Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02423 | Sorghum | nucleus | 96.04 | 95.57 |
| Zm00001d040254_P001 | Maize | nucleus | 74.26 | 75.19 |
| HORVU5Hr1G051570.1 | Barley | plastid | 51.98 | 61.05 |
| TraesCS3B01G200500.1 | Wheat | nucleus | 56.44 | 60.64 |
| TraesCS3A01G165200.1 | Wheat | nucleus | 57.18 | 58.04 |
| TraesCS3D01G176400.1 | Wheat | nucleus | 56.68 | 57.54 |
| HORVU3Hr1G034150.3 | Barley | nucleus | 54.7 | 54.7 |
| Os01t0249900-01 | Rice | plastid | 42.08 | 54.49 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 6.68 | 43.55 |
| EER97613 | Sorghum | nucleus | 34.16 | 36.8 |
| EER92218 | Sorghum | nucleus | 31.93 | 34.22 |
| KRG92750 | Soybean | nucleus | 28.22 | 32.29 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 34.41 | 32.25 |
| KRH34055 | Soybean | nucleus | 28.71 | 31.18 |
| KRG96940 | Soybean | nucleus | 30.45 | 30.45 |
| CDY00009 | Canola | nucleus | 29.46 | 30.2 |
| KRH68705 | Soybean | nucleus | 29.7 | 29.63 |
| CDY21105 | Canola | nucleus | 25.99 | 29.49 |
| CDX80681 | Canola | nucleus | 28.71 | 28.22 |
| GSMUA_Achr10P... | Banana | mitochondrion | 28.96 | 27.66 |
| Bra009986.1-P | Field mustard | nucleus | 28.22 | 27.54 |
| Solyc02g083750.1.1 | Tomato | nucleus | 27.97 | 26.84 |
| CDY50767 | Canola | nucleus | 26.73 | 26.67 |
| PGSC0003DMT400009206 | Potato | nucleus | 27.48 | 26.43 |
| CDY30023 | Canola | nucleus | 25.99 | 26.05 |
| Solyc01g097890.2.1 | Tomato | nucleus | 29.21 | 26.05 |
| PGSC0003DMT400057863 | Potato | nucleus | 28.71 | 25.95 |
| AT5G28040.2 | Thale cress | nucleus | 27.23 | 25.76 |
| CDY41910 | Canola | nucleus | 26.98 | 25.65 |
| Bra040416.1-P | Field mustard | nucleus | 26.98 | 25.65 |
| Bra040116.1-P | Field mustard | nucleus | 22.77 | 24.8 |
| AT3G04930.1 | Thale cress | nucleus | 27.48 | 24.34 |
| KRG92748 | Soybean | cytosol | 21.29 | 24.09 |
| CDY68986 | Canola | nucleus | 19.8 | 23.6 |
| Bra036116.1-P | Field mustard | nucleus | 20.3 | 22.91 |
| KRH34056 | Soybean | nucleus | 20.05 | 21.6 |
| CDX86188 | Canola | cytosol | 27.23 | 18.27 |
| EER96833 | Sorghum | nucleus | 18.56 | 16.97 |
| KXG25358 | Sorghum | nucleus, plastid | 13.37 | 12.41 |
Protein Annotations
| MapMan:15.5.28 | EntrezGene:8072399 | UniProt:C5XFR4 | ncoils:Coil | EnsemblPlants:EES02686 | ProteinID:EES02686 |
| ProteinID:EES02686.1 | InterPro:GEBP | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | PFAM:PF04504 | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF14 | EnsemblPlantsGene:SORBI_3003G112700 |
| unigene:Sbi.19476 | UniParc:UPI0001A84E13 | RefSeq:XP_002457566.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:-:10119395..10121116
Molecular Weight (calculated)
42672.0 Da
IEP (calculated)
4.766
GRAVY (calculated)
-0.368
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDHPHDAA ASSSAGGDED DEGTDTDASN SDLANPQGQD PLPFPDAASV PPHPHPLAPA PEPAGAVPPP QPQPHGPSAD DSRRLFQRLW TDEEELLILR
101: GFLDFTARRG TTFASHQYDT GPFYEEIRRR LSFDFTKSQL IEKLRRLKKK YRVCAARVAA QGAAFAFRSA HEGAIYDVAR HIWRPAFRRG EGGGGSAADA
201: SDEDDINPVA AAAMEDGGGG SASTPTARGR GGRRVRRRTA QELEAPALPL PATSALMITD AAEDRLVVAV ENLVPAIAPP PPLQVPTVSP AAATPSPMPV
301: STGGGATEEA IRSIMSPLLK EFISSVTVAG QTGFGLGLGT GFGGIGGFDI LGLGLGVAGP NPGMPSDDKW RQQQILELEV YLKRIELVRE QVTAALEDLR
401: SSEC
101: GFLDFTARRG TTFASHQYDT GPFYEEIRRR LSFDFTKSQL IEKLRRLKKK YRVCAARVAA QGAAFAFRSA HEGAIYDVAR HIWRPAFRRG EGGGGSAADA
201: SDEDDINPVA AAAMEDGGGG SASTPTARGR GGRRVRRRTA QELEAPALPL PATSALMITD AAEDRLVVAV ENLVPAIAPP PPLQVPTVSP AAATPSPMPV
301: STGGGATEEA IRSIMSPLLK EFISSVTVAG QTGFGLGLGT GFGGIGGFDI LGLGLGVAGP NPGMPSDDKW RQQQILELEV YLKRIELVRE QVTAALEDLR
401: SSEC
001: MASDQRDTDF SAESPDLEED GGGGGGGRGG GETESDEDVV IPEPNEAEDD DHDPDPDPEY EDLNSPSMIS RAPATKSSSG TVTVALPAGS AVPVASIPSD
101: SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK
201: EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG
301: VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE
401: VYSRRLELVQ EQIRATVNEL KTMPNGG
101: SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK
201: EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG
301: VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE
401: VYSRRLELVQ EQIRATVNEL KTMPNGG
Arabidopsis Description
Probable transcription factor At5g28040 [Source:UniProtKB/Swiss-Prot;Acc:F4K5T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.