Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0868g00010.t01 | Wine grape | nucleus | 13.24 | 18.31 |
| CDY52323 | Canola | nucleus | 3.15 | 11.24 |
| CDY07275 | Canola | nucleus | 4.64 | 7.82 |
| CDY61958 | Canola | nucleus | 4.64 | 7.71 |
| CDY18747 | Canola | nucleus | 4.47 | 7.56 |
| Bra031402.1-P | Field mustard | nucleus | 4.14 | 7.53 |
| Bra027078.1-P | Field mustard | nucleus | 4.64 | 7.37 |
| AT4G25210.1 | Thale cress | nucleus | 4.14 | 6.79 |
| CDY27657 | Canola | nucleus | 3.31 | 6.58 |
| AT1G44810.1 | Thale cress | nucleus | 3.15 | 6.42 |
| CDY32382 | Canola | nucleus | 2.98 | 6.38 |
| AT4G00390.1 | Thale cress | nucleus | 3.81 | 6.32 |
| CDX94469 | Canola | nucleus | 1.32 | 5.93 |
| Bra021317.1-P | Field mustard | nucleus | 2.98 | 5.84 |
| CDX97966 | Canola | nucleus | 3.15 | 5.79 |
| Bra034488.1-P | Field mustard | nucleus | 2.98 | 5.59 |
| Bra013873.1-P | Field mustard | nucleus | 3.31 | 5.59 |
| AT1G61730.1 | Thale cress | nucleus | 3.48 | 5.59 |
| CDY68087 | Canola | nucleus | 2.81 | 5.52 |
| CDX99698 | Canola | nucleus | 2.81 | 5.52 |
| CDX89436 | Canola | nucleus | 3.15 | 5.4 |
| Bra019847.1-P | Field mustard | nucleus | 3.15 | 5.34 |
| VIT_12s0059g02690.t01 | Wine grape | nucleus | 3.81 | 5.28 |
| CDY49787 | Canola | nucleus | 3.15 | 5.12 |
| AT1G11510.1 | Thale cress | nucleus | 2.81 | 4.83 |
| Bra032717.1-P | Field mustard | nucleus | 2.65 | 4.82 |
| CDY01140 | Canola | nucleus | 2.15 | 4.71 |
| Bra019183.1-P | Field mustard | nucleus | 2.81 | 4.64 |
| CDY11061 | Canola | nucleus | 2.65 | 4.38 |
| CDX92682 | Canola | nucleus | 2.65 | 4.32 |
| Bra038583.1-P | Field mustard | nucleus | 2.98 | 4.3 |
| Bra025445.1-P | Field mustard | nucleus | 2.15 | 4.23 |
| AT4G00250.1 | Thale cress | nucleus | 2.15 | 4.08 |
| CDY26346 | Canola | nucleus | 2.65 | 3.88 |
| Zm00001d005865_P001 | Maize | nucleus | 2.81 | 3.88 |
| AT4G00238.1 | Thale cress | nucleus | 2.15 | 3.77 |
| AT4G01260.1 | Thale cress | nucleus | 1.99 | 3.69 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 2.98 | 3.67 |
| AT1G55950.1 | Thale cress | mitochondrion | 1.32 | 3.65 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 2.81 | 3.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 2.32 | 3.4 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 2.65 | 3.27 |
| Zm00001d020688_P001 | Maize | nucleus | 2.32 | 3.27 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 2.48 | 3.06 |
| Os08t0467600-00 | Rice | nucleus | 2.65 | 3.01 |
| KXG25358 | Sorghum | nucleus, plastid | 2.15 | 2.99 |
| EER96833 | Sorghum | nucleus | 1.82 | 2.49 |
| AT4G00610.1 | Thale cress | plastid | 1.32 | 2.44 |
| AT2G01370.1 | Thale cress | mitochondrion | 0.83 | 1.98 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 1.32 | 1.75 |
| AT1G66420.1 | Thale cress | nucleus | 0.66 | 1.42 |
| CDY12911 | Canola | nucleus | 0.17 | 0.52 |
| Os09t0451700-00 | Rice | nucleus | 0.0 | 0.0 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 0.0 | 0.0 |
| AT4G00130.1 | Thale cress | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_00s0999g00010 | EnsemblPlants:VIT_00s0999g00010.t01 | EnsemblPlantsGene:VIT_00s0999g00010 | EntrezGene:100852908 | EntrezGene:LOC100852908 | ncoils:Coil |
| RefSeq:XP_003635511 | RefSeq:XP_003635511.1 | SEG:seg | UniParc:UPI0001BE2608 | wikigene:100852908 | wikigene:LOC100852908 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:37472567..37474419
Molecular Weight (calculated)
20471.8 Da
IEP (calculated)
4.298
GRAVY (calculated)
-0.488
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKRPPPAE DPPAPSSTSE EEEENEENEE NEEEEEEEEE SSPEESSEEE EEGEENKSTV LTPPPAVDKK ASSNKLVATT PAKSTPQSSS EDEEDGSESE
101: SESDSPPKSR RSSRGADPTI RPIATKPMEE TPKSKKARSK PGVSVTPSPV KSSPVKPSNS KRPGEIGLER KESKRAXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXSTRYYTI
601: YRIN
101: SESDSPPKSR RSSRGADPTI RPIATKPMEE TPKSKKARSK PGVSVTPSPV KSSPVKPSNS KRPGEIGLER KESKRAXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXSTRYYTI
601: YRIN
001: MAPKQPEKIE NPPMASAPSS EKESGSTENE YGSSGEETNS SDDEHEEARD NVISTPLSFG QELVSFFKVE NLTYLGIDEA KWIAYWDMVK DGPKKREVEK
101: QLKKMLAMQM ELFMMRTGFT KEVATVLFKQ DNASSSGK
101: QLKKMLAMQM ELFMMRTGFT KEVATVLFKQ DNASSSGK
Arabidopsis Description
Mediator-associated-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FMY2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.