Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036116.1-P | Field mustard | nucleus | 59.59 | 56.42 |
| CDY00009 | Canola | nucleus | 58.11 | 50.0 |
| VIT_14s0030g01600.t01 | Wine grape | cytosol, mitochondrion | 8.55 | 46.77 |
| CDX80681 | Canola | nucleus | 45.72 | 37.71 |
| CDY50767 | Canola | nucleus | 41.0 | 34.32 |
| CDY21105 | Canola | nucleus | 35.1 | 33.43 |
| CDY30023 | Canola | nucleus | 38.05 | 32.01 |
| AT5G28040.2 | Thale cress | nucleus | 40.12 | 31.85 |
| CDY41910 | Canola | nucleus | 37.46 | 29.88 |
| CDX86188 | Canola | cytosol | 41.3 | 23.26 |
| EES02686 | Sorghum | nucleus | 23.6 | 19.8 |
| Zm00001d040254_P001 | Maize | nucleus | 23.3 | 19.8 |
| KRG92748 | Soybean | cytosol | 20.65 | 19.61 |
| Zm00001d006945_P001 | Maize | nucleus | 21.24 | 19.51 |
| EES02423 | Sorghum | nucleus | 23.01 | 19.21 |
| TraesCS3D01G176400.1 | Wheat | nucleus | 22.12 | 18.84 |
| Zm00001d022266_P001 | Maize | nucleus | 20.65 | 18.72 |
| TraesCS3B01G200500.1 | Wheat | nucleus | 20.65 | 18.62 |
| HORVU5Hr1G051570.1 | Barley | plastid | 18.88 | 18.6 |
| TraesCS4D01G163600.1 | Wheat | nucleus | 18.88 | 18.44 |
| TraesCS4B01G159600.1 | Wheat | nucleus | 18.88 | 18.44 |
| KRH34056 | Soybean | nucleus | 20.06 | 18.13 |
| HORVU3Hr1G034150.3 | Barley | nucleus | 21.53 | 18.07 |
| TraesCS3A01G165200.1 | Wheat | nucleus | 20.94 | 17.84 |
| EER97613 | Sorghum | nucleus | 19.47 | 17.6 |
| EER92218 | Sorghum | nucleus | 19.17 | 17.24 |
| HORVU4Hr1G045570.1 | Barley | nucleus | 17.7 | 17.24 |
| TraesCS4A01G138100.1 | Wheat | nucleus | 17.7 | 17.24 |
| GSMUA_Achr8P22220_001 | Banana | nucleus | 21.83 | 17.17 |
| HORVU2Hr1G027390.1 | Barley | plastid | 18.29 | 16.58 |
| TraesCS2B01G176900.1 | Wheat | nucleus | 17.99 | 16.18 |
| TraesCS2A01G151700.1 | Wheat | nucleus | 17.99 | 16.14 |
| Os01t0249900-01 | Rice | plastid | 14.75 | 16.03 |
| Os03t0370250-01 | Rice | cytosol | 19.47 | 15.98 |
| CDY52323 | Canola | nucleus | 7.96 | 15.98 |
| TraesCS2D01G156800.1 | Wheat | nucleus | 17.4 | 15.61 |
| Zm00001d047421_P001 | Maize | nucleus | 16.81 | 15.2 |
| Zm00001d029287_P001 | Maize | nucleus | 16.52 | 14.62 |
| Os07t0636100-01 | Rice | nucleus | 10.32 | 13.94 |
| CDX89436 | Canola | nucleus | 13.86 | 13.35 |
| CDY68087 | Canola | nucleus | 12.09 | 13.31 |
| GSMUA_Achr10P... | Banana | mitochondrion | 16.22 | 13.0 |
| CDX92682 | Canola | nucleus | 14.16 | 12.97 |
| CDX97966 | Canola | nucleus | 12.09 | 12.5 |
