Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025445.1-P | Field mustard | nucleus | 73.68 | 72.96 |
| CDX99698 | Canola | nucleus | 55.26 | 54.55 |
| CDY52323 | Canola | nucleus | 20.39 | 36.69 |
| CDX97966 | Canola | nucleus | 38.82 | 35.98 |
| CDY32382 | Canola | nucleus | 30.59 | 32.98 |
| AT1G11510.1 | Thale cress | nucleus | 38.16 | 32.95 |
| CDY12911 | Canola | nucleus | 20.07 | 31.61 |
| CDY49787 | Canola | nucleus | 38.49 | 31.54 |
| CDY01140 | Canola | nucleus | 28.29 | 31.16 |
| CDY26346 | Canola | nucleus | 37.83 | 27.91 |
| CDY68087 | Canola | nucleus | 27.96 | 27.6 |
| CDY18747 | Canola | nucleus | 32.24 | 27.45 |
| CDY07275 | Canola | nucleus | 31.25 | 26.54 |
| CDY61958 | Canola | nucleus | 31.58 | 26.45 |
| CDX89436 | Canola | nucleus | 26.97 | 23.3 |
| CDY11061 | Canola | nucleus | 27.3 | 22.74 |
| Os09t0451700-00 | Rice | nucleus | 12.5 | 21.11 |
| CDX92682 | Canola | nucleus | 25.66 | 21.08 |
| KRH10688 | Soybean | nucleus | 28.29 | 19.68 |
| CDX94469 | Canola | nucleus | 8.55 | 19.26 |
| PGSC0003DMT400079215 | Potato | nucleus | 25.0 | 19.05 |
| KRH21647 | Soybean | nucleus | 27.96 | 18.97 |
| KRH57853 | Soybean | nucleus | 24.01 | 18.86 |
| CDY00009 | Canola | nucleus | 20.72 | 15.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.07 | 14.81 |
| CDX80681 | Canola | nucleus | 18.75 | 13.87 |
| CDY41910 | Canola | nucleus | 19.08 | 13.65 |
| CDY50767 | Canola | nucleus | 18.09 | 13.58 |
| CDY21105 | Canola | nucleus | 15.79 | 13.48 |
| CDY30023 | Canola | nucleus | 16.12 | 12.16 |
| Zm00001d049991_P001 | Maize | nucleus, plastid | 17.76 | 11.84 |
| KXG25358 | Sorghum | nucleus, plastid | 15.79 | 11.03 |
| CDY68986 | Canola | nucleus | 12.17 | 10.91 |
| TraesCS5A01G234500.1 | Wheat | nucleus | 16.45 | 10.2 |
| TraesCS5D01G241400.1 | Wheat | nucleus | 16.45 | 10.2 |
| EER96833 | Sorghum | nucleus | 14.8 | 10.18 |
| Zm00001d020688_P001 | Maize | nucleus | 14.14 | 10.05 |
| Zm00001d005865_P001 | Maize | nucleus | 14.14 | 9.82 |
| CDX86188 | Canola | cytosol | 19.41 | 9.8 |
| TraesCS5B01G233000.1 | Wheat | nucleus | 15.13 | 9.41 |
| HORVU5Hr1G067630.1 | Barley | nucleus | 15.13 | 9.39 |
| Os08t0467600-00 | Rice | nucleus | 16.12 | 9.21 |
| VIT_00s0999g00010.t01 | Wine grape | cytosol, nucleus | 6.58 | 3.31 |
Protein Annotations
| EnsemblPlants:CDY27657 | EnsemblPlantsGene:GSBRNA2T00038423001 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF1 | PFAM:PF04504 |
| ProteinID:CDY27657 | ProteinID:CDY27657.1 | SEG:seg | UniParc:UPI0004EDD78F | UniProt:A0A078GR76 | MapMan:15.5.28 |
Description
BnaUnng00070DBnaUnng00070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR76]
Coordinates
chrLK032208:-:48036..48950
Molecular Weight (calculated)
34254.1 Da
IEP (calculated)
5.096
GRAVY (calculated)
-0.931
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGKLLKKLE DPPIASSSSE EEEDEDAVAN SSSEEEEEEE AEPVAKPLVK PPANSIKVET SSKPETKKKR SSETDEVEAK RVKRVSGEDD KKSTGEEETK
101: KSCFQRVWTE EDEIAVLQGI IDFKNETGSS PYEDKNALYD LVKKSVSFDV TKTQFMEKIR ASKKKFENNL GRGKKKGKDP SFSKAHDRKA FDLAKLVWGD
201: NGIMALEPLS AVKSKKVEPA VKKQEEPVAV MNQEFVPIVD LVARFGVDDL AAKQGWSRLS SKDRERFEEQ WKELQLKEFK LYSQKSGFIN EVVTKMAEAS
301: QPDH
101: KSCFQRVWTE EDEIAVLQGI IDFKNETGSS PYEDKNALYD LVKKSVSFDV TKTQFMEKIR ASKKKFENNL GRGKKKGKDP SFSKAHDRKA FDLAKLVWGD
201: NGIMALEPLS AVKSKKVEPA VKKQEEPVAV MNQEFVPIVD LVARFGVDDL AAKQGWSRLS SKDRERFEEQ WKELQLKEFK LYSQKSGFIN EVVTKMAEAS
301: QPDH
001: MSRRFNPLED PPSASSSDEE GKEIARNSSS DDEDDVSSEN PSPLKTTLDA VSDSESGSDE ETDSDSELEK KKDQVVTNPV DVKRAKKVKT SEKSGAKRSL
101: EVDEAAVSMD VKRAKKVSGE EEKKKSGGGG EETKKTYFQR LWTEDDEIVV LQGLIDDKKD TGVSNTNKVY ELVKKSISFD VSKNQLMEKL RALKKKYENN
201: LGKAKDGVEP TFVKPHDRKA FELSKLVWGG IRMALASGMK SNEKSKKSSK FESVKHELDS SLPNSKNNCE DEVMDEGEVS FTKSSLVRSI VGLGMDELTA
301: QQGLSKLASK DMKRFYEQWK AMQAREFEFF LQKHGFLFEV LSKISEAFGS NA
101: EVDEAAVSMD VKRAKKVSGE EEKKKSGGGG EETKKTYFQR LWTEDDEIVV LQGLIDDKKD TGVSNTNKVY ELVKKSISFD VSKNQLMEKL RALKKKYENN
201: LGKAKDGVEP TFVKPHDRKA FELSKLVWGG IRMALASGMK SNEKSKKSSK FESVKHELDS SLPNSKNNCE DEVMDEGEVS FTKSSLVRSI VGLGMDELTA
301: QQGLSKLASK DMKRFYEQWK AMQAREFEFF LQKHGFLFEV LSKISEAFGS NA
Arabidopsis Description
Probable transcription factor At1g11510 [Source:UniProtKB/Swiss-Prot;Acc:C0SUU6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.