Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040116.1-P | Field mustard | nucleus | 78.37 | 75.2 |
| CDY30023 | Canola | nucleus | 85.11 | 75.19 |
| CDY50767 | Canola | nucleus | 64.61 | 56.79 |
| CDY41910 | Canola | nucleus | 64.89 | 54.35 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 9.27 | 53.23 |
| CDX80681 | Canola | nucleus | 58.15 | 50.37 |
| CDY00009 | Canola | nucleus | 53.37 | 48.22 |
| AT3G04930.1 | Thale cress | nucleus | 61.24 | 47.81 |
| CDY68986 | Canola | nucleus | 33.43 | 35.1 |
| CDX86188 | Canola | cytosol | 57.3 | 33.89 |
| Os07t0636100-01 | Rice | nucleus | 21.63 | 30.68 |
| TraesCS3B01G200500.1 | Wheat | nucleus | 31.18 | 29.52 |
| Zm00001d022266_P001 | Maize | nucleus | 30.06 | 28.61 |
| TraesCS2A01G151700.1 | Wheat | nucleus | 30.06 | 28.31 |
| KRG92748 | Soybean | cytosol | 28.09 | 28.01 |
| TraesCS4B01G159600.1 | Wheat | nucleus | 27.25 | 27.95 |
| Zm00001d006945_P001 | Maize | nucleus | 28.93 | 27.91 |
| TraesCS2B01G176900.1 | Wheat | nucleus | 29.49 | 27.85 |
| TraesCS3D01G176400.1 | Wheat | nucleus | 30.9 | 27.64 |
| HORVU4Hr1G045570.1 | Barley | nucleus | 26.97 | 27.59 |
| EER97613 | Sorghum | nucleus | 28.93 | 27.47 |
| TraesCS4D01G163600.1 | Wheat | nucleus | 26.69 | 27.38 |
| HORVU5Hr1G051570.1 | Barley | plastid | 26.4 | 27.33 |
| Zm00001d040254_P001 | Maize | nucleus | 30.62 | 27.32 |
| TraesCS4A01G138100.1 | Wheat | nucleus | 26.69 | 27.3 |
| TraesCS2D01G156800.1 | Wheat | nucleus | 28.93 | 27.25 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 32.3 | 26.68 |
| KRH34056 | Soybean | nucleus | 28.09 | 26.67 |
| HORVU2Hr1G027390.1 | Barley | plastid | 27.81 | 26.47 |
| EER92218 | Sorghum | nucleus | 27.53 | 25.99 |
| EES02686 | Sorghum | nucleus | 29.49 | 25.99 |
| TraesCS3A01G165200.1 | Wheat | nucleus | 28.93 | 25.88 |
| GSMUA_Achr10P... | Banana | mitochondrion | 30.34 | 25.53 |
| HORVU3Hr1G034150.3 | Barley | nucleus | 28.93 | 25.5 |
| EES02423 | Sorghum | nucleus | 28.93 | 25.37 |
| Os01t0249900-01 | Rice | plastid | 21.91 | 25.0 |
| Zm00001d047421_P001 | Maize | nucleus | 26.12 | 24.8 |
| Zm00001d029287_P001 | Maize | nucleus | 26.4 | 24.54 |
| Os03t0370250-01 | Rice | cytosol | 27.25 | 23.49 |
| CDY52323 | Canola | nucleus | 10.96 | 23.08 |
| CDY32382 | Canola | nucleus | 16.29 | 20.57 |
| CDX89436 | Canola | nucleus | 19.38 | 19.6 |
| CDY18747 | Canola | nucleus | 19.38 | 19.33 |
| CDX97966 | Canola | nucleus | 16.85 | 18.29 |
| CDY12911 | Canola | nucleus | 9.83 | 18.13 |
| CDY11061 | Canola | nucleus | 18.26 | 17.81 |
| CDY01140 | Canola | nucleus | 13.48 | 17.39 |
| CDY07275 | Canola | nucleus | 17.42 | 17.32 |
| CDX92682 | Canola | nucleus | 17.7 | 17.03 |
| CDY68087 | Canola | nucleus | 14.61 | 16.88 |
| CDY61958 | Canola | nucleus | 17.13 | 16.8 |
| CDY49787 | Canola | nucleus | 17.13 | 16.44 |
| CDX99698 | Canola | nucleus | 14.04 | 16.23 |
| CDY27657 | Canola | nucleus | 13.48 | 15.79 |
| CDY26346 | Canola | nucleus | 17.98 | 15.53 |
| CDX94469 | Canola | nucleus | 4.78 | 12.59 |
Protein Annotations
| EnsemblPlants:CDY21105 | EnsemblPlantsGene:GSBRNA2T00015283001 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:GEBP | ncoils:Coil | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF6 |
| PFAM:PF04504 | ProteinID:CDY21105 | ProteinID:CDY21105.1 | SEG:seg | UniParc:UPI0004EEDDFD | UniProt:A0A078G3Q5 |
| MapMan:15.5.28 | : | : | : | : | : |
Description
BnaA01g33360DBnaA01g33360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3Q5]
Coordinates
chrLK032116:+:16814..17884
Molecular Weight (calculated)
39682.8 Da
IEP (calculated)
6.531
GRAVY (calculated)
-0.669
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSDHRVAVF SIDSPDHEGG ESDTDDDVAL PETNDDLNSP SNVTVALPSG SSAVPVSVIP ADSSPKWHHR TTEIIHRRRQ QPPPPPPAID DSRRLFQRLW
101: TDEDEIELLR GFLDYVTTHR GGSNPPDTAP FYEMIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFGSGK EVLFKSPHDQ STFEISRKIW NRTGKIIGFE
201: MDFEVNGNSP SSNPSAAVEI ESENGVEKRG SRKRSRSRIG KIEEDNNVNV NVNETASAGI GGLIEEIVRS CVSPLIKEVM NGTTSMMMAG SLGPVFTRSL
301: GYGLEGGGGG GNKAVRDERW RKQQILELEV YSRRLELVQE EIRATLHELK TMPSGV
101: TDEDEIELLR GFLDYVTTHR GGSNPPDTAP FYEMIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFGSGK EVLFKSPHDQ STFEISRKIW NRTGKIIGFE
201: MDFEVNGNSP SSNPSAAVEI ESENGVEKRG SRKRSRSRIG KIEEDNNVNV NVNETASAGI GGLIEEIVRS CVSPLIKEVM NGTTSMMMAG SLGPVFTRSL
301: GYGLEGGGGG GNKAVRDERW RKQQILELEV YSRRLELVQE EIRATLHELK TMPSGV
001: MTSDHRDALF SLELESPDPD EGGVADGGES DTDEDLRDND DVVMPGTNEA EAEDDDPEEE DLNSPSTSSL PMVSTISATA VVSGTPTATS STGAVTVALP
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI
Arabidopsis Description
Probable transcription factor At3g04930 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.