| CDY18747 | Canola | nucleus | 12.98 | 12.32 |
| CDY27657 | Canola | nucleus | 10.91 | 12.17 |
| CDY11061 | Canola | nucleus | 12.98 | 12.05 |
| CDX94469 | Canola | nucleus | 4.72 | 11.85 |
| CDY61958 | Canola | nucleus | 12.39 | 11.57 |
| CDY32382 | Canola | nucleus | 9.44 | 11.35 |
| CDY07275 | Canola | nucleus | 11.8 | 11.17 |
| CDX99698 | Canola | nucleus | 10.03 | 11.04 |
| CDY49787 | Canola | nucleus | 11.5 | 10.51 |
| CDY01140 | Canola | nucleus | 8.55 | 10.51 |
| CDY26346 | Canola | nucleus | 12.09 | 9.95 |
| CDY12911 | Canola | nucleus | 4.13 | 7.25 |
Protein Annotations
| EnsemblPlants:CDY68986 | EnsemblPlantsGene:GSBRNA2T00081971001 | PANTHER:PTHR31662 | PANTHER:PTHR31662:SF6 | ProteinID:CDY68986 | ProteinID:CDY68986.1 |
| SEG:seg | UniParc:UPI0004EEB05C | UniProt:A0A078JTL6 | MapMan:15.5.28 | : | : |
Description
BnaAnng29040DBnaAnng29040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTL6]
Coordinates
chrLK038413:-:1092..2261
Molecular Weight (calculated)
36231.3 Da
IEP (calculated)
4.331
GRAVY (calculated)
-0.521
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSDERDAVE SPELEENGSA GGGGVAGESD SDDDQQVMPD PYVAAAADLN SPLDSATAED TVTVALPSGS SLPAAAIPVD SDPKRRRATE IIHLRPPPPP
101: PIDVSRRLFQ RLWTDEDEIE LLRGFLDYVT CHLEASARVQ QEPVRGEASS AEEEIWNQTG KIIGFEDNNV IDLEEQPSST NVDVDSDNVL EKKGTVSRKR
201: SRSRIGRIDE DNKPISLSDG PTASGAGANE NVAAFGDGRS LGGLIEETVK NCVSPLIKEM MMAAAGGYPG GGGHGMGVLS PMLMAKIGFG GGGGKGGVGD
301: ERWRRQQILE LEVYSRRLEL VQEQIRATLH ELKTMPSGR
101: PIDVSRRLFQ RLWTDEDEIE LLRGFLDYVT CHLEASARVQ QEPVRGEASS AEEEIWNQTG KIIGFEDNNV IDLEEQPSST NVDVDSDNVL EKKGTVSRKR
201: SRSRIGRIDE DNKPISLSDG PTASGAGANE NVAAFGDGRS LGGLIEETVK NCVSPLIKEM MMAAAGGYPG GGGHGMGVLS PMLMAKIGFG GGGGKGGVGD
301: ERWRRQQILE LEVYSRRLEL VQEQIRATLH ELKTMPSGR
001: MTSDHRDALF SLELESPDPD EGGVADGGES DTDEDLRDND DVVMPGTNEA EAEDDDPEEE DLNSPSTSSL PMVSTISATA VVSGTPTATS STGAVTVALP
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI
101: AGSAVPVSVI PVDSDPKWHR MTEIVHQRPP IDDSRRLFQR LWTDEDEIEL LRGFLDYMTM HRGSSSHPPD TAPFYEQIKS KLQLDFNKNQ LVEKLRRLKK
201: KYRNVMSKIS SGKEVFFKSP HDQSTFEISR KIWNQTGKII GFEDNNVMDF EETNNHHNTT NGNYSTFNSP SSNPTLELDS ENGIEKKLTM SSSSVSRKRS
301: RSRIGKIEED NKPVITPSDG PIASNVNLNE AAAVGIGGNL GGLIEETVKN CVSPVIKEMM NGTTSMMMAA MGGGFPGLGG GGGGGGGHGF GSLSPMFTRP
401: FNFGFGVEGG GNKAVADERW RKQQILELEV YSRRLELVQE QIRTTLNELK TMPSGI
Arabidopsis Description
Probable transcription factor At3g04930 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.