Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0451700-00 | Rice | nucleus | 12.38 | 28.33 |
| EER96833 | Sorghum | nucleus | 25.49 | 23.76 |
| CDX94469 | Canola | nucleus | 7.77 | 23.7 |
| Zm00001d020688_P001 | Maize | nucleus | 24.03 | 23.13 |
| Zm00001d005865_P001 | Maize | nucleus | 24.51 | 23.06 |
| CDY18747 | Canola | nucleus | 19.42 | 22.41 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 25.97 | 21.84 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 25.97 | 21.84 |
| Bra025445.1-P | Field mustard | nucleus | 16.26 | 21.82 |
| Bra031402.1-P | Field mustard | nucleus | 17.48 | 21.69 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 25.49 | 21.43 |
| PGSC0003DMT400079215 | Potato | nucleus | 20.63 | 21.3 |
| Bra013873.1-P | Field mustard | nucleus | 18.45 | 21.23 |
| AT4G00130.1 | Thale cress | mitochondrion | 9.95 | 21.13 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 25.0 | 21.06 |
| KRH21647 | Soybean | nucleus | 22.82 | 20.98 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 23.06 | 20.83 |
| CDY11061 | Canola | nucleus | 18.45 | 20.82 |
| Bra019183.1-P | Field mustard | nucleus | 18.45 | 20.77 |
| CDX89436 | Canola | nucleus | 17.72 | 20.74 |
| VIT_12s0059g02690.t01 | Wine grape | nucleus | 21.84 | 20.64 |
| KRH10688 | Soybean | nucleus | 21.84 | 20.59 |
| CDY32382 | Canola | nucleus | 14.08 | 20.57 |
| AT4G25210.1 | Thale cress | nucleus | 18.2 | 20.38 |
| CDY12911 | Canola | nucleus | 9.47 | 20.21 |
| CDY52323 | Canola | nucleus | 8.25 | 20.12 |
| CDY27657 | Canola | nucleus | 14.81 | 20.07 |
| KXG25358 | Sorghum | nucleus, plastid | 21.12 | 20.0 |
| CDX92682 | Canola | nucleus | 17.96 | 20.0 |
| KRH57853 | Soybean | nucleus | 18.69 | 19.9 |
| CDX99698 | Canola | nucleus | 14.56 | 19.48 |
| Bra021317.1-P | Field mustard | nucleus | 14.32 | 19.16 |
| CDY68087 | Canola | nucleus | 14.32 | 19.16 |
| VIT_00s0868g00010.t01 | Wine grape | nucleus | 20.15 | 18.99 |
| CDY01140 | Canola | nucleus | 12.62 | 18.84 |
| AT2G01370.1 | Thale cress | mitochondrion | 11.41 | 18.65 |
| AT1G66420.1 | Thale cress | nucleus | 12.62 | 18.44 |
| AT1G44810.1 | Thale cress | nucleus | 12.86 | 17.91 |
| AT1G11510.1 | Thale cress | nucleus | 15.29 | 17.9 |
| CDY07275 | Canola | nucleus | 15.53 | 17.88 |
| GSMUA_Achr7P02150_001 | Banana | cytosol | 4.61 | 17.76 |
| CDY26346 | Canola | nucleus | 17.72 | 17.72 |
| Bra034488.1-P | Field mustard | nucleus | 13.84 | 17.7 |
| Os08t0467600-00 | Rice | nucleus | 22.82 | 17.67 |
| Bra038583.1-P | Field mustard | nucleus | 17.96 | 17.66 |
| Bra027078.1-P | Field mustard | nucleus | 16.26 | 17.63 |
| Bra032717.1-P | Field mustard | nucleus | 14.08 | 17.47 |
| CDY61958 | Canola | nucleus | 15.29 | 17.36 |
| AT4G00390.1 | Thale cress | nucleus | 15.05 | 17.03 |
| CDX97966 | Canola | nucleus | 13.35 | 16.77 |
| AT1G61730.1 | Thale cress | nucleus | 15.29 | 16.76 |
