSKKVWGLKS
301: LLLVRGSRVS HEDTEDAEES NEEQEIEESD EDIENGWGLR GRTGKKPRAL TFENGNGNAI VTAGRACHGD GSGRDDAEKG KQMYPYLWEA VEELSKEHPS
401: GPIFRKAFGV LEKSKAGAVE EKLRKFRMLE IRQQLRRMDL MKETVGLVLD ALEGAY

Best Arabidopsis Sequence Match ( AT1G11510.2 )
(BLAST)

001: MSRRFNPLED PPSASSSDEE GKEIARNSSS DDEDDVSSEN PSPLKTTLDA VSDSESGSDE ETDSDSELEK KKDQVVTNPV DVKRAKKVSG EEEKKKSGGG
101: GEETKKTYFQ RLWTEDDEIV VLQGLIDDKK DTGVSNTNKV YELVKKSISF DVSKNQLMEK LRALKKKYEN NLGKAKDGVE PTFVKPHDRK AFELSKLVWG
201: GIRMALASGM KSNEKSKKSS KFESVKHELD SSLPNSKNNC EDEVMDEGEV SFTKSSLVRS IVGLGMDELT AQQGLSKLAS KDMKRFYEQW KAMQAREFEF
301: FLQKHGFLFE VLSKISEAFG SNA

Arabidopsis Description

Probable transcription factor At1g11510 [Source:UniProtKB/Swiss-Prot;Acc:C0SUU6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.