Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12911 | Canola | nucleus | 52.07 | 97.93 |
| Bra027078.1-P | Field mustard | nucleus | 82.37 | 78.68 |
| CDY32382 | Canola | nucleus | 49.31 | 63.48 |
| CDY07275 | Canola | nucleus | 56.47 | 57.26 |
| AT1G61730.1 | Thale cress | nucleus | 48.48 | 46.81 |
| CDY52323 | Canola | nucleus | 21.76 | 46.75 |
| CDY68087 | Canola | nucleus | 36.64 | 43.18 |
| CDY01140 | Canola | nucleus | 30.85 | 40.58 |
| AT4G00390.1 | Thale cress | nucleus | 38.57 | 38.46 |
| CDY18747 | Canola | nucleus | 35.54 | 36.13 |
| CDX99698 | Canola | nucleus | 30.58 | 36.04 |
| CDX97966 | Canola | nucleus | 30.85 | 34.15 |
| CDY27657 | Canola | nucleus | 26.45 | 31.58 |
| CDY49787 | Canola | nucleus | 30.58 | 29.92 |
| CDX89436 | Canola | nucleus | 24.79 | 25.57 |
| CDY11061 | Canola | nucleus | 25.62 | 25.48 |
| CDX92682 | Canola | nucleus | 25.62 | 25.14 |
| KRH10688 | Soybean | nucleus | 27.27 | 22.65 |
| KRH21647 | Soybean | nucleus | 27.27 | 22.1 |
| CDY26346 | Canola | nucleus | 24.52 | 21.6 |
| CDX94469 | Canola | nucleus | 7.99 | 21.48 |
| Os09t0451700-00 | Rice | nucleus | 10.47 | 21.11 |
| KRH57853 | Soybean | nucleus | 20.66 | 19.38 |
| PGSC0003DMT400079215 | Potato | nucleus | 20.39 | 18.55 |
| CDY21105 | Canola | nucleus | 16.8 | 17.13 |
| CDY00009 | Canola | nucleus | 18.46 | 17.01 |
| CDY30023 | Canola | nucleus | 17.08 | 15.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.36 | 15.29 |
| CDX80681 | Canola | nucleus | 17.08 | 15.09 |
| Zm00001d005865_P001 | Maize | nucleus | 17.91 | 14.84 |
| CDY41910 | Canola | nucleus | 17.08 | 14.59 |
| CDY50767 | Canola | nucleus | 16.25 | 14.57 |
| Zm00001d020688_P001 | Maize | nucleus | 17.08 | 14.49 |
| EER96833 | Sorghum | nucleus | 17.36 | 14.25 |
| KXG25358 | Sorghum | nucleus, plastid | 15.98 | 13.33 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 16.8 | 12.45 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 16.8 | 12.45 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 16.8 | 12.45 |
| CDY68986 | Canola | nucleus | 11.57 | 12.39 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 16.53 | 12.27 |
| Os08t0467600-00 | Rice | nucleus | 17.08 | 11.65 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 14.33 | 11.4 |
| CDX86188 | Canola | cytosol | 17.36 | 10.47 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 7.71 | 4.64 |
Protein Annotations
| EnsemblPlants:CDY61958 | EnsemblPlantsGene:GSBRNA2T00034633001 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 | PFAM:PF04504 |
| ProteinID:CDY61958 | ProteinID:CDY61958.1 | SEG:seg | UniParc:UPI0004EF22EA | UniProt:A0A078J675 | MapMan:15.5.28 |
Description
BnaCnng38830DBnaCnng38830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J675]
Coordinates
chrLK034069:-:30441..31580
Molecular Weight (calculated)
40350.9 Da
IEP (calculated)
5.125
GRAVY (calculated)
-1.061
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKKRNPLED PPAASSSDEE EVESSAEEEE EEDDNSSSEE EEEDDPKPPP SSSAVTIAVP GKPTATLPAD SESGSETETD SESEPEQPTN KGSGKAVLTA
101: KKDKDTPPPP PVALALPAKS GAKRPSTEGP SKETNSKRVK KDEEKREDSK KPAAFQRLWT EEDEIAVLQG MIDFKKDTGK SPYDDTNVYY DYIKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EKPSFTKPHD QKSYRLCQYI WGPDGMGLES AVKSNGASKK SQKKTKKLDS VKQELSFGAS PNGKTHDWFD NSFLVQGIAG
301: FGVDEHHVKQ RWSLVPVETK KKVEEKLKLL QAKEIEFVLQ KTEVLHEVTT MIAEASKNKP LDI
101: KKDKDTPPPP PVALALPAKS GAKRPSTEGP SKETNSKRVK KDEEKREDSK KPAAFQRLWT EEDEIAVLQG MIDFKKDTGK SPYDDTNVYY DYIKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EKPSFTKPHD QKSYRLCQYI WGPDGMGLES AVKSNGASKK SQKKTKKLDS VKQELSFGAS PNGKTHDWFD NSFLVQGIAG
301: FGVDEHHVKQ RWSLVPVETK KKVEEKLKLL QAKEIEFVLQ KTEVLHEVTT MIAEASKNKP LDI
001: MTKKLNPLED PPTATSSDED DVETSEAGEA SDDSSSSEED VPIKIRIKSP SATTAAAPPA KSTAVSTAAD SDSGSETETD SDSESTNPPN SGSGKTIALN
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
101: TVNLKKKEDP TSSSATLALP AMKSGTKRPA SEAAATTSTK RVKKDEESVK KPGGFQRLWS EEDEILVLQG MIDFKADTGK SPYVDTNAFY DFLKKSISFE
201: VSKNQFMDKI RSLRKKYIGK EGRNEPSFVK AHDKKAFELS KFIWGPKGIA LDSNVKSNGV SKKSVAKKKI DSVKQELVFA GGSSTNGKKV EEDGGDDGCD
301: WFDNSSLVRM IASLGVDEYY VKQQWSLVSV ESKKIVEEKY KLLQAKELEF VLEKTKFLNE VASMFVEASK NKPLDT
Arabidopsis Description
Probable transcription factor At1g61730 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYA9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.