| AT4G01260.1 | Thale cress | nucleus | 13.11 | 16.62 |
| AT4G00250.1 | Thale cress | nucleus | 12.14 | 15.67 |
| AT4G00238.1 | Thale cress | nucleus | 13.11 | 15.65 |
| Bra019847.1-P | Field mustard | nucleus | 13.35 | 15.45 |
| CDY49787 | Canola | nucleus | 13.84 | 15.36 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 16.02 | 15.31 |
| AT4G00610.1 | Thale cress | plastid | 12.14 | 15.24 |
| AT1G55950.1 | Thale cress | mitochondrion | 8.01 | 15.07 |
| GSMUA_Achr10P... | Banana | mitochondrion | 15.29 | 14.89 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 3.4 | 2.32 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP15790_001 | EnsemblPlants:GSMUA_AchrUn_randomT15790_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG15790_001 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF15 |
| PFAM:PF04504 | SEG:seg | SUPFAM:SSF101447 | UniParc:UPI000295D296 | UniProt:M0U9I8 | MapMan:15.5.28 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG15790_001]
Coordinates
chrchrUn_random:+:75218114..75221749
Molecular Weight (calculated)
45877.0 Da
IEP (calculated)
5.118
GRAVY (calculated)
-1.118
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPSKHPSAA TSSHDGEEDD DDSSNEEDGQ RNKHQGDNGS EEEEDDDDEG SSDEGSDSDD ANTMNKPLPP PPPPPPPPPK PQFQPLPKPT PEPSDSGSSG
101: DSDSESDSSD DAPVTPASRP SRAVDPSIKP INTKPMDTPN KPSKQANSPA PLQDRESLKR KHDVVERSEL DNHGGQKRQL FQRLWSLDNE IVLLKGLVEY
201: RSKKGTVAAS AHDMEDLRNF IKGSFQTDFS NTQLADKVRR LKKKFETNNA RAKNGADPTF TKPHEQDGYK LSKKVWGVNR ITSEHLDANS ADSEDNEESE
301: SEMMNIRKSN EQQLTSLVVS KCHDAIVCES GDIVRVKIQF PYLWETVTKM ADEYLCGIAI KRALEMVDVA KAKSMEEKLK KLKTTQMRQH LRRIDLNKET
401: VKLILDAIGR SK
101: DSDSESDSSD DAPVTPASRP SRAVDPSIKP INTKPMDTPN KPSKQANSPA PLQDRESLKR KHDVVERSEL DNHGGQKRQL FQRLWSLDNE IVLLKGLVEY
201: RSKKGTVAAS AHDMEDLRNF IKGSFQTDFS NTQLADKVRR LKKKFETNNA RAKNGADPTF TKPHEQDGYK LSKKVWGVNR ITSEHLDANS ADSEDNEESE
301: SEMMNIRKSN EQQLTSLVVS KCHDAIVCES GDIVRVKIQF PYLWETVTKM ADEYLCGIAI KRALEMVDVA KAKSMEEKLK KLKTTQMRQH LRRIDLNKET
401: VKLILDAIGR SK
001: MSRRFNPLED PPSASSSDEE GKEIARNSSS DDEDDVSSEN PSPLKTTLDA VSDSESGSDE ETDSDSELEK KKDQVVTNPV DVKRAKKVKT SEKSGAKRSL
101: EVDEAAVSMD VKRAKKVSGE EEKKKSGGGG EETKKTYFQR LWTEDDEIVV LQGLIDDKKD TGVSNTNKVY ELVKKSISFD VSKNQLMEKL RALKKKYENN
201: LGKAKDGVEP TFVKPHDRKA FELSKLVWGG IRMALASGMK SNEKSKKSSK FESVKHELDS SLPNSKNNCE DEVMDEGEVS FTKSSLVRSI VGLGMDELTA
301: QQGLSKLASK DMKRFYEQWK AMQAREFEFF LQKHGFLFEV LSKISEAFGS NA
101: EVDEAAVSMD VKRAKKVSGE EEKKKSGGGG EETKKTYFQR LWTEDDEIVV LQGLIDDKKD TGVSNTNKVY ELVKKSISFD VSKNQLMEKL RALKKKYENN
201: LGKAKDGVEP TFVKPHDRKA FELSKLVWGG IRMALASGMK SNEKSKKSSK FESVKHELDS SLPNSKNNCE DEVMDEGEVS FTKSSLVRSI VGLGMDELTA
301: QQGLSKLASK DMKRFYEQWK AMQAREFEFF LQKHGFLFEV LSKISEAFGS NA
Arabidopsis Description
Probable transcription factor At1g11510 [Source:UniProtKB/Swiss-Prot;Acc:C0SUU6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.