Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- endoplasmic reticulum 1
- cytosol 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0451700-00 | Rice | nucleus | 12.28 | 27.22 |
| CDX99698 | Canola | nucleus | 19.8 | 25.65 |
| CDY27657 | Canola | nucleus | 19.05 | 25.0 |
| CDX97966 | Canola | nucleus | 20.55 | 25.0 |
| Bra025445.1-P | Field mustard | nucleus | 18.8 | 24.43 |
| AT4G25210.1 | Thale cress | nucleus | 22.06 | 23.91 |
| CDY12911 | Canola | nucleus | 11.28 | 23.32 |
| CDY49787 | Canola | nucleus | 21.55 | 23.18 |
| CDY32382 | Canola | nucleus | 16.29 | 23.05 |
| Bra019847.1-P | Field mustard | nucleus | 20.55 | 23.03 |
| KRH21647 | Soybean | nucleus | 25.81 | 22.99 |
| Bra013873.1-P | Field mustard | nucleus | 20.55 | 22.91 |
| AT4G01260.1 | Thale cress | nucleus | 18.55 | 22.77 |
| KRH10688 | Soybean | nucleus | 24.81 | 22.65 |
| KRH57853 | Soybean | nucleus | 21.8 | 22.48 |
| CDX92682 | Canola | nucleus | 20.8 | 22.43 |
| AT1G61730.1 | Thale cress | nucleus | 21.05 | 22.34 |
| Bra031402.1-P | Field mustard | nucleus | 18.55 | 22.29 |
| CDX89436 | Canola | nucleus | 19.3 | 21.88 |
| Bra021317.1-P | Field mustard | nucleus | 16.79 | 21.75 |
| Bra034488.1-P | Field mustard | nucleus | 17.54 | 21.74 |
| Bra032717.1-P | Field mustard | nucleus | 18.05 | 21.69 |
| AT4G00130.1 | Thale cress | mitochondrion | 10.53 | 21.65 |
| CDY11061 | Canola | nucleus | 19.8 | 21.64 |
| VIT_00s0868g00010.t01 | Wine grape | nucleus | 23.56 | 21.51 |
| AT4G00390.1 | Thale cress | nucleus | 19.55 | 21.43 |
| CDY52323 | Canola | nucleus | 9.02 | 21.3 |
| CDY07275 | Canola | nucleus | 18.8 | 20.95 |
| CDY68087 | Canola | nucleus | 16.04 | 20.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.3 | 20.63 |
| AT1G44810.1 | Thale cress | nucleus | 15.29 | 20.61 |
| CDY61958 | Canola | nucleus | 18.55 | 20.39 |
| Bra019183.1-P | Field mustard | nucleus | 18.55 | 20.22 |
| AT1G11510.1 | Thale cress | nucleus | 17.79 | 20.17 |
| CDY18747 | Canola | nucleus | 18.05 | 20.17 |
| Bra027078.1-P | Field mustard | nucleus | 19.05 | 20.0 |
| AT2G01370.1 | Thale cress | mitochondrion | 12.53 | 19.84 |
| CDY01140 | Canola | nucleus | 13.28 | 19.2 |
| AT4G00250.1 | Thale cress | nucleus | 15.04 | 18.81 |
| AT1G66420.1 | Thale cress | nucleus | 13.03 | 18.44 |
| EER96833 | Sorghum | nucleus | 20.3 | 18.33 |
| AT4G00610.1 | Thale cress | plastid | 15.04 | 18.29 |
| AT4G00238.1 | Thale cress | nucleus | 15.79 | 18.26 |
| CDY26346 | Canola | nucleus | 18.8 | 18.2 |
| Bra038583.1-P | Field mustard | nucleus | 19.05 | 18.14 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 22.06 | 17.96 |
| CDX94469 | Canola | nucleus | 6.02 | 17.78 |
| Zm00001d020688_P001 | Maize | nucleus | 19.05 | 17.76 |
| Zm00001d005865_P001 | Maize | nucleus | 19.05 | 17.35 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 20.3 | 16.53 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 19.8 | 16.16 |
