Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61958 | Canola | nucleus | 97.93 | 52.07 |
| CDY32382 | Canola | nucleus | 68.91 | 47.16 |
| Bra027078.1-P | Field mustard | nucleus | 86.01 | 43.68 |
| CDY07275 | Canola | nucleus | 75.65 | 40.78 |
| AT1G61730.1 | Thale cress | nucleus | 61.14 | 31.38 |
| CDY68087 | Canola | nucleus | 49.22 | 30.84 |
| CDY01140 | Canola | nucleus | 43.01 | 30.07 |
| AT4G00390.1 | Thale cress | nucleus | 48.7 | 25.82 |
| CDY18747 | Canola | nucleus | 47.67 | 25.77 |
| CDX99698 | Canola | nucleus | 36.27 | 22.73 |
| CDX97966 | Canola | nucleus | 37.82 | 22.26 |
| CDY27657 | Canola | nucleus | 31.61 | 20.07 |
| CDY49787 | Canola | nucleus | 37.31 | 19.41 |
| CDY52323 | Canola | nucleus | 16.06 | 18.34 |
| Os09t0451700-00 | Rice | nucleus | 13.99 | 15.0 |
| CDX94469 | Canola | nucleus | 10.36 | 14.81 |
| CDX89436 | Canola | nucleus | 26.42 | 14.49 |
| CDX92682 | Canola | nucleus | 25.91 | 13.51 |
| CDY11061 | Canola | nucleus | 25.39 | 13.42 |
| CDY26346 | Canola | nucleus | 25.91 | 12.14 |
| KRH21647 | Soybean | nucleus | 27.46 | 11.83 |
| KRH10688 | Soybean | nucleus | 25.91 | 11.44 |
| PGSC0003DMT400079215 | Potato | nucleus | 23.32 | 11.28 |
| KRH57853 | Soybean | nucleus | 21.24 | 10.59 |
| CDY21105 | Canola | nucleus | 18.13 | 9.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.21 | 9.47 |
| CDY00009 | Canola | nucleus | 19.17 | 9.39 |
| CDY50767 | Canola | nucleus | 18.65 | 8.89 |
| KXG25358 | Sorghum | nucleus, plastid | 19.69 | 8.74 |
| Zm00001d020688_P001 | Maize | nucleus | 19.17 | 8.64 |
| EER96833 | Sorghum | nucleus | 19.69 | 8.6 |
| CDY41910 | Canola | nucleus | 18.65 | 8.47 |
| CDY30023 | Canola | nucleus | 17.62 | 8.44 |
| Zm00001d005865_P001 | Maize | nucleus | 18.65 | 8.22 |
| CDX80681 | Canola | nucleus | 17.1 | 8.03 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 20.21 | 7.98 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 20.21 | 7.96 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 20.21 | 7.96 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 20.21 | 7.96 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 18.65 | 7.89 |
| Os08t0467600-00 | Rice | nucleus | 18.65 | 6.77 |
| CDX86188 | Canola | cytosol | 16.58 | 5.32 |
| CDY68986 | Canola | nucleus | 7.25 | 4.13 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 0.52 | 0.17 |
Protein Annotations
| EnsemblPlants:CDY12911 | EnsemblPlantsGene:GSBRNA2T00070582001 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 | PFAM:PF04504 |
| ProteinID:CDY12911 | ProteinID:CDY12911.1 | SEG:seg | UniParc:UPI0004EEE013 | UniProt:A0A078FI80 | MapMan:15.5.28 |
Description
BnaA09g13630DBnaA09g13630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FI80]
Coordinates
chrLK032028:-:355403..356032
Molecular Weight (calculated)
22209.6 Da
IEP (calculated)
10.010
GRAVY (calculated)
-0.781
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDFKNDTGK SPYDDTNVYY DYIKKSISFE VSKNQFMDKI RSLRKKYIGK EKPSFTKPHD QKSYRLCQYI WGPDGMGLES AVKSNGASKK SQKKTKKLDS
101: VKQELSFGAS PNGKTHDWFE NSFLVKGIAG FGVDEHYVKQ RWSLVPVETK KKVEEKLKLL QAKEIEFVLQ KTEVLHEVTT MIAEASKNKP LDI
101: VKQELSFGAS PNGKTHDWFE NSFLVKGIAG FGVDEHYVKQ RWSLVPVETK KKVEEKLKLL QAKEIEFVLQ KTEVLHEVTT MIAEASKNKP LDI
001: MTKKLNPLED PPTATSSDED DVETSEAGEA SDDSSSSEED VPIKIRIKSP SATTAAAPPA KSTAVSTAAD SDSGSETETD SDSESTNPPN SGSGKTIALN
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
Arabidopsis Description
Probable transcription factor At1g61730 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.