| KXG25358 | Sorghum | nucleus, plastid | 17.54 | 16.09 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 19.55 | 15.92 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 18.05 | 15.79 |
| AT1G55950.1 | Thale cress | mitochondrion | 8.52 | 15.53 |
| PGSC0003DMT400009206 | Potato | nucleus | 16.04 | 15.24 |
| Os08t0467600-00 | Rice | nucleus | 18.3 | 13.72 |
| PGSC0003DMT400057863 | Potato | nucleus | 15.04 | 13.42 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400079215 | EnsemblPlantsGene:PGSC0003DMG400030831 | EntrezGene:102584580 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | ncoils:Coil | PANTHER:PTHR31662 |
| PANTHER:PTHR31662:SF1 | PFAM:PF04504 | PGSC:PGSC0003DMG400030831 | RefSeq:XP_006363288.1 | SEG:seg | UniParc:UPI0002952FCA |
| UniProt:M1D1F7 | MapMan:15.5.28 | : | : | : | : |
Description
Transcription regulator [Source:PGSC_GENE;Acc:PGSC0003DMG400030831]
Coordinates
chr4:-:64060773..64062295
Molecular Weight (calculated)
43833.3 Da
IEP (calculated)
5.757
GRAVY (calculated)
-1.050
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKNRPEKEE EEESGEEMEV SSPGNADTES GSGSGSGSES ESESEPEQEQ PPKKPPVSAP KKPQPQDDSS SSTEEESDSE SEPDPETQKP NPVVKPIASK
101: PMDEPKKAAP IVEKKPKSKA DATAKLTSPK KSTAVVGAKR PVDDGEAKES KRSKKKPEKQ IETPVSKTPT DDVKRQLFQR LWSEDDEIAI LKGMTDYRSK
201: KKADPVADLS AFHEFIKKSL HVDVSKAQLQ DKIRRLKKKY ENNAGKEKKG KERTFSKPHE QKAYELSQKV WGKEKTDKVP VEVVKVENVT ASKGRSNSGG
301: EDNGVLDVVK EEKLSAEVER TVEVTPNLNL TSCGGSVAAL EKWLEEFSGL LSIEKLDEIK KKSTSLQVAE AGLCLRRVNL IAEQGELMRK AMNASGIDI
101: PMDEPKKAAP IVEKKPKSKA DATAKLTSPK KSTAVVGAKR PVDDGEAKES KRSKKKPEKQ IETPVSKTPT DDVKRQLFQR LWSEDDEIAI LKGMTDYRSK
201: KKADPVADLS AFHEFIKKSL HVDVSKAQLQ DKIRRLKKKY ENNAGKEKKG KERTFSKPHE QKAYELSQKV WGKEKTDKVP VEVVKVENVT ASKGRSNSGG
301: EDNGVLDVVK EEKLSAEVER TVEVTPNLNL TSCGGSVAAL EKWLEEFSGL LSIEKLDEIK KKSTSLQVAE AGLCLRRVNL IAEQGELMRK AMNASGIDI
001: MTKKLDPPTA PSSDEDDVET SEDDSSSSEE DEPIKSLPAT TAAAPAKSTA VSAATPAKST SVSAAAPSKS TAVSAAADSD SGSESETDSD SESTDPPKSG
101: SGKTIASKKK DDPSSSTATL ALPAVKSGAK RAASEAATTS TKRVKKDEES VKKPALFQRL WSDDDEISML QGMIDYHADT GKSPSADTNA FYEFQKKSIS
201: FEVSKSQFSD KVRSLRKKYR AKEGKDEPRF VKAHDKKAFE LSKFIWGPKG IALDSNAKSN GVSKKSASKT KEKLDSVKQD LAFVGVSSTN GDDWFEKSSL
301: ARMIAGSGID EYYVRQKWSS FTLETKKIVE EKFQLMQAKE LEAMLDKSVR LTDLTSYFVD ASKN
101: SGKTIASKKK DDPSSSTATL ALPAVKSGAK RAASEAATTS TKRVKKDEES VKKPALFQRL WSDDDEISML QGMIDYHADT GKSPSADTNA FYEFQKKSIS
201: FEVSKSQFSD KVRSLRKKYR AKEGKDEPRF VKAHDKKAFE LSKFIWGPKG IALDSNAKSN GVSKKSASKT KEKLDSVKQD LAFVGVSSTN GDDWFEKSSL
301: ARMIAGSGID EYYVRQKWSS FTLETKKIVE EKFQLMQAKE LEAMLDKSVR LTDLTSYFVD ASKN
Arabidopsis Description
Probable transcription factor At4g00390 [Source:UniProtKB/Swiss-Prot;Acc:O23063